Basic Information

Gene Symbol
-
Assembly
GCA_027574885.2
Location
JAODGA020001448.1:1237-2855[-]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-12 1.1e-08 35.5 0.3 1 29 378 406 378 406 0.98

Sequence Information

Coding Sequence
ATGTCGAAAGTAGCACCTTCAAAACGAAAGGCTCCCAGCCGAAGTTCCACTGAAAGCAGCTCAGCTTCTTCATCAGACAGCTCGTCATCAAGTTCCTCATCCAGTGGCTCAGATTCCTCATCCAGCAGTGATACTGACTCATCCTCTTCACAAGCCTCTGCAAAGAATTCCACAACTGAAcaaccaacaacaaaaaagacaGCATCTATCAAAAATGTGCCAAGAAAGAGTGCAGACACCAAGACACCCCCAAATAAAGCAAAGGCCAAACCGACGCCATCAGCAAATAAAACACAGAAAACACCACCCAAGGTTGCAGCTCATTACTCCTCTGAAGATGACAATCctaaaactaacaataaagCAGCCAAAAAGAGGCCACTTGCAAAGGCATTGAAAGCAAGTGTGCCTGCTAACATAAAAAATCCACCTAAAGTCACTGGTGGCAAAGTCCCACCAAAAGCAAATCCAGCTGCAAAGGCACAGCAGGCAAAATTAAAGGATAATGCAAAGACTAAAGTATTACAGAAAAGTGCAACCAAGGTGGATGCCAGTAAGAAGAAGAGTATTTTCTCACCTGAAAACAGCTCAGAGTCTGACAGTAATGAGAAACCTGTTGCAAAAACACAAGCTTTGAAAGCTGCTGCTGTAAAACCTCGCGCAAAAGCGTCTGCAAAGCCAATAGAATCAAAGAAAGGGTCCAGCAAAAAGAACAATGCACCCAAGTCTAAGGAGATCATAAGTTCAGCAAGTTCTACTGCAAGCAGCAGTGAGAGCAGTAGCAGTTCAGAATCAGATAGTAGTGATTCAGGATCAGATTCCAACAAGAAAACAACGCCGAAGAAACAAGTGCGTAAGCCAACTATTAAAGAAGATGCTACTGATTCAGACACGGGTTCAAAGGACGTTAAACAAACACCGCGAAAATCTACACGTACATCAAATGCAAGGAAATCCAAGCATGTTGTTGGTAAAAATGTCTTCACCGATACTGATTCAGATACAGAGAGTACGAAACGATCTCTGAGTCGTTCACCGGTGAAGAAGGCACCTATTGTTACGAAAGGCAAGgcgaagaataagaaaaacgAGGCGAGCAAGCGTGTGGAGGTGATTGTTGCGGAAGATCGAAAGTGTCCGCTGGAGGAGTGCTCGAGCAATGGGCATTTGGGTGGACGACTGGAAAAGCATTTCACGATTGACGCTTGTCCTTTGTACCATAATATGACGGCGGGCAAGTGCGCGGAGATCTTTCAAGACCGGCGAAAGCGCGACGAACAGCGGAAGAAGCTGGTGGATGGCAGTAAGAAGTCCCCGCGGGGCACGGGACCCACGTCCGAGCAGAAGCTCTACGCGCAGAAGATTAAAGAATCGCGCAGCGCCTTCAAAAGCGACAGCGCCGATGAGGGTAAGGTGATTACCGAACGGACGCTAGAGCCCAACCTTGATTATTTCGTACCCGAGTGTGATTTGAAGTTATTCCGGGATGCGCAGGCGATTTCCAGTGAGAAGATCGAAGAAGAGTTGAAGACATTGCCTAATACAAAAGGTATGTTGTCGTAA
Protein Sequence
MSKVAPSKRKAPSRSSTESSSASSSDSSSSSSSSSGSDSSSSSDTDSSSSQASAKNSTTEQPTTKKTASIKNVPRKSADTKTPPNKAKAKPTPSANKTQKTPPKVAAHYSSEDDNPKTNNKAAKKRPLAKALKASVPANIKNPPKVTGGKVPPKANPAAKAQQAKLKDNAKTKVLQKSATKVDASKKKSIFSPENSSESDSNEKPVAKTQALKAAAVKPRAKASAKPIESKKGSSKKNNAPKSKEIISSASSTASSSESSSSSESDSSDSGSDSNKKTTPKKQVRKPTIKEDATDSDTGSKDVKQTPRKSTRTSNARKSKHVVGKNVFTDTDSDTESTKRSLSRSPVKKAPIVTKGKAKNKKNEASKRVEVIVAEDRKCPLEECSSNGHLGGRLEKHFTIDACPLYHNMTAGKCAEIFQDRRKRDEQRKKLVDGSKKSPRGTGPTSEQKLYAQKIKESRSAFKSDSADEGKVITERTLEPNLDYFVPECDLKLFRDAQAISSEKIEEELKTLPNTKGMLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-