Basic Information

Insect: Drusilla canaliculata
Gene Symbol: su(Hw)
Assembly: GCA_027574885.2
Location: JAODGA020022260.1:2162-6151[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 6.5e-07 8.7e-05 23.4 0.6 3 23 151 172 150 172 0.96

2 13 0.0051 0.68 11.1 1.1 2 21 207 226 206 229 0.88

3 13 0.0042 0.56 11.4 4.0 1 23 236 258 236 258 0.99

4 13 0.00047 0.063 14.4 1.7 1 21 264 284 264 285 0.94

5 13 3.7e-07 5e-05 24.1 1.1 1 23 296 318 296 318 0.98

6 13 2.4e-06 0.00031 21.6 0.8 1 23 328 350 328 350 0.98

7 13 4.3e-06 0.00058 20.8 0.5 1 23 356 378 356 378 0.98

8 13 1.9e-05 0.0026 18.7 1.6 1 23 384 406 384 406 0.99

9 13 2.9e-06 0.00038 21.3 2.4 1 23 412 434 412 434 0.95

10 13 2.6e-05 0.0034 18.3 2.7 1 23 440 463 440 463 0.95

11 13 4.3e-05 0.0057 17.6 0.6 2 23 470 491 469 491 0.94

12 13 3.2e-06 0.00043 21.2 0.8 1 23 497 519 497 519 0.98

13 13 5.6e-06 0.00075 20.4 2.4 2 23 526 548 525 548 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	6.5e-07	8.7e-05	23.4	0.6	3	23	151	172	150	172	0.96
2	13	0.0051	0.68	11.1	1.1	2	21	207	226	206	229	0.88
3	13	0.0042	0.56	11.4	4.0	1	23	236	258	236	258	0.99
4	13	0.00047	0.063	14.4	1.7	1	21	264	284	264	285	0.94
5	13	3.7e-07	5e-05	24.1	1.1	1	23	296	318	296	318	0.98
6	13	2.4e-06	0.00031	21.6	0.8	1	23	328	350	328	350	0.98
7	13	4.3e-06	0.00058	20.8	0.5	1	23	356	378	356	378	0.98
8	13	1.9e-05	0.0026	18.7	1.6	1	23	384	406	384	406	0.99
9	13	2.9e-06	0.00038	21.3	2.4	1	23	412	434	412	434	0.95
10	13	2.6e-05	0.0034	18.3	2.7	1	23	440	463	440	463	0.95
11	13	4.3e-05	0.0057	17.6	0.6	2	23	470	491	469	491	0.94
12	13	3.2e-06	0.00043	21.2	0.8	1	23	497	519	497	519	0.98
13	13	5.6e-06	0.00075	20.4	2.4	2	23	526	548	525	548	0.94

Sequence Information

Coding Sequence: ATGGATGGTGAAAACATCCAGATCATTAGCAAATTGGAGCCAATTGAATGTGAAGAAGCTGAGGAAGGAGATGAGGTTGTCCATGAGATTCATGTGGAGAATACTGATGGCAATATGCAGATAAATGCATTTAATGAACATGCTGAGATACATAATGCTggAGAATATGTAACTGAAGATGGCacacaaaaaatcattataacaGAAGCTGGTGAAGCATACATTAGTGAAGATGGTAACACAAGCACAATTTATGTGCAAGAGGCAGGAAATTACAAGACAGAGTATGAGATTGTTGATGAGGTGGAGCATGAAAGTGGAGCTGAATATGAGGAAGCTGAGGAGTATGTGGCTGAAATTATGAGTAATGATGATAGCCAAGATGTCTACACACCTACTGCTCAGGAATTAGAATTTGCTGAGGACAGTGACAAGCTTGAGGAGAATATCTGCACAATTTGTGATAGGTCCTTCAAAACGTCTGCTAGTTTAAAAAGACATATTTCTGTCACACATGgtgatgaagatgaagatccTGATGCTGATGATCCACTGGCCTTTgaagtttgtttatgttgtgGAGAACCAATGGATTCTGCTCATATTAACGGTACGATACCCTGCAAACACTGCGACAAACTCTTCATGCTGCAAACGAACCTCTTCCGCCACAACGCGCTGGAGCACCCGGACGACATTGGCATGTACCGCTGCTGCGAGTGCCTGCGTACGTTCGGCAGCAAGCAGACGATCCGCAATCACATGCAATCGCATCCGCTTGCCAAGCCGTTCTCATGCAAGGCGTGCAATCGCGACTTTACCCGCAAATACCATCTCGATCGGCATGTGATGCAGACGGGCTGCGATGGCGCTCCGCGTAACCAGTACAAGTGCATGGTGTGCAACAAAACCTTTGGCCGGAAAGACAACCTGCGCGACCATCTTCGCGCACATGCCGGGCAgattaagaagaagaagacgttCCCGTGTCCGCATTGCGGTAAGGAGTTTCAGGGGCATGCTCTGTTGGTCGTGCACATGCGCACGCACACAGGCGAGAAACCCTACGCGTGCGATTTGTGTCCAAAGAGGTTTCCATCAAGTGGCGCATATAAGAAACATAGACGGATGCACACAGGAGAGAAGCCTTATCAATGCATGCAAtGTAAACGAAGATTTGCTGCAAAAGAAACACTCAATCGGCACGTGCGCACGCATACAGGTGTTAAGCCGCATAGTTGCTCTTATTGCGGGAAGAGTTTCATCCAGGCGGCGCAGCTACGAGCGCATATTTTCCACCACACCGGGGAAAATGCATTTACGTGCCCGCACTGCAATCGAGCGTTTAATCGTCGCGTGCGCCTCACAACGCACATCAAGTTTGTGCATGAGGGTGCTCAGCCGTTGGAGTGCAACCTCTGCGATCGGACGTTCTTCCGGAAGGAGGATCTCCTACGACATGAATTACTTCACAGTGGTGAAAAACCATTTGAATGCGACACGTGTAAAAAACGCTTCGCCGTGAAAGCCTCGCTCAAGCTGCACATGCTCACACATCGCAAGGAGCAGCCATGCGCGTGCGACGAATGCGGACGTGCCTTCATCCGCCAGGACTGCCTTCTGCGACACATGCGCGCCAAACATCGCGACGTGCTCGAGGATATCATGGCCGCCGCCGAGAAGAAGCGCCTCCAGGAGCAGCTGCTCGCGCCGGCGAACATCAAGAAGGAGATAATGGAGTCGCGCATCTGGACGGAACTCACCCTCACCGACTCGATCAAGGAGCTGCTCAATCTCCTCGTCGATGAGAAGACGCTTACGGCTTTTGGGTGGCCCGACGCGCCTGTGGATAAAATCCTCGATTCGGTCATTCGCCGCTGCGGGCATGAACCGGCAACGAATACCGAATTCGACTACATTAGTCGCATGCGCGAGAATGCGAAGCTTTTATTCACGGTGGTCATCGACGATCAGGCTGTTAAATCTCTGCTTAACAATCAAACCGTTGACGAGGTCATCCAACATGTTCTGCGCTTAGCTAAGAGTGATAATGAAGAGGAAGACGATGATGATGAGATGGAAGAAGGTGAAGAAGTACATGTAATgcaggaggaggaggaggaggcggCGGAAGAAGATGAGGGTGAGATGCAAGTTGAGCATATTATGGGTGATGATGTGGAGGAGGTCATCACTGGTGACACAATCGAAACCAAAATTGAGCATGTGGAATATGAAACTGTGGAGTATCTCGACGAGGAGGCTATGATTGATGAGACGAACGCAGCAGTGGATGCTATCGAGTAG
Protein Sequence: MDGENIQIISKLEPIECEEAEEGDEVVHEIHVENTDGNMQINAFNEHAEIHNAGEYVTEDGTQKIIITEAGEAYISEDGNTSTIYVQEAGNYKTEYEIVDEVEHESGAEYEEAEEYVAEIMSNDDSQDVYTPTAQELEFAEDSDKLEENICTICDRSFKTSASLKRHISVTHGDEDEDPDADDPLAFEVCLCCGEPMDSAHINGTIPCKHCDKLFMLQTNLFRHNALEHPDDIGMYRCCECLRTFGSKQTIRNHMQSHPLAKPFSCKACNRDFTRKYHLDRHVMQTGCDGAPRNQYKCMVCNKTFGRKDNLRDHLRAHAGQIKKKKTFPCPHCGKEFQGHALLVVHMRTHTGEKPYACDLCPKRFPSSGAYKKHRRMHTGEKPYQCMQCKRRFAAKETLNRHVRTHTGVKPHSCSYCGKSFIQAAQLRAHIFHHTGENAFTCPHCNRAFNRRVRLTTHIKFVHEGAQPLECNLCDRTFFRKEDLLRHELLHSGEKPFECDTCKKRFAVKASLKLHMLTHRKEQPCACDECGRAFIRQDCLLRHMRAKHRDVLEDIMAAAEKKRLQEQLLAPANIKKEIMESRIWTELTLTDSIKELLNLLVDEKTLTAFGWPDAPVDKILDSVIRRCGHEPATNTEFDYISRMRENAKLLFTVVIDDQAVKSLLNNQTVDEVIQHVLRLAKSDNEEEDDDDEMEEGEEVHVMQEEEEEAAEEDEGEMQVEHIMGDDVEEVITGDTIETKIEHVEYETVEYLDEEAMIDETNAAVDAIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -