Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_027574885.2
Location
JAODGA020059201.1:855-2180[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1 9.9e+02 0.6 0.0 8 43 23 58 21 60 0.85
2 3 1.2e-06 0.0012 19.6 0.0 4 36 282 317 279 320 0.86
3 3 1.8e-09 1.8e-06 28.6 0.1 3 43 362 406 360 409 0.89

Sequence Information

Coding Sequence
atgaaagttttaatttataccgGACTGATTTTGTCCGCGTTGACGACGTGCCACTGCTGGGACAATGAGCAACTGGAGGTGTTTGATGTGGTTGAGGAGGTCAAGGAGAATTTCTATGAAATGCTGAGTTTATCCAATaatgCAACAAGTAAAGAAATCAAATCAGCCTTCAGAAGACTGTCTCTTGTCCTACATCCGGATAAAAACCCGCATGAGGATGCAGCAATGCAATTTCGGAATCTTGTGTCCGTGTATGAAGTGCTCAAAGATGAGAAAAAACGCGCTTACTATGATGATGTGCTTGTTAATGGCATGCCGAACTGGAAGTCGGCAATGTTTTACTATAGGAGTGTGAGGAAGATAGGTCTCTTTGAAGGGGCATTGATCCTCTTTGGTATTATCACAGTTGGGCAGTATCTGGTCGCATGGGCTGCCTATGCGGAGAAGTTGTTTACTTTGCAGCAGGTTGCAAAGCAGAGAAAGGGCAAGAAGAACAGTCAGGGAGCGGTGATTGTTGAGATGCTTGCCAAACCCTCTGTGCTCCACACGCTACCATTCCAGATTCCATATTGGAGTTATCAGTTGGTTGTCTCAATACCAAGTTTTGTGATTCTAACCAAAGATTTGGTCAATGAGAGGATTGAAGAACGACGCGAGGCGGCCGCGCAGGCACTCAAAGAGGAGCAGGAGGAAGAGGAGGCTGCCGCATGGAAAGCTACTcaatcaaaaaagaagaagaagacattTGCGATTCCGGAGGGACCAACGTTTGAGGCAAACTATGGTGGTGGTTCTGCTAACACAGAGAATACGGTAGCGCCACCGCCAATAAGCGGCGGTTTCTGGTCCGATGACGATCTCGATGAGTTGGTGAAACTCGTCAAGAAGTATCCGGGCGGTACGGCCAAGCGGTGGGAGGTGATCGCCGAGTGTATGAATCGCTCCGTGGGTGAGGTGACGTTCATGGCGAATCGCATGAAGACGGCGATGCTGCGCCAACCTGCGGAGGAGGAGCCGATCGCCGAGGAGAAGGTTAAGGTGAAGACGAAGGGGGGGAAATTGAAGGGCGCCGTCGAGGAGGCGGCGTGGTTGCAGTCGCAACAGAGAGCGCTTGAGGATGCGCTGGCGAAGTTCCCCAAGGGCGCCGCGGATCGATGGGAGCGCATCGCCGAGCTGGTGCCCAACAAGACGAAAGAGGAGTGCATGCTGCGGTATAAGCATTTGGTTGAGGTTATAAGGAAGCAGAGGGGGGTTAAAGAGGAATAA
Protein Sequence
MKVLIYTGLILSALTTCHCWDNEQLEVFDVVEEVKENFYEMLSLSNNATSKEIKSAFRRLSLVLHPDKNPHEDAAMQFRNLVSVYEVLKDEKKRAYYDDVLVNGMPNWKSAMFYYRSVRKIGLFEGALILFGIITVGQYLVAWAAYAEKLFTLQQVAKQRKGKKNSQGAVIVEMLAKPSVLHTLPFQIPYWSYQLVVSIPSFVILTKDLVNERIEERREAAAQALKEEQEEEEAAAWKATQSKKKKKTFAIPEGPTFEANYGGGSANTENTVAPPPISGGFWSDDDLDELVKLVKKYPGGTAKRWEVIAECMNRSVGEVTFMANRMKTAMLRQPAEEEPIAEEKVKVKTKGGKLKGAVEEAAWLQSQQRALEDALAKFPKGAADRWERIAELVPNKTKEECMLRYKHLVEVIRKQRGVKEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-