Dwil014951.1
Basic Information
- Insect
- Drosophila willistoni
- Gene Symbol
- -
- Assembly
- GCA_018902025.1
- Location
- JAFEWB010000731.1:4802311-4804523[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0023 0.18 12.4 1.4 1 23 356 379 356 379 0.97 2 10 0.057 4.7 8.0 0.3 6 23 389 406 389 406 0.98 3 10 6.7e-05 0.0055 17.2 2.6 1 23 412 434 412 434 0.99 4 10 0.003 0.24 12.1 1.1 1 20 451 470 451 474 0.87 5 10 0.00099 0.081 13.6 1.0 1 23 482 505 482 505 0.95 6 10 0.0013 0.1 13.2 0.3 3 23 513 534 511 534 0.89 7 10 0.017 1.4 9.7 0.1 2 23 546 568 545 568 0.94 8 10 0.0076 0.62 10.8 4.9 1 23 575 598 575 598 0.93 9 10 8.9e-06 0.00073 20.0 0.4 1 23 604 626 604 626 0.98 10 10 0.13 11 6.8 2.3 1 23 632 655 632 655 0.94
Sequence Information
- Coding Sequence
- ATGACAGAGTGCGTGCTTTGCTTGAGCTACTGCTCAACGGAGACTGCCCTAGGACTTTCCTCAAATGAAGGATTGCAGTTGAGCGTTCATGAGACAATACGAAAATATTTCTTGTTCTTTGAGCTACCCGAAATTGATCAAATCTCATTGGAGGTCATATGCCAGGATTGCTGGCACAGTGTGCGCTCCTTCGATGAGTTCTACAATCGTGTCTTTGAATTGCATCAATATCGAAGCGGAGCCGTGGAGTTTTGTGGCGAAAGTGCAACAGTTAATCCCTTGTACGAACAGGATGTCTTGGCCGAGGAGGGAATCTTTGAGACGGACGAAATTAAAATGGAAGTTAATGAGCTGGAACCTCTGGCTAAGGTGGAGGAGGACGCAAAAGATCTGGTGGATTCTGAAAAAAAGGAGCAAAACGTTTCCGAACTCGTGTCGACGCCATCTGAGGCTGTTCCACTAAGGCGCAGCACACGACTAGGGTGTCCATCGAATGTGTCAAAAGAATCTTTACCCTGCCCTAAGAAAATGAATAACCTGCCCAAAGTCAAGTTGAATGTAGAGCTTGTAAATCCCATAGATGCAAAGAAAACGCTGCTGGATTCAGATGGCGATCGACCCTTGGCCGAACTTCTGATGAAGGAGATGCCTTCATCTGCGCCACGAAGGCGACGCGGACGTCCACCTAAGGTTCGAAAAGAAGAACCTTCTCCAAAGGTCGAAGAAACTACACCTCCATCGCCTCCCAGCGAGACTAAACACGAATTTGATTCAAATTACGACGATGACGAAATTAATTTTGCTGCTGCGGAAAATGAGCTTGGAACTGATGATTCTGACATCTCTTCCTCTGACTCTTTGCCGGACATAGAACCCGAAGAGCGTTATGCAGTAATTCCCAAACGCGTGGTAGTTAAACCCAAAAAATATCGCAAGCGCAAAAAACCCGTTGATCCGCCAGTCCGTCCCAGTAGTGCGGAAATCGAAAGACGAAGGGCGGAGATCGAAAGACGCAAAGCGGAACAGGATGGCTATGACGAGATTTTATTGTCATTTTTTGAGAAATTTCCATGTCACATTTGTAATCTTCTTGTTAAGAATTTTGCAGACATGCGACGTCATCAGCGCATGTCTCACAGCATTGAAGTGGGCTACATGACTTGCTGTGGACGCAAGTATTGTACACGAAAACTACTCGCCGAGCATGTGCTAGTCCATCAAAATCCAGATCATTTTAAGTGCCACCAATGTGAGCAAGTTTTCCCGGATTCCCGTACCATGGAACTACATAGAAGGACCCATGAAGCGGAAGCAAATGGCCTGGGGGCTGGCTCAAAGGAAAAACCAACTTATCAATGCGAAAAGTGTCCGACAAGTTTCAATACCAAGGCTGCCTTCGATTATCATAATGTGTCCAAGCATGTCCCCAAATCAGAGTACAAATTCCAATGTCTCGAATGTAACAAAAAATTCCCCGTACATCGTAGATTAAGAGAACATATGGGTATTGTCCATAATCCAGAAAACTCCGTAATATGTGATAAATGTGGTAAAACTTTAGGTTCGCCAAAGTATCTCAAGCGGCATAATGAGTATATGCATTCCGATGAGCCGGGGGAGAAGCCAAAACCAGTACAATGTGAAATCTGTGGGACATGGCTACGCAACAAACGTGGACTGAAAAGACACGTCGATTCGGTGCACGAGCCACCCAGTGAGAAACATATTTGCCAAATATGCAATCATCGTTCCACCAATTCCCGTTCCCTGAAACGTCACATATATTACAATCATATAGCTGAGAAGAAATTCAAGTGCGGCTTGTGCGAAAAGTCATTTATGCGACCGGGGGAGTTGAGGGAGCACACATCAACGCACACCGGCGAAGTGCTATACACCTGTCCGAATTGTCCCATGACATTCTTTTGTGCTGCCAACAGGCTCAAACATCGACAGCGTTTGCATCGCGCCGAATGGGAAGCCGATCGGATGCCAACTCGCAGGGGTCCAAGGAAGCGATAA
- Protein Sequence
- MTECVLCLSYCSTETALGLSSNEGLQLSVHETIRKYFLFFELPEIDQISLEVICQDCWHSVRSFDEFYNRVFELHQYRSGAVEFCGESATVNPLYEQDVLAEEGIFETDEIKMEVNELEPLAKVEEDAKDLVDSEKKEQNVSELVSTPSEAVPLRRSTRLGCPSNVSKESLPCPKKMNNLPKVKLNVELVNPIDAKKTLLDSDGDRPLAELLMKEMPSSAPRRRRGRPPKVRKEEPSPKVEETTPPSPPSETKHEFDSNYDDDEINFAAAENELGTDDSDISSSDSLPDIEPEERYAVIPKRVVVKPKKYRKRKKPVDPPVRPSSAEIERRRAEIERRKAEQDGYDEILLSFFEKFPCHICNLLVKNFADMRRHQRMSHSIEVGYMTCCGRKYCTRKLLAEHVLVHQNPDHFKCHQCEQVFPDSRTMELHRRTHEAEANGLGAGSKEKPTYQCEKCPTSFNTKAAFDYHNVSKHVPKSEYKFQCLECNKKFPVHRRLREHMGIVHNPENSVICDKCGKTLGSPKYLKRHNEYMHSDEPGEKPKPVQCEICGTWLRNKRGLKRHVDSVHEPPSEKHICQICNHRSTNSRSLKRHIYYNHIAEKKFKCGLCEKSFMRPGELREHTSTHTGEVLYTCPNCPMTFFCAANRLKHRQRLHRAEWEADRMPTRRGPRKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00571407;
- 90% Identity
- -
- 80% Identity
- -