Dcan024789.1
Basic Information
- Insect
- Drusilla canaliculata
- Gene Symbol
- -
- Assembly
- GCA_027574885.2
- Location
- JAODGA020066555.1:1552391-1553760[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3e-13 4.6e-10 39.7 0.0 1 39 156 195 156 199 0.90 2 4 6.8e-13 1.3e-09 38.2 0.1 1 39 210 248 210 251 0.95 3 4 1.5e-19 3e-16 59.5 0.0 1 45 265 310 265 310 0.98 4 4 7.4e-17 1.5e-13 50.9 0.1 1 39 317 356 317 359 0.95
Sequence Information
- Coding Sequence
- ATGAGCAGTAATGCTCTGCTATCTGGTCAATTGCTATTCTCGCAATTTGGTGTGGACAATGAAGACTTCTCACCAGATCCCCCAGCTCCGATGGCGATTCCCGTCGGCCACGTTGAGATGCAAGAACATTCACCTACTCGGACACTACTCACGAATTCCTCGTTACATCGGACAGATTTGTCAAGTCCTCAGCTGAAGGTCTCTGAGATTAAGCGAGAAATCAAATTCGAGACGTTGCGATCGTCATATGAAGGCGACTCCCTTCTGGACATTGACAGTCATATGTCGGCGCATTCCATGGACAGTCATGATGGGCAGGATCCAAATTCACAGACGACTATGATGATCACTCCGGAGTTAACGAGTTTAATGCCGCTGGGGACGATTAGCGATCATAGCATCAAGTCCAATGGGCTTTCAGACCATTCACATAGTTCACGACAAAGTGGTGGACCCAAAACATGGACACAGGAGGATATGGAGAGGGCATTGGATGCTCTTAGAAATCATAATATGAGTTTAACTAAGGCATCATCAACTTATGGCATTCCATCCACGACATTATGGCAGCGCGCACATCGGCTGGGCATCGATACACCAAAGAAAGAAGGTCCGACGAAATCGTGGACTGAGGAGAGTCTCAACTGTGCGCTGGAGGCGCTGCGCACCGGCACAATATCCGCCAACAAAGCGAGTAAAGCGTACGGTATTCCCTCAAGCACATTGTATAAAATCGCCCGGCGCGAGGGCATACGCCTCGCGGCTCCCTTCAATGCCGCCCCCACGACGTGGACACCGGAAGATTTAGAGAAAGCCCTCGAGAGCATACGCTCCGGCCAGACATCCGTGCAGCGCGCGAGTACAGAGTATGGCATACCGACTGGTACGCTCTACGGGCGGTGTAAACGCGAAGGTATCGAGTTATCGCGATCGAATCCGACGCCGTGGTCGGAGGACGCGATGGGCGAGGCGCTCGAAGCGGTGCGCCTCGGCCACATGTCGATTAATCAAGCAGCGATCCATTACAATCTACCCTATTCGTCGCTCTATGGGCGATTCAAGCGCGGCGCGAAATACGACTCGGATTCGATGGATCTGAACGTCGACACGCACTCACAGCACGACGGCTCGCAGATGATGCTTGATTACGCGAACTCGCATAACTCCCAAGTACAATATCACAATCATACAAATAGCTGA
- Protein Sequence
- MSSNALLSGQLLFSQFGVDNEDFSPDPPAPMAIPVGHVEMQEHSPTRTLLTNSSLHRTDLSSPQLKVSEIKREIKFETLRSSYEGDSLLDIDSHMSAHSMDSHDGQDPNSQTTMMITPELTSLMPLGTISDHSIKSNGLSDHSHSSRQSGGPKTWTQEDMERALDALRNHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNCALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGAKYDSDSMDLNVDTHSQHDGSQMMLDYANSHNSQVQYHNHTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -