Basic Information

Insect: Drosophila yooni
Gene Symbol: -
Assembly: GCA_035043035.1
Location: JAWNNG010000398.1:2294665-2296009[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.5 95 3.7 1.9 1 23 241 263 241 263 0.90

2 5 1.6e-05 0.0011 19.3 2.8 1 23 269 291 269 291 0.99

3 5 3.8e-05 0.0025 18.2 3.9 1 23 297 319 297 319 0.97

4 5 1.7e-06 0.00011 22.4 0.5 1 23 325 347 325 347 0.98

5 5 0.00036 0.024 15.1 4.0 1 21 353 373 353 377 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.5	95	3.7	1.9	1	23	241	263	241	263	0.90
2	5	1.6e-05	0.0011	19.3	2.8	1	23	269	291	269	291	0.99
3	5	3.8e-05	0.0025	18.2	3.9	1	23	297	319	297	319	0.97
4	5	1.7e-06	0.00011	22.4	0.5	1	23	325	347	325	347	0.98
5	5	0.00036	0.024	15.1	4.0	1	21	353	373	353	377	0.89

Sequence Information

Coding Sequence: ATGCTCAAAAACATGTGTAGAGTGTGCGGCAGATATGCAGCCTACAAGAACTCGTTGAAAATctttgaaaatcaaaacatgCTGTGGAGCATCCAAGTTCTCACGGGTCTAGTTTTGGAAAATGCGGAATGTTTGCCAAAactcatttgtatttgctgccAGACAGAGCTGCGCGAGGCAATCAGGTTCAGTGACAGAGTCATTGCAGTTCAGAAGAGGCTTCTGTCAGCGTTGACTGAGGAGGAACTTCTACAAATATCCGAGGAGTATAGAGAAGCCGTAAGGGACTCTTCGGGCAACTGTAGCAAAAATGTACCTAACACAAAGCACAACTCTGAGGCACAATCCGAATCCACAATAAATAAGCCTAGAACAGATGAAGAGCTAGTCCTTAGAGAGCCACACGAAGGGAACGAGATAATCATAGAAGAACAATGCAAACAGGACGATCTACTGGAGTATGACTTCATCATTGAGGAAGATATAATAAGCCAAGAGGCCGACCACCAGGAATCCCAGTCCCAGAACACACCTGAAGAACaccaatttgaaattgccaGCGAAGATTATGAAAAGTCTGCTGACGATGGTTATATCATGCCCAATAAGGAATCAGATGAAGAGTTTGAGGTGTTGGACAGAGTATTAAACGACGAGATTGCCACATCCCCGAGTATAGGCAAAAGGCTACCTGGGCGAAAACGCATCCCCAATTTGAGATACGTTTGTGATGAATGTGGCAATCACATATCTGGTCGCATGGCATTTGAGCTGCATTGCAGACGACATCGTGGCGATAAGCAATACGAATGCGACATCTGCCAGGATCGTTTCTGCACCGGCTCCGAGCTGAAGCGTCACATGCGGAAACACACCGGGGAACGCCCGTTTGCCTGCCAGTACTGCGGACGCTGTTTCACGGACTACAGCACCCGGGTGAAGCACGAGCGGACTCACACCAATGAGCGACCATATTCCTGCAAGAACTGTGGCAAAGCCTTCACCACTGCCTACATACTGAAGAACCACATGCTCATCCATTCCGGCGAGCGCGCCTTCAGCTGCGAATTGtgcaataaaacatttattagaCAAACGCATCTGGTTACGCATTGTCGGTCGAGCGCTCACAAGCGCAATCTGGAGCGACAAAACCAGTAG
Protein Sequence: MLKNMCRVCGRYAAYKNSLKIFENQNMLWSIQVLTGLVLENAECLPKLICICCQTELREAIRFSDRVIAVQKRLLSALTEEELLQISEEYREAVRDSSGNCSKNVPNTKHNSEAQSESTINKPRTDEELVLREPHEGNEIIIEEQCKQDDLLEYDFIIEEDIISQEADHQESQSQNTPEEHQFEIASEDYEKSADDGYIMPNKESDEEFEVLDRVLNDEIATSPSIGKRLPGRKRIPNLRYVCDECGNHISGRMAFELHCRRHRGDKQYECDICQDRFCTGSELKRHMRKHTGERPFACQYCGRCFTDYSTRVKHERTHTNERPYSCKNCGKAFTTAYILKNHMLIHSGERAFSCELCNKTFIRQTHLVTHCRSSAHKRNLERQNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00559045;
90% Identity: iTF_00564926;
80% Identity: -