Dyoo011705.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila yooni
Gene Symbol
Znf639
Assembly
GCA_035043035.1
Location
JAWNNG010000826.1:106417-109037[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.011 0.69 10.5 0.4 3 23 147 168 146 168 0.91
2 10 0.00011 0.0074 16.7 0.5 6 23 177 194 177 194 0.99
3 10 6.7e-06 0.00044 20.5 0.3 1 23 200 223 200 223 0.98
4 10 9.2e-05 0.006 16.9 0.5 1 23 235 257 235 257 0.98
5 10 0.00023 0.015 15.7 7.7 1 23 264 287 264 287 0.96
6 10 9.4e-06 0.00062 20.1 1.8 1 23 293 315 293 315 0.96
7 10 0.24 15 6.2 0.9 2 23 324 345 323 345 0.96
8 10 9e-05 0.0059 17.0 2.8 2 23 351 373 350 373 0.95
9 10 1.4e-07 9.3e-06 25.8 0.7 2 23 380 401 379 401 0.97
10 10 0.00014 0.0093 16.4 4.4 1 23 407 430 407 430 0.96

Sequence Information

Coding Sequence
atgctgatgatgatgacaacgacgacgatgtcgatgtcgatgaaACCCATAATGAATGAGAGCAGCGATAGCACGCCGCACACTTCCTCAGATGATGATGATGAAGTGCCTCTGGTCAAGCTGAAGCACAAGCTCAAACCAAAGCGGATGGGACGCGTTGTGGCACGTAATGAGCAGCGCCGGCTAACCCTCGCCCAGGAGTTGAATCAGCTGCTGGATGACACCGACACCGGATGCGAtaacgatggcgatggcgacgtCGACGGCGTCAATCGAGAGCGTCGCAAACAGcggaacacaaacacaaataacaatgCGCCAACGGATACACAGAAGAGCGAACTGCAGGCGGCCATGGAACGGAAGCCGAAGGGCTGCTCGCGGGCGCAGCTATCGAAGCGGTATGAGGAGGCCATCGCCAGCTATATGAATGCCGACTGTGATCTGTGCGACTTCAGCACCAAGTACCTGTCCCAGTTGAAGGTCCACTTCCTGGAGGTGCATCAGCGCGACGCGTATCTCAAGTGCTGCAACAAGGTCTTCAATCGCGCCTCCAAACTGATGGATCACATACGCAAGCACATCAATCCCAAGCTATTCACCTGTTCGATTTGCAACAAGTCGCTAAATTCCCAGGATTATCTGGCCACGCACATCGAGACGGTGCACAACAAGGTCGCCCAGATTGGTAAGGTGCTGAAGTATCCGTGCCCGAAATGCGAGCGCACCTTCAGCAGCGAGAGGCGTTTGGGTAATCATTTGCTGAAGCACGACACGGATCAGTTGGAGCACAGCTGCCACATATGCCACAAGAGTTTTGCAAATGTGCACCGACTACGTCGGCATATACAGTCGATCCATGAGGATGTGCATCCGCATGTCTGCGACATTTGTGGCAAGAAGTTCAAGTTTAAGCCATCGTTCGAGCGCCACTTGCTGGAACATCAGGGCGTCGTCGCACCAGCAATGGAGTGCTCCGTCTGCGGTGTTTGGCTGAAGAACGAGCACAGTCTGCGACTGCATCGATTTACGCACGATAGCACCGATACCGTCTGCCCCCATTGCTCTAAGACGTGCAGTTCGCGGACAGCGTTGCGCGCCCATGTTAAATATGCTCACAAGCTGACCACAAATCTGCAGTGCACTTACTGCGAGAAGAGCTTCAAGCAGCAGCGCAACCTTGAGGAGCACATGGCGATACACACCGGCCTCCAGCTATACAATTGCCCCCACTGTCCCAAGGAGTGCAGGTCGCGCTCCAACATGTATGTCCACATCAAGCAGAGACATGCGGACGAGTGGCTCAAGGCCAAAATGGCACGCTCCCACAATCCGCAGTTTAAGCCGCACGCCTAA
Protein Sequence
MLMMMTTTTMSMSMKPIMNESSDSTPHTSSDDDDEVPLVKLKHKLKPKRMGRVVARNEQRRLTLAQELNQLLDDTDTGCDNDGDGDVDGVNRERRKQRNTNTNNNAPTDTQKSELQAAMERKPKGCSRAQLSKRYEEAIASYMNADCDLCDFSTKYLSQLKVHFLEVHQRDAYLKCCNKVFNRASKLMDHIRKHINPKLFTCSICNKSLNSQDYLATHIETVHNKVAQIGKVLKYPCPKCERTFSSERRLGNHLLKHDTDQLEHSCHICHKSFANVHRLRRHIQSIHEDVHPHVCDICGKKFKFKPSFERHLLEHQGVVAPAMECSVCGVWLKNEHSLRLHRFTHDSTDTVCPHCSKTCSSRTALRAHVKYAHKLTTNLQCTYCEKSFKQQRNLEEHMAIHTGLQLYNCPHCPKECRSRSNMYVHIKQRHADEWLKAKMARSHNPQFKPHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00499728;
90% Identity
iTF_00499728;
80% Identity
-