Basic Information

Insect: Drusilla canaliculata
Gene Symbol: -
Assembly: GCA_027574885.2
Location: JAODGA020015094.1:1235-3331[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00057 0.076 14.1 4.8 1 23 104 126 104 126 0.97

2 11 0.0014 0.19 12.9 13.6 1 23 132 154 132 154 0.96

3 11 1.5e-05 0.002 19.1 5.5 1 23 160 182 160 182 0.99

4 11 0.00011 0.014 16.4 2.9 1 23 188 210 188 210 0.95

5 11 2.4e-05 0.0032 18.4 2.3 1 23 216 238 216 238 0.95

6 11 9e-06 0.0012 19.8 1.0 1 23 244 266 244 266 0.97

7 11 0.0002 0.027 15.5 4.6 1 23 271 293 271 293 0.97

8 11 2.4e-05 0.0031 18.5 2.3 1 23 299 321 299 322 0.96

9 11 0.00079 0.11 13.6 0.0 2 23 331 352 330 352 0.96

10 11 0.0048 0.64 11.2 6.4 1 23 426 448 426 448 0.97

11 11 7.8e-05 0.01 16.8 4.2 1 23 458 480 458 480 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00057	0.076	14.1	4.8	1	23	104	126	104	126	0.97
2	11	0.0014	0.19	12.9	13.6	1	23	132	154	132	154	0.96
3	11	1.5e-05	0.002	19.1	5.5	1	23	160	182	160	182	0.99
4	11	0.00011	0.014	16.4	2.9	1	23	188	210	188	210	0.95
5	11	2.4e-05	0.0032	18.4	2.3	1	23	216	238	216	238	0.95
6	11	9e-06	0.0012	19.8	1.0	1	23	244	266	244	266	0.97
7	11	0.0002	0.027	15.5	4.6	1	23	271	293	271	293	0.97
8	11	2.4e-05	0.0031	18.5	2.3	1	23	299	321	299	322	0.96
9	11	0.00079	0.11	13.6	0.0	2	23	331	352	330	352	0.96
10	11	0.0048	0.64	11.2	6.4	1	23	426	448	426	448	0.97
11	11	7.8e-05	0.01	16.8	4.2	1	23	458	480	458	480	0.96

Sequence Information

Coding Sequence: ATGTGCGCGACGACGAACTTCGCGTACAACTGGCAGCTGGACCCGCAGAACGCCGCCGAGGACCTGCACAACTACTCCATCCAGAGCGTGCTCGACCCGCAGAAGGTCAAGATCCGCAAGCCGATGTTCTTCATGAAGCCGGAGATGGGGCCGGGCGAGAAGCTCGAGAAGCACCTCATCTCGCCGTACGCCACCGTGCAGCTGACGCCCGAGGAGTACAATCAGATCATCTCGAAGCGGCATGAGGTGGTGCCGACGGCGAAGCCGGAGGGCACCGCGCCCGAGGAGCCCAGTCCCAAGATGCGGCCGTTCGCGTGCAACGAGTGCGGCAAGACGTTCCTCCTCAAGCACCACCTCACCACGCACGAGAAGACGCACTCGGGCATCAAGCCGCACTCGTGCCACCACTGCGGCAAGGCGTTCACGCACAAGCACTGCCTGAACACGCACCTGCTGCTGCACAGCAGCCAGCGGCCGTACCAGTGCGTCGAGTGCAAGAAGAGCTTCACGTTAAAACACCACCTCATCACACATACAAGGGTACACAATCGAGAACGGCCGTTCGTCTGTAAGGACTGCGGCCGAACGTTCCCACTCAAACGACACCTGGTCACCCACAGCAAGTTCCACGCCGGCGAGCGGCCACACATATGCACCGAGTGCGGGGAGAGTTTTGCGCAGAAGGACCACTTGGTGATGCACTCGCGATTCCACGGTGCCATCAACTCGTTTATCTGCCACGACTGCGGCGCGGCGTTTACGCGCAAATTCGAGCTGGTCAATCACAATCGATTGCACGGCAAGAATCCACACTCGTGTCCCATTTGCCACAAGGAGTTTCTGCAGAAACGGACGTTAATCACGCATATGCGGTATCACAGCGGCGAGTTCAACTACTCGTGCACCACGTGCGGCGAGACGTTCCAGTCCAAGCCGGAGCTGACGATGCACACGAAGATGCACCACCAGGAGAGCGAGAGCAAGCCGCTGTCGTGCTCGGAGTGCGCGCTCACGTTCAACTCGCCGGAGGCGCTCGCGCTGCACATCAAGCTGCACAGCGGCGACTCGCTGCTGGTGAACGACCTGTGCACGCTCACCGCCAGCCTGCACCATCCGTCGTTCCCGATGGGCCATCCGGGCGCCAACTACTCGCAGTACAAGCACGTGGTCAACTATCCGGCGGGCGGCGGGAcgggcgccgccgccggcgccgcgCCGAACGCCGCCAAcacgagcggcggcggcaagggCTCCAACGCGCAGAAGGTCAAGCCGCACATCTGCAAGGTGTGCTCGAAGGCGTTCAGCGCCAAGCACGGCCTGCACCAGCACACGAAGCGGCATCCGGAGGGCACGTGCGCGCTCAAGTCGCACATCTGCGACCTGTGCAACAAGGGCTTCTACCAGAAGAACCACCTCATCCTACATCAGCGCCAGCACTTCGATCCGAAGCGCAACGGGCAggtgcagcagcagcagcagcagcaacaacaacagcagcagcagcaacaacaacagcagcagcaacaacagcagcagcagcagcaacaacagcagcaaccGCAAACCGTCTCGGTGCCGGTGGTCGTGTCGCAACAGCAGAAACCCGACGACAAGAACGACATGGGACTGATTAAGCACGAGGTCGCGCAGCCCGACTGCACCCTCTCGGAGTTCTCGTAA
Protein Sequence: MCATTNFAYNWQLDPQNAAEDLHNYSIQSVLDPQKVKIRKPMFFMKPEMGPGEKLEKHLISPYATVQLTPEEYNQIISKRHEVVPTAKPEGTAPEEPSPKMRPFACNECGKTFLLKHHLTTHEKTHSGIKPHSCHHCGKAFTHKHCLNTHLLLHSSQRPYQCVECKKSFTLKHHLITHTRVHNRERPFVCKDCGRTFPLKRHLVTHSKFHAGERPHICTECGESFAQKDHLVMHSRFHGAINSFICHDCGAAFTRKFELVNHNRLHGKNPHSCPICHKEFLQKRTLITHMRYHSGEFNYSCTTCGETFQSKPELTMHTKMHHQESESKPLSCSECALTFNSPEALALHIKLHSGDSLLVNDLCTLTASLHHPSFPMGHPGANYSQYKHVVNYPAGGGTGAAAGAAPNAANTSGGGKGSNAQKVKPHICKVCSKAFSAKHGLHQHTKRHPEGTCALKSHICDLCNKGFYQKNHLILHQRQHFDPKRNGQVQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQTVSVPVVVSQQQKPDDKNDMGLIKHEVAQPDCTLSEFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00631648;
90% Identity: iTF_00084060;
80% Identity: -