Dcan000848.1
Basic Information
- Insect
- Drusilla canaliculata
- Gene Symbol
- -
- Assembly
- GCA_027574885.2
- Location
- JAODGA020002206.1:1230-2363[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-10 7.7e-07 29.3 0.1 5 42 1 38 1 41 0.89 2 2 5.1 1e+04 -3.0 0.1 22 28 152 158 152 158 0.93
Sequence Information
- Coding Sequence
- ATGAGGAAAGCTATAGAAGAAGTACGATCGAATAAATCAACTCTAAGCCGTGCAGCCACAACGTACAATGTCCCATTGGGTACACTCTATCGCCACTATAAGAATGGAACAACCGGAAAGAAGTTAGGACGGTTCCGACCTGTTTTTTCAAATGAACAAGAGATTGAACTTAAGAAATACCTTAAAGCAATGGCCACAGGATTTTACGGTTTGAGCATATCCGAGTTCCTTGAGGTTGCTTATCATTATGCCGAAGCTAATGCAATTGCACATCCGTTTAAAAATGGGAAAGCTGGCGAAGATTGGTTGCAAGGTTTTCGAAGAAGACATCCCGATATATCGCCGCGTAATTCTGAACTAACCTCTATTACCAAAGCCGAAGGGTTAGATAAAGTGCAAGTTAATCGTTTCTACACCTTGCTTCATGAGATGATAGAGAAGCATAATGTTGATGCCAGTCGGATATATAATATTGATGAGATAGGGATTGGTGTACAAGGTCTTTCCATTCGTAGGGAAAGTCCAATTGAAGATGTGACTACAAAGAGTGGCCAATTAACAACGGTGTTGTGCTGTTGTAATGCAACAGGATCGTACATCCCtccgttttttgtttttgccagGGAACGAATGCTGGATAACCTTTTAGATGGAGCATCTCCTGCTTCACAAGCAACATTCACTGATGGTTCGATAGACGGTTTCACGTTTCTAACCTGGTTGAAATTTTTCGTAGATAATATTCGTACTACAGAAGAGAGGAAAGTGTTGCTTCTGGTGGACAATCACGAATCACATAAATATTTCCCTGTCTTAGAATATGCTTCAAAGAATCATGTTGTGTTTGTGTCTTTTCCACCACACATCACACACAAGACGCATCCCTTAGATATTAGTGTTTATGGTTCTTTAAAGATGCTGTTTGAACAAGAGCTAAGCAGCTTTCAGGAGGGACATGTTGAAAGTGTTGTAAACCAAAGAGATGCGATTAGGATATTTTCGGCTGCGTATTTGAAGGCTACAAACGTCCATAATACTGTGAAAGGTTTTGAGATGAGTGGAATATGGCCGTATAATCCTCAAGTTTTCAATGAAAATGACTTTCTGACAGCTTCAATTGGAAATCAGCAATAA
- Protein Sequence
- MRKAIEEVRSNKSTLSRAATTYNVPLGTLYRHYKNGTTGKKLGRFRPVFSNEQEIELKKYLKAMATGFYGLSISEFLEVAYHYAEANAIAHPFKNGKAGEDWLQGFRRRHPDISPRNSELTSITKAEGLDKVQVNRFYTLLHEMIEKHNVDASRIYNIDEIGIGVQGLSIRRESPIEDVTTKSGQLTTVLCCCNATGSYIPPFFVFARERMLDNLLDGASPASQATFTDGSIDGFTFLTWLKFFVDNIRTTEERKVLLLVDNHESHKYFPVLEYASKNHVVFVSFPPHITHKTHPLDISVYGSLKMLFEQELSSFQEGHVESVVNQRDAIRIFSAAYLKATNVHNTVKGFEMSGIWPYNPQVFNENDFLTASIGNQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -