Dcan015818.1
Basic Information
- Insect
- Drusilla canaliculata
- Gene Symbol
- -
- Assembly
- GCA_027574885.2
- Location
- JAODGA020042796.1:1-1960[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-16 5.2e-13 49.1 0.0 2 42 218 259 217 262 0.89
Sequence Information
- Coding Sequence
- GTACTTGCATCTGAATCTGGCTGGACTGCTGAGAATCAGAGGCAATCTTTATCACCATCATCTTGTCCTCTTTCACCTGCAAGTAAAAgAAAACGATTAAGAAAATCATCAACAGGTTCCGGCTCTACAGAGAAACACACAAGTGAGGAACATTCCTCCACCGAAGTGACGCTCTCTTCCCCAGGATTCGCCGTCATCAAGCCGGATGCCAATCTCTCCAGTAATCCCAGCACACCCGTCAAATCCAGCCCTAGAGATAGTCACTCAGGTTACTATGAATCTACCGAAACACCGTCTCCACAACAAATAAATCTACACATACCACAAGAGATACCTGTGCCGCGGACAGTGGAAAACACAGTTGAGATGTCAGCCACCTCGACGGCAGCACAATCGCAGGCAGTCACAGGTTACCAATGGGGCGTTGTCGACCAACACTATCCACACTATACCCAAGCCACCCTCACCCTTCCGCAGGCAACGGCGTACAGcggcgcgctgccgccgccgccgcccccgccgacGTATACGTGCttgtcgacggcggcggttaGCGTGACGACGATCGCAGCCGCTGCGCCATCTACAACAACGCCGGCGGCGCCGCCGCCCACGGCGGGCCGGCGCAAACGCACCGCGAATCCGCAATCGCAGGACAATTTCATGCGCGCGCTGGAGGCGGTGCGCGTGGGCGACATGGGCTTTTGCAAAGCGGCGCGCATCTACGGCGTGGGCAATCGCACGCTGTGGATGGAGTACCGCAAGCGCGGCTATCCGATGCACGAAAAGAGCATCCGAGGTCGGCGACCTCCGCC
- Protein Sequence
- VLASESGWTAENQRQSLSPSSCPLSPASKRKRLRKSSTGSGSTEKHTSEEHSSTEVTLSSPGFAVIKPDANLSSNPSTPVKSSPRDSHSGYYESTETPSPQQINLHIPQEIPVPRTVENTVEMSATSTAAQSQAVTGYQWGVVDQHYPHYTQATLTLPQATAYSGALPPPPPPPTYTCLSTAAVSVTTIAAAAPSTTTPAAPPPTAGRRKRTANPQSQDNFMRALEAVRVGDMGFCKAARIYGVGNRTLWMEYRKRGYPMHEKSIRGRRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -