Dcan010513.1
Basic Information
- Insect
- Drusilla canaliculata
- Gene Symbol
- -
- Assembly
- GCA_027574885.2
- Location
- JAODGA020028182.1:236-6964[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.83 1.1e+02 4.1 0.4 1 21 72 92 72 93 0.94 2 34 0.027 3.6 8.8 0.1 2 23 100 122 100 122 0.95 3 34 0.019 2.5 9.3 1.5 3 23 128 148 127 148 0.97 4 34 0.0073 0.98 10.6 4.1 1 23 154 177 154 177 0.96 5 34 3.6e-06 0.00048 21.0 2.1 1 23 182 204 182 204 0.98 6 34 0.0026 0.35 12.0 1.5 1 23 280 303 280 303 0.97 7 34 2.4 3.2e+02 2.7 3.1 2 23 391 413 390 413 0.96 8 34 0.0001 0.014 16.4 0.6 1 23 416 439 416 440 0.96 9 34 0.29 39 5.6 0.8 2 19 448 465 447 470 0.89 10 34 0.081 11 7.3 1.1 3 23 474 495 473 495 0.91 11 34 0.47 62 4.9 0.6 3 19 503 519 501 523 0.89 12 34 0.019 2.6 9.3 0.4 1 23 528 551 528 551 0.95 13 34 0.0008 0.11 13.6 5.4 1 22 1084 1105 1084 1105 0.97 14 34 0.051 6.8 8.0 0.1 1 23 1133 1156 1133 1156 0.97 15 34 5.8 7.8e+02 1.5 4.0 1 23 1175 1198 1175 1198 0.95 16 34 0.54 72 4.7 1.5 2 23 1203 1225 1203 1225 0.92 17 34 0.0052 0.69 11.1 0.5 2 23 1390 1412 1389 1412 0.96 18 34 3.9 5.3e+02 2.0 0.2 2 13 1416 1427 1415 1439 0.72 19 34 1.1 1.5e+02 3.7 0.3 1 23 1445 1469 1445 1469 0.93 20 34 0.0033 0.45 11.7 1.2 1 23 1475 1498 1475 1498 0.95 21 34 0.018 2.4 9.4 1.4 1 23 1503 1525 1503 1525 0.99 22 34 3.5e-05 0.0047 17.9 1.5 1 23 1533 1555 1533 1555 0.99 23 34 0.012 1.6 9.9 7.0 1 23 1560 1582 1560 1582 0.98 24 34 0.012 1.6 10.0 1.1 1 23 1588 1611 1588 1611 0.97 25 34 0.00033 0.044 14.8 6.3 2 23 1618 1639 1617 1639 0.98 26 34 0.0034 0.46 11.6 0.3 2 23 1647 1669 1646 1669 0.96 27 34 0.00094 0.13 13.4 0.3 1 23 1693 1715 1693 1715 0.98 28 34 0.023 3.1 9.1 0.1 1 23 1729 1751 1729 1751 0.98 29 34 0.019 2.5 9.3 6.5 1 23 1783 1805 1783 1805 0.97 30 34 0.00019 0.025 15.6 2.0 2 23 1814 1836 1813 1836 0.97 31 34 0.022 2.9 9.1 3.0 2 20 1843 1861 1842 1862 0.94 32 34 0.053 7.1 7.9 2.1 3 23 1911 1930 1910 1930 0.97 33 34 0.00021 0.027 15.5 1.0 1 23 1936 1958 1936 1958 0.99 34 34 0.00096 0.13 13.4 2.9 1 23 1964 1987 1964 1987 0.92
Sequence Information
- Coding Sequence
- GACATGCCCGCATTGGTACAAATTCGAACGGCAACAGCGCACACTGACGAACGACCGACGGTGGTCTATGCCGAGCAAGTCGAGGAAGCAGCGCCACCTACGACACCCAAAGTCAAGGTACCCATCGTGGCACGGAAGCGGCACGACGTGCCCGACTTCTCGGCCACCAACTGCGAGGTGGTGCATCCGAATTGCGACGTCGACATTCTGCACTACAAGTGCGTGCGCTGCGAGCAGCTGTTCATCAACAAGTTTGTCTTTGTGCGCCACATTGAGAAGGGCAAGTGCTACATCAACAGCTGCGACGTGTGTCCGGCGACGTTTGCGAAGAATACGGAGTTTTACAATCACTACGTCACCGCGCACGCCGAGCGCGCCATCTGCAACTTTTGCTTTCGCACCTTCATGTACGAGAAGAACGTCAAGGAGCACATGCTGCGCCACCTGGACCAGTTTCGGCATCGCTGCGAGGAGTGCAACAAGGGCTTCTACACGGTGCGCGAGTACCGCAATCACTATAAGAATCGGCACATGGGCATCAGGCACAAATGCTCCGAGTGTGGGCGCTCGTTTGCGGACGAATACTATTTCAAGAAACACATTGCCACGCACGGTTTGACGATAGCCACtgaaattCGTATTATTTTCAGGTCGGAGGAAGAGGCAAATGTGGACGAAGCGAGCTATGCGAGCTTAAAGGCTCGCTACGGGCTGAAAGAGTGCGTGGTCTTTGTCGGCGAGCCGGCCGACTTCGATCACAGGGTGTTACGTTTTATGCGAACGCAGTCGGTGTGCGAAGTGGACGCGTCCAACATTGTCTCCTCGACGCGCCTCAAGTACAAGTGCGATTCGTGCACGGCGAAATTCCGCGACTATTACAGCCTGTCGCAGCACGTGCAGCGCGAgcacgccgacgacgacgaccgGTCGTCGGTGAGCTCGCAGTCGAGCGCCGAACTCTACGAGCCGGACATTGTGGACGATGATTCGCAGTCGGGCGGGGAGGCGTCCGACCCCGAGGATCGGCTGCGCAAGCTGAAAATCGAGAAgaagccgccgccgtcgaagGCGCGCGGCAAGCGCTCCAAGGTGGGCGGGCGAGCCGCGCGGCCGCTGCCCGCCGTCGAGGAGGACGAGGTGATCATGTGGGAGCAACCGAGTGCGATCAAAAAGTGCCTGCGCTGCATGCAGATCTTCAAGGACAAGCGCCACTACGGCGAGCATCTGAAGACGGTGCACAATGTGTTTGCGTGCATGATGTGCCCGCAGGCGTTCTACTCGGAGTCGAATTTCGAAGCGCACATCCGGAAGGTCCATCACAAGGAGGGCTCCGACAAGTGGCGCTGCAGTCTGTGTAGTCTGTCGTTTGCGGACTTTTGGCACCTCTCGGAGCATAATTTTGCGCAACACCGACCGATGTGTAATCTGTGTCCGCGCGAGTTCCCCGATGTTAAGTCGCTGGTGCATCATAAAACCTATCGACACTTGGTGAACGCGAATGTGATTTGTAAAGATTGTGGATTAACACTTCCGGATACGCAGTCGTTGACCGATCATTGTCTGCAACATGGCTATCTGTATTTCGCGTGCGAATTGTGCGCGGAACGTTTCTCAACCAAAGTCGGGTACCTGGACCATATGTTTAAGTCACACAGTGGCGCCAAACCTAGTGCGCGTGTCCTGCATCTCGACAAGCGACTGAATATTAAAGCTACCAAAACTATTCTGCCTCAGCCTGCAAATGAGGATATAAAACCATCTATACCGTCTCCAATTCCAAGCATTCAACCTGTGGCGGCAGCGCCAATTGTTTCTACGGCTGTTACCACCATTCCTCTAACAGTGCCTGCAACATCTACATCAAACAAGGTACCAATACCACGGTTGGGTagtagtggtggtggtggtaccCGACCCAGTATTCTCTTTGGCGATCCCAACACGACGACCACGCTGGTGCAGGTGCAGAATGCGACCACCGGACAAAAGGAGCACAAGCTGTTGGTCATGGAAAAGGATTCCAGCAAGGCCTACTTGGTACCCACGATGATGGTGAATCAAAATGGGCAGGTGAAGTACGCGGTGCCCGATAATGCGGTACCCGAGCCGGTTACCATCAACAATCCGGGACCCCCTGCGCTGGCGCCAATCATCCAATCGGTCCCGCAGGTGACGCAGCAACCGACGATTGCGAACATCCAGCCTGCGATTGCGCCACAGCCGGTTGGAAGCATTGCGCAGCAGTCGATTCAACCCATTGCTCGACAACCGATCGCCAGCATGCCGCCTGGGATGGCACAACAGCAAATGGCCGGAATTCCTATCACGCAACCGATCACACTCATTCATTCATCGCTTGGTAATCAGCTTGGTGCGGCCGTAGTGCCGCCGGTTGTGTCCAGCGGCGTGCATCCCACCGGTAATCAGCCAACGTTTGTCATGTCAACGCTGCCAAACTCGTCGACGCAGACGCAGGGCCCGAATAATGTAACCTTCCGTTTTGCGAACAGTCTGTCGACTATGGCGTCACCGCGGCCATCGGCGAATATCGCACCGCAGCCGACGAACATGCAAACCACCAATAACatggttttaaataaattattcccTCTTCCTGTAAATCCAATTATGCAACCGAAAATGATGACTATCAGTGGCGCAGGTGCGACATCGTCGTCGACGATCCTGACGAACAAAGTTGGTAAAGTTTCCATTCCACGCGTTGGTACCGGTAAACCACTGCCCAGCAGCAAACAGTATCCTGGTAAGAAGCCACCGACGATCACCACAACGCGTCCGATCAAGATTGCCGCCAAGAAGGATGATGACGTGCGGGAAATGCCTAAGCTTGAGATACAATCGGTTGTGGGCGGCACCAGCGAGGTGGAAAAAGTGATAAATGCTCGTCTAGACGCTGCAGAGCCACAAAAGGAACAAGAAGAACCTGCCCCCGTTCTAAACGCCGAGACCACCGAGGGTGGAAGGCCCAAAATCTTTCTGAAGCCACTCAGTCAACTACTAGAGAAGCCAAATGAcccaacgccgccgccgccacaacCACCCCcatcgtcatcatcatcatctctGCCCACATCATTAGAATCGGTCGTTGTCGATTTGGACGCGGACATCGAACCAAGTACGTCGAACAGTTTAAtctcaaaattatttagtagCATAGATAAAGCAAGTGAGGAGATGGCGGCCAGCAAGGCGCAGAGTAATGTCGCGCACCAGGTGGATGCGCTCTACAAGTGCAACCACTGCTCGTTTCGCTTTAAGAAGCTCAGCAAGCTGCAGCAGCATCAGCGGCGCGTCAAGTGCAGGATGTGCACCGGCTACACCGGCTGCTATCGCGCGATGGACGAGCACTACAAGGCGGCGCACGCGCTCAACTTCCAGTGCATGACGTGCGACATCGCCTTCGACGGCGTGAAGGCGCTGCGCGACCACAACAAGACGACGCACTACTGCAACAAGTGCAAGAAGTTCTACCTGGAGCTGCCCAAGCATCAGGCGCTGCACGTGTGCTTCAAGTGCAACGACTTTGCGTGCACGGCGAAGAGCCTCACGCAGCACTACCTCACCGTGCACAACAGCCCCAACGTCTGCGCGCACTGTCGCATCGAGTTTGCCGAGAGGCGCGCGCTGCACAAGCACAAGATGGACGTGCACTtttgcacaaactgtaactcGCTGAAGGCGGACATGGCGCAGCACAATTATGGGGCGATTGATGCTGTTGCCAGAGGGGTGGATTCAATCGATGAGCGAACGCTGTTGGCGGAgaggaagaggaagaagaaaccCGGCGAAGAGGAGTGGTTGACGAGAGCTAGGCGGGCAGTGAATCGGCAACCGCCACCTCCAGCTAGCGTCAAACGGGAGTTACGATCAAATAAGTCGATTGACATTGACTGGAATGCCTTGGAGAAGAATTTTACTCGGAAGAAGTCTTCAAAACCAAAGGAAAATGATACAGCAGCTGATAATTCCAAAGAACAGactaatattgaaattattgcaatACACTGCGTTGAAGACAGTGAATTCGAAGATGTTGCCTTGGATCTCAGAGTGGAGGCCACTTCAGAGCCATCCAATGAGTCAACCGAAGAGTTTGTACCACCAGAAGAGCTAACAGTGCTACAAAATGGGCTACCTCTAAAGTGTGGAGTATGCCATCGACGATTTACGGATGAAATTCTGTACGTAGGCCACATGCAGAGAGCACATAAAAGATTAAAATGTCTGCTCTGCGGACGGGACTTTAAGATGAGGGTGAAGGCCTACACTGACCATATGGAGAAGGTCCATCGGAAAGATGGCAAGTTTACGTGCAAGGTGAAAGATTGCGACGAGAAACCGCAGTCGATTCGCGGCTTAGAGTTGCACATGCGTCGCCATCGCGGCGATTATCTGCACAAGTGTCCGGATTGCGGCCGCGAGTACTACACGGACATCTCCTACAGGAATCACCGGGAGTCGGTGCACGAGGGCGTGCGTTACACGTGCGAGGTGTGCGGTTCGGTGATTCGCGGCCGGCGACATTACAAGGACCATGTGCGGAAACATGGTGAGACCAATCCGATGACGTACGAGTGCGACATTTGCCACAAGTTTTACAGCTCTCGCACGGGTCTCGTATGGCACAGGCGCATTCACACTGGCCAGAGTTTTGTGTGTCATCTTTGCGGTCACAAATCAACGCAGCATAACGCCTACACGCGTCATATGCAGTCGCACACGGGTGCCAAGGCGTTCGTATGTGACCTGTGCGGCGCGTCGTACGCCTGCAAGGAATCATTCCAGCGGCACTTGAACAAGGTGCACAAACTGCACATGACGAAGAAATGCACGCATTGCGATCAGACATTCCCGTCGCGATACAAACTCCTCCAGCATATGCACACGCACACCGATATTGAGAGGAAGTTGCAGTGCTCATTTTGCGATCAAACGTTTATCGACATTAATTTTCTGCGCGCGCACGTGAATAAGGTGCACATTGAGAAAATCGAGGCGAAGGTGACGCTGCCGAGGAAAAAGCGGCGACGTGTTGCATCGAGCAAAACGTTTGTTTGCTGCGTTTGCAATGAGGGCTTCGCGAGCCCGGAATTAATGCGCGAGCACTATCGCATTCACGAGGAGGGCAGGGAGCAGGAGGTGGCTGCGGCGGCGACGTACATGTGTAATTACTGCAATGGTCTCTTTGCGAATATGGCGGCTTTGAACGAGCATCTGGTGACGCATCGCGCCACCGAATTGTTGACGCAGACTTGCTTGTCGATAACAATGGCGCAAAAGCAGCAGTACATCAAGAGTGTGCAGGCGGTGAAGGGGAGATATCCGTGCAAGTGTTGCGACAAACATTTTGCGCATAAAACCAATCTCGGACAACATCTATTGACGCACATCAAGAGCGAACAGCATCGCATGCGTTGCCGCCTTTGCAAGAAGACATTTGTGAGCTCGTTTCTTGTCACGCGGCACATGAAGACGGTGCACAATGAGGAGAAGATGAAGAAGTGCGACTATTGCGGTGAGAAATTTCGTTTTCTGCAGGCGCTGAAGACGCACAAGTGTCCCAGTGGGTACACGAGTCGCCAGCCGGTGATTTGCGATATTTGCGGCGATATTCTCGGATGTGAGGAGTATTTAAAGTCGCATAAGTTGCGCAAACACGAGGGAGTGAAGTTCGATAAGCGGAGATATCGCAAGTTTGTCTTCTGCGAGATTTGCGGGAAGCAGATGTACAAGGATCATCTCAAGATGCATATGAATATTCATCTGAATATTAAGCCGTTTCAGTGTACGTTTTGTACGAAAGCGTTTGTCTCGAAGGGAAGATTGGACGAACATGTGCGCACGCACACTGGCCACCGACCGTATGTTTGCGATATTTGCGGAAAGGGATTCACGCAGAGACACTGCGTGAAGACACACAAAGGCAGTGTACATGGAAAGGAAGCGATACAAGCTGtgtga
- Protein Sequence
- DMPALVQIRTATAHTDERPTVVYAEQVEEAAPPTTPKVKVPIVARKRHDVPDFSATNCEVVHPNCDVDILHYKCVRCEQLFINKFVFVRHIEKGKCYINSCDVCPATFAKNTEFYNHYVTAHAERAICNFCFRTFMYEKNVKEHMLRHLDQFRHRCEECNKGFYTVREYRNHYKNRHMGIRHKCSECGRSFADEYYFKKHIATHGLTIATEIRIIFRSEEEANVDEASYASLKARYGLKECVVFVGEPADFDHRVLRFMRTQSVCEVDASNIVSSTRLKYKCDSCTAKFRDYYSLSQHVQREHADDDDRSSVSSQSSAELYEPDIVDDDSQSGGEASDPEDRLRKLKIEKKPPPSKARGKRSKVGGRAARPLPAVEEDEVIMWEQPSAIKKCLRCMQIFKDKRHYGEHLKTVHNVFACMMCPQAFYSESNFEAHIRKVHHKEGSDKWRCSLCSLSFADFWHLSEHNFAQHRPMCNLCPREFPDVKSLVHHKTYRHLVNANVICKDCGLTLPDTQSLTDHCLQHGYLYFACELCAERFSTKVGYLDHMFKSHSGAKPSARVLHLDKRLNIKATKTILPQPANEDIKPSIPSPIPSIQPVAAAPIVSTAVTTIPLTVPATSTSNKVPIPRLGSSGGGGTRPSILFGDPNTTTTLVQVQNATTGQKEHKLLVMEKDSSKAYLVPTMMVNQNGQVKYAVPDNAVPEPVTINNPGPPALAPIIQSVPQVTQQPTIANIQPAIAPQPVGSIAQQSIQPIARQPIASMPPGMAQQQMAGIPITQPITLIHSSLGNQLGAAVVPPVVSSGVHPTGNQPTFVMSTLPNSSTQTQGPNNVTFRFANSLSTMASPRPSANIAPQPTNMQTTNNMVLNKLFPLPVNPIMQPKMMTISGAGATSSSTILTNKVGKVSIPRVGTGKPLPSSKQYPGKKPPTITTTRPIKIAAKKDDDVREMPKLEIQSVVGGTSEVEKVINARLDAAEPQKEQEEPAPVLNAETTEGGRPKIFLKPLSQLLEKPNDPTPPPPQPPPSSSSSSLPTSLESVVVDLDADIEPSTSNSLISKLFSSIDKASEEMAASKAQSNVAHQVDALYKCNHCSFRFKKLSKLQQHQRRVKCRMCTGYTGCYRAMDEHYKAAHALNFQCMTCDIAFDGVKALRDHNKTTHYCNKCKKFYLELPKHQALHVCFKCNDFACTAKSLTQHYLTVHNSPNVCAHCRIEFAERRALHKHKMDVHFCTNCNSLKADMAQHNYGAIDAVARGVDSIDERTLLAERKRKKKPGEEEWLTRARRAVNRQPPPPASVKRELRSNKSIDIDWNALEKNFTRKKSSKPKENDTAADNSKEQTNIEIIAIHCVEDSEFEDVALDLRVEATSEPSNESTEEFVPPEELTVLQNGLPLKCGVCHRRFTDEILYVGHMQRAHKRLKCLLCGRDFKMRVKAYTDHMEKVHRKDGKFTCKVKDCDEKPQSIRGLELHMRRHRGDYLHKCPDCGREYYTDISYRNHRESVHEGVRYTCEVCGSVIRGRRHYKDHVRKHGETNPMTYECDICHKFYSSRTGLVWHRRIHTGQSFVCHLCGHKSTQHNAYTRHMQSHTGAKAFVCDLCGASYACKESFQRHLNKVHKLHMTKKCTHCDQTFPSRYKLLQHMHTHTDIERKLQCSFCDQTFIDINFLRAHVNKVHIEKIEAKVTLPRKKRRRVASSKTFVCCVCNEGFASPELMREHYRIHEEGREQEVAAAATYMCNYCNGLFANMAALNEHLVTHRATELLTQTCLSITMAQKQQYIKSVQAVKGRYPCKCCDKHFAHKTNLGQHLLTHIKSEQHRMRCRLCKKTFVSSFLVTRHMKTVHNEEKMKKCDYCGEKFRFLQALKTHKCPSGYTSRQPVICDICGDILGCEEYLKSHKLRKHEGVKFDKRRYRKFVFCEICGKQMYKDHLKMHMNIHLNIKPFQCTFCTKAFVSKGRLDEHVRTHTGHRPYVCDICGKGFTQRHCVKTHKGSVHGKEAIQAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -