Basic Information

Insect: Drosophila yooni
Gene Symbol: -
Assembly: GCA_035043035.1
Location: JAWNNG010000652.1:1076170-1078837[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.2 2.1e+02 2.7 2.6 2 23 332 354 331 354 0.95

2 10 7.4 4.9e+02 1.5 1.2 2 23 373 395 372 396 0.80

3 10 0.0058 0.38 11.3 0.5 3 23 412 433 410 433 0.94

4 10 0.00015 0.0099 16.3 0.2 1 21 474 494 474 495 0.96

5 10 0.39 26 5.5 2.6 3 23 504 525 502 525 0.94

6 10 8.5e-06 0.00056 20.2 1.7 1 23 531 553 531 553 0.98

7 10 0.0044 0.29 11.7 0.5 1 23 558 581 558 581 0.96

8 10 0.12 7.9 7.1 0.6 2 23 589 611 588 611 0.95

9 10 1.1 70 4.2 0.5 2 23 618 639 617 639 0.94

10 10 0.0015 0.1 13.1 1.5 1 23 644 667 644 667 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.2	2.1e+02	2.7	2.6	2	23	332	354	331	354	0.95
2	10	7.4	4.9e+02	1.5	1.2	2	23	373	395	372	396	0.80
3	10	0.0058	0.38	11.3	0.5	3	23	412	433	410	433	0.94
4	10	0.00015	0.0099	16.3	0.2	1	21	474	494	474	495	0.96
5	10	0.39	26	5.5	2.6	3	23	504	525	502	525	0.94
6	10	8.5e-06	0.00056	20.2	1.7	1	23	531	553	531	553	0.98
7	10	0.0044	0.29	11.7	0.5	1	23	558	581	558	581	0.96
8	10	0.12	7.9	7.1	0.6	2	23	589	611	588	611	0.95
9	10	1.1	70	4.2	0.5	2	23	618	639	617	639	0.94
10	10	0.0015	0.1	13.1	1.5	1	23	644	667	644	667	0.97

Sequence Information

Coding Sequence: ATGGCCGCCGCAGCGGATGCTGCAAAATGGAACGCGTTGCTGGCGACGAACAAAGcgaacaatacaaaatgtcgCGCTTGCCTCGCCGTCGGTCGCCAGACGGTCAAACTGGATGCGAAAATACCGGAACTGAAGAAAGTGCGCACCTACGGTCAGGGATTGCGCCAGTGCACGAATATACCGTTAACCGCTCGCTCCGCCAGCGGCTACAGGTGGCCCATGCAGATCTGTTTACGCTGCTGTCGCGCCCTCGAGGTGGCCGTGCATTTTGTGGAACTGACACTGGAATCGAATCGGAAATTGTTTGCTGAATCGCAAAATGTCAAGCCGattacgacgacgacgatgaagGGTGCGTCGGGTGAGCTGAAGCGCAAGGCAAGTGGCAGCAGTGAGATGTTGAATTGGAATCAATTCAGTCAGGAGTTTGAACAATTTGTGGAGAGCTACGATGGGATCACAGCGCCCATTGAGGAGAATGTGCTGTATATGCGGGGTGCCAAAGTGCCACGCCTCGATGCGGACATAGCAACCAACCGGCAGCCACCCGAGGAGGATGATGTCATCTTATTTGACGTAAAGTATGAGAGCAATGATCAGGATCAGGAGGATGAGAACGATGGCTCCGATGCGAAGAACAGCGAAACCTTCTATGACACTAGTATTATAAATGAGAACAACCAATCCATCGCCGCTGGCATTAAAAACAGCgccgagaacaacaacaattataatttcgaTAACAAGAATGGAGATGTGGAGGGCGATCTCATCCAGCGTGCCCTCTTCATGACGCTCAACGATGatgtcaacaacagcagcagcagcagccaaacaacGTACGATTTACAATGCATTGAGTCCATCAAAGCcacattattaaaatCTTTGGAGGAAGAGCAGCTGGCAGGCACAAGTGGCAACGGCTTGAGGAGCAGTTTGACCAGCAAATCAACGCCCAGCAGGGAGATCAATGTCCAGATACCGCTGCTCAGCTGCAGCATGTGCAAACAGACGCACACGGAGGCCAAACAGATGAGGACACACTATATGCGTGCCCACAGCTGTGATGTGCCCGAGGATGATATCATTGGGCTGACAAAAAATCAAAGCTTTAAGTGTCGTCCATGCAATGATTATGTGACAAACAGTCGCTCGGATATGCAACAGCATCTAATTGAGCATCACAAAATCGATGGGGATTTTGAAATGTATTGTTATGTGCAGCAGAATTGTCCCGCCTGTGGGCGCATCTTCAAGGATCAGCGCTcagcacgcacacactacacacgcatgcacacaccacaacagcaacaacaacagcaacaacaacagcagcagcagcagcagcagcaaccacaacaacaacagcagttgcagccacaATCTGTCAATTCAGTCGAGCAGCAGCCTCAACAATTTGTGTGCACCGCCTGCGATAAGGTATTCAATTTAAAGGGCAGCCTGCAGGCTCATCAACGTTTCTGCCAGGTGAAGCAGCCGGTGCACTGCACCTTCTGCAAGGAGCAGTTTAGCAGCATACGCAAATACGAGTTGCacctgcaacagcagcacgcTGTGCACACGTTGCACGAATGCGAGATATGCCTGAAGAGTTTCAAGAATAGCGATTCGCTGGCTGTACATCGCAAGCGGCACTCGGAGCGACATTTTCACTGTGACAAGTGTTCGCTGAACTACATCAATGCCGCCGAGTTGCGGGTGCACTACGAGCGTGCCCATGTTCACGAGGAACAGGTGGTCACCTGTCGCAGCTGTGACAGCACATTTCAGAATTACGCACTGCTCCGCGAACACGAACAGCGGTCGCATCAAAAACTCAAGATTTGGCGCTGCGACAATTGCAGTTTTGAGGCGAACTCGCGTGCTCGACTGCGTCAGCATCAGTACGAGCACATGGATTATCCGTACAAGTGCCAGCACTGTCCCGAGGAGTTTGCTGATCGCGGCAAAATCCGTCAACATTCCAAAAAGGTGCACTCGGTGGAGCTGAGCGATGAGCAGCTGGCGGATATGTTTCGGGAACGCATCGGTTACACCAATCGCCATGATGCGTTCAGCAAGTCGAACAACTCATTGGAGATACCCGGTTTTAGTGATGATTGCTTTACGGAGCTGAAGAGTCTCGGCCTGGACTATGATGATATAACAACCGATCTCTTCTCGAATTCCACTAGCGCACTGGACACTCTGCTCGAATTGGTACCCTGA
Protein Sequence: MAAAADAAKWNALLATNKANNTKCRACLAVGRQTVKLDAKIPELKKVRTYGQGLRQCTNIPLTARSASGYRWPMQICLRCCRALEVAVHFVELTLESNRKLFAESQNVKPITTTTMKGASGELKRKASGSSEMLNWNQFSQEFEQFVESYDGITAPIEENVLYMRGAKVPRLDADIATNRQPPEEDDVILFDVKYESNDQDQEDENDGSDAKNSETFYDTSIINENNQSIAAGIKNSAENNNNYNFDNKNGDVEGDLIQRALFMTLNDDVNNSSSSSQTTYDLQCIESIKATLLKSLEEEQLAGTSGNGLRSSLTSKSTPSREINVQIPLLSCSMCKQTHTEAKQMRTHYMRAHSCDVPEDDIIGLTKNQSFKCRPCNDYVTNSRSDMQQHLIEHHKIDGDFEMYCYVQQNCPACGRIFKDQRSARTHYTRMHTPQQQQQQQQQQQQQQQQQPQQQQQLQPQSVNSVEQQPQQFVCTACDKVFNLKGSLQAHQRFCQVKQPVHCTFCKEQFSSIRKYELHLQQQHAVHTLHECEICLKSFKNSDSLAVHRKRHSERHFHCDKCSLNYINAAELRVHYERAHVHEEQVVTCRSCDSTFQNYALLREHEQRSHQKLKIWRCDNCSFEANSRARLRQHQYEHMDYPYKCQHCPEEFADRGKIRQHSKKVHSVELSDEQLADMFRERIGYTNRHDAFSKSNNSLEIPGFSDDCFTELKSLGLDYDDITTDLFSNSTSALDTLLELVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560615;
90% Identity: iTF_00525464;
80% Identity: -