Basic Information

Gene Symbol
ARID4B
Assembly
GCA_027574885.2
Location
JAODGA020001251.1:3885-9988[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.5e-29 2.6e-25 89.2 0.5 1 89 293 378 293 378 0.96
2 2 5.3 2.1e+04 -3.4 0.0 22 45 904 929 887 934 0.56

Sequence Information

Coding Sequence
ATGCAAGGAGACGATCCTCCTTACTTGCATGTTGGTACTGCAGTCAGTGCAAAGTATAAAGGAGCATTTTGTGAAGCCAAAGTCAGTAAAGTTGTTAGGATTGTAAAATGCAAGGTTACATTCAAAATGGGCCTTGGCACAGCCACTGTGAGTGATGATGCTGTAAAAGGTGCACTCAGAGTTGGTCAGCTTGTGTCAGCAAGACATCCAGAAAGAAAAGATTATATTGATTGTACAATATCCAAGATTCAAGATTGCAGTCAGTACACTGTTGTATTTGATGATGGAGACATAACTACACTAAGAAGATCAGCGCTGTGTTTGAAGAGTGGTAGGCATTTCAATGAGAGTGAAACACTGGATCAACTTCCACTGACACATCCAGAGCATTTTGGCAATCCTGTTATGGGTGGCAGGAGGGGTAGAAGAAGTCGTCAGCTAAAGGAAGATAGTAGTGATGGTGAAGGTGAGGAGGAAAATGAACCAGATTTGGAGATGTACACTGCTGATATTGGGCGAGTTGTGGTAATTGAGGGATCTgacaagaagaaaaacaaagacaattggTTTCCTGGATTAATTGTCATTCCTTCAGCTCAACCAACAGTGCGTATTAATGTCAAGGATGAGTTTCTTGTGCGATCGTTCCGTGATGGCCGTTACTACACTGTGCCAAAGAAGGAAATCATGGAGTTTAAGCGTGAGTCGCGGGCGGATATGTCCTGCCTAAAAGAAGCCATCGAGAAAGCTCTGCGTTATATGGACCATGATGAGTTACCGCCGTATTGGGAAAGAAACTCATTGTTTAGCTCACAGAATCAGATGTCAGATTCTGATGAGAATTATAGTGATAGCTCTGATGATGAACCTACTGAAGAAAAGGATCACTTTGTCGCTCAACTGTATAAATTCATGGATGATAGAGGTACACCACTGAACAAAACGCCAACTATTGCTCAGAAGGACGTTGATTTTTACAAACTGTTTCGATTGGTGCATAAAATGGGTGGTTACAATCGTGTATCTAATAAAAAGAAGTGGAAATCAGTCACAGGTCGTCTGAAACTGCCCCAAACACAAAGCGCGTTCAACCAAGTAAAGCAAGTATACAAGAAATGCCTCTTAAGCTATGAAGGGTTTTATAGAACATTAGGTTGCACAATGCTGAGTCCGATTCGACACGCAAAGAAGGACAGGGGCCGGCCGTTGATTCGAGACAAGGATCGTATGACGCCTGTTCAGAGTCCCAAACCTGATGAAAAGAAAGATAGGGAGGATGAAAGTTCTGAAGCACAGAAGGAAAAGGACGAGGATGCTAAGGATAAGGATAAGGAGgtgaagaagaaagaagatgaTATGACTGCAAAAACAACGAAGGTGAAAAAACCTGAACGTAGCGACAAACCGACCAAGTCAGAAGATAAGGATGATAAAGAGAAAAGGACTGTGAAAAAAGAGCTTTTACCAGAAAGTAGTGATAATAGTAGTGATGCAACTGATCAATCAGAGATAGCAGGACCATCTAGAGAACCTGGTAGGCCGAAGAGAACATCTGAGAcgaaaaaggagaagaagatgCGGCCTCCAGCTGGAGACAAAGTAAAAGCCTTAGTTGAGAAGTTTGAAGAGCAGTCAAAGCTGTTCAAAAGTGACAAAGAGAAGGATAGATCTAAAGATGAGgacaaagaaaaagacaagGAGAAGGAAAGGGAGAAACAATCTCAACAAACCCGGTCCAAGTCTTCACAGGTGCTTAAAGTTAAAGACAAAGATAAggataaagaaaaagagaaggaaatGTCTCCAGAAAGTCGTTCTCAAGATATGAAGACGCCTATTAAAGACCGAGATGCGAAGCCTTCTATGAGGACCACGAAGAAGTCATCATCAGACGATGATAaggataaagaaagaaaacgtGGTCGAAAACGTGCTactgaagaaaaagaaaagacaaCCAGTGATTCATTGGATACACCATCAACTCCCAGTACAAAAGGTTCAGTAAGCATTGGGGATAAACTGAAAGTTTATTATGGGCCGACTCATGAATCAAAAGTCACATATGAAGCAAAGGTAATTGAAATTGATAAGGACGGTGGTGGACAGTGTATGTATCTCGTTCACTATACGGGATGGAATAATCGTTATGATGAGTGGATCAATGCGGGCCGCATTGCCGGTAATTTAAGCGCGATGACGAAAGCGAAACGATTGAAGCAAAATGCGTCGTCTCCTCCTGCAGGTGTGAAGTCCAGTCCCAAAGTACCAATTAAGCGAGGTAGAGGAATGTCTATAACAGGACGCAGCACCGTGCAGGAGACGCCACGCTCGACGACGCCTTCAAGTGTCACATCTTCGTCAAGCCGTACCAAAAGTCCGGCAACACCAGTTTCGAGGAGTCGTAGCACGCGCCATGGAGAAAATACGCGACGAACTCGTCGAACATCGGCACATACGGATGTATCCATACATTCAGATTCCGAATCGGATGATGATGATCGCACTGAGAGTGATGTTGAACTGACGCGTACGCGCAGTGGCATTAAATCGGAAGATaatgaaactaaatttaagaGGAAATTAATGAAAACCAAGAGCGAGAAACGCAAGGACGATGAAGATACGGAAAAGGAAGATGATGACAAGgagaaacctaagaaactgaaaaaatataaaaaagttgccgaaattaaATCGGACAGTGAAGACGAGCCAGTTCTTAGTACACATGCGACTAAAGGACGGGATTTTGATCTTTTGCAAATTCGAAATGAGTTAAAAGGTTTTCGAAAAACAGAAATTCCATCCACTTCATCCACTGATACTATCGAAAAAGACACATGTTCATCATCAGATGACTCTGCATCCGCTGAAGTTAAGGCAGAACCTGTAAAACTGGGCGACGTTCAACTTGATGAGAAAAAGGATAAACTGATGGAAAAATCCTCTAGTTCTGATGATATTTATGAGTTTAAAGAACCTGAACCTTTTGAGTTTGGCAGTCGAAAGATTGTTGATGATAAGAATAAGAAGAGAGTGTCTAGACTCTTTGAAGAGGTCGAAAAATCACCGCCCAAAAAGAAATCACCTACTAAACCAGAGCTCGAATCACCGAAGAAAGATGATGCTGAAAAGAAGAGATTCAGGAAATTATCTCAATCACCCAAACCAAAAGAAGTGGAAGTGCAAGAATCTTGTCATTCTCAGCAACAACCAGAAGAAATTGAAGTTAAGAAGGAAATTAAAGAAGAGACgaaaaatgtgcaaattttGGATGATCCATTTGATAAACTGGTGGAGTCGCCATCTTTTCATGTTGGAAAATCAACCACAACTACAccagaaaaacaacaattggAAAAACCAAAAATGGAAGTAATCCCATTGGAAGATGCTACAAGTGTTTTCGATGCACCTGATTTTAATGAAGAGAATAGTGACGATCGTCTAGATTTATCCGACATTGAAGAGGAGAGTTCTAAAAGTCAACTTAGTGGGACCTATACAACACATACGAGTCCAATATTCACAGATTTTGGTACAACTTCTCCCAATCATATCAGTGAAGCGGCTTGTGATAGCTTTAGTATCTCTAAGGGCAAGGACATGAAGCAGAAAGACAGTGAAGATGATGAAGACTCTAATCTACAAGCGTCTATTCAGCGAGCACAATCAACTCTCACAAATCTATTGGATTCTAGTCCGATCGAATCGGATTTGCCGAAAATTGAGACAACAGCAATTACGTTATGTCGTGTTGAAGCTGAAGATGTCGAAATGGAAATAGTTGAAgaggaaaaggaaaaaatcCAGCTTCCCAAACAGATTTCCGCCGTTTTTCAGGAATCTGATAGTTCGATTCTTGAAGATTTGTACAATCCACCTCCGATCATCGCTACGAAAGTAGAAGACATTAAAGAGCTTAATGTGAAGACTGGTACAAAGATTGCTGATTCGATTTtgcaaaaactaacaaaaaatatggaGTCTTCACCACCAAAACCTGTGCAGATAGAAGAGGTCGCACCGCTTCTAGTGCCTGTAATTGTTACTGAAGGCATACCGAAAATGGAGGAACCACCTGTGTCTGAAGAAAAAATTGAGACGAAGATTATCACATTGATTGATTGTCAGGCTAAACCCAGCAAACCTGAGACGAAGTTGATTTCAAAGATTGAGTCTAAATCTGATCTTTCTACACCAATAAAGGTAAAACCTGAGGTAAAGCCTAAGTCTCTTGCTGTTAGGAAAACCGAACCCGAATCGAGAAAGCGTagttataaaaagtttgttagTCCTGAGTTTATAGACAGTGATGATACGGACGACAGTGATTCGGACAATCGTCTTGTGATTGCTCGCTCTGACGATGAATCAGACTCTAATTCTTCGTCGGATAAACAAGAGCCCGAAACGAACACGCCCATCGAAACAAAAGTAATTAAGCTTCTCGACGAAGAAGCTTTGGAGGAGCGTAATTTCAACATTAACGAATGCAAGCTTGAATACAAGGAGGATGAGGTTAAGACTGAGGAGACCGAGGAAGACTTGGTCCCCGAAGATGAGGATGAAATCAAGGAGGAGGAACCTGATGCGCAATTGCATTCGACATTGTTGTGTGAAGAGACGTTTCCTGGCAGCCCGGCGCCTGCACCTACTGTCGATGTAGTTGTACCACCAGTCAAGAGCAAACCAAAAGCAATCATGGAGATGCCATTTGCTAGCGCACCAAGTAGTAGCAATAGTAGTAAGAATGTCATTATGCAGCAGGAGAAGCAGGCCTCACCTGGACCAATCATTATTCCCATGGCAAATAATTCCAGGGATGTTAATACAGTTTTAGAAAACACTCCGCCGACAACGCCTGAAAGtacaattagtaatttatcTCCTCGAGGAGAAATTGGTGGTTTGTCACCCAATAACGCCGACAACGAAAGTTGCAAATCGACTGAGGCAGAAAACGATTACTCTACAAGAGGCGAGCAGAGACGGGCTGCAGCATCAAAGATAACAAACTATAGCGAAGAAGATTCTCTAAATTGTGAGCCTCACACTAGCTCGTCGAAGAAGCGCGACGAACTTCTCCCTTCGCCGTGCAAAAAGCGACGGCGTTCATGCAAAGGCGACGGTGACACTGTGCCGGTGGCGGCAAAACGCGGTCGCAAGCCGAACCGATCGCGACACAATAGTGACAGTGACGACACGTCTGAGCATTCGCTACATGCGATTATGACCAATTTTGAATCCCGTCTCACGCGATCTCCAAGACCGCAGAAGTACAATTTCTACGTTGAATTAGatccAAACCTGGATAGTGCAGCTCGAATAGCAGTATtactacaaaaattacaagacCTACGGAAGACGTACGCGGATGTAAAGGCTGAATTGGTAACGATAGAGAGGCGAAGAAAGAAAATTCGGCGACGGGAACGTGAAGCACTGAAAGCAGCTAAACAAGAACTTGCCTGTACATAA
Protein Sequence
MQGDDPPYLHVGTAVSAKYKGAFCEAKVSKVVRIVKCKVTFKMGLGTATVSDDAVKGALRVGQLVSARHPERKDYIDCTISKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVMGGRRGRRSRQLKEDSSDGEGEEENEPDLEMYTADIGRVVVIEGSDKKKNKDNWFPGLIVIPSAQPTVRINVKDEFLVRSFRDGRYYTVPKKEIMEFKRESRADMSCLKEAIEKALRYMDHDELPPYWERNSLFSSQNQMSDSDENYSDSSDDEPTEEKDHFVAQLYKFMDDRGTPLNKTPTIAQKDVDFYKLFRLVHKMGGYNRVSNKKKWKSVTGRLKLPQTQSAFNQVKQVYKKCLLSYEGFYRTLGCTMLSPIRHAKKDRGRPLIRDKDRMTPVQSPKPDEKKDREDESSEAQKEKDEDAKDKDKEVKKKEDDMTAKTTKVKKPERSDKPTKSEDKDDKEKRTVKKELLPESSDNSSDATDQSEIAGPSREPGRPKRTSETKKEKKMRPPAGDKVKALVEKFEEQSKLFKSDKEKDRSKDEDKEKDKEKEREKQSQQTRSKSSQVLKVKDKDKDKEKEKEMSPESRSQDMKTPIKDRDAKPSMRTTKKSSSDDDKDKERKRGRKRATEEKEKTTSDSLDTPSTPSTKGSVSIGDKLKVYYGPTHESKVTYEAKVIEIDKDGGGQCMYLVHYTGWNNRYDEWINAGRIAGNLSAMTKAKRLKQNASSPPAGVKSSPKVPIKRGRGMSITGRSTVQETPRSTTPSSVTSSSSRTKSPATPVSRSRSTRHGENTRRTRRTSAHTDVSIHSDSESDDDDRTESDVELTRTRSGIKSEDNETKFKRKLMKTKSEKRKDDEDTEKEDDDKEKPKKLKKYKKVAEIKSDSEDEPVLSTHATKGRDFDLLQIRNELKGFRKTEIPSTSSTDTIEKDTCSSSDDSASAEVKAEPVKLGDVQLDEKKDKLMEKSSSSDDIYEFKEPEPFEFGSRKIVDDKNKKRVSRLFEEVEKSPPKKKSPTKPELESPKKDDAEKKRFRKLSQSPKPKEVEVQESCHSQQQPEEIEVKKEIKEETKNVQILDDPFDKLVESPSFHVGKSTTTTPEKQQLEKPKMEVIPLEDATSVFDAPDFNEENSDDRLDLSDIEEESSKSQLSGTYTTHTSPIFTDFGTTSPNHISEAACDSFSISKGKDMKQKDSEDDEDSNLQASIQRAQSTLTNLLDSSPIESDLPKIETTAITLCRVEAEDVEMEIVEEEKEKIQLPKQISAVFQESDSSILEDLYNPPPIIATKVEDIKELNVKTGTKIADSILQKLTKNMESSPPKPVQIEEVAPLLVPVIVTEGIPKMEEPPVSEEKIETKIITLIDCQAKPSKPETKLISKIESKSDLSTPIKVKPEVKPKSLAVRKTEPESRKRSYKKFVSPEFIDSDDTDDSDSDNRLVIARSDDESDSNSSSDKQEPETNTPIETKVIKLLDEEALEERNFNINECKLEYKEDEVKTEETEEDLVPEDEDEIKEEEPDAQLHSTLLCEETFPGSPAPAPTVDVVVPPVKSKPKAIMEMPFASAPSSSNSSKNVIMQQEKQASPGPIIIPMANNSRDVNTVLENTPPTTPESTISNLSPRGEIGGLSPNNADNESCKSTEAENDYSTRGEQRRAAASKITNYSEEDSLNCEPHTSSSKKRDELLPSPCKKRRRSCKGDGDTVPVAAKRGRKPNRSRHNSDSDDTSEHSLHAIMTNFESRLTRSPRPQKYNFYVELDPNLDSAARIAVLLQKLQDLRKTYADVKAELVTIERRRKKIRRREREALKAAKQELACT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-