Basic Information

Gene Symbol
ct
Assembly
GCA_018902025.1
Location
JAFEWB010000698.1:6422645-6437810[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.6e-27 4.5e-23 81.2 0.0 3 72 384 454 382 459 0.95
2 3 4.5e-32 4.4e-28 97.2 0.0 3 77 877 952 875 954 0.96
3 3 2.8e-31 2.7e-27 94.7 0.0 3 76 1136 1210 1134 1213 0.96

Sequence Information

Coding Sequence
ATGAAACTCCATTCACTAACCACAATATTCTCTCTCTTTCTTTCTCTCTATCCTTTGCAGATTAAAGCACTTTTGGATGAGTTGCAACGTTTGCGTGCCTTGGAACAAACTCATCTTGTACAAATCCAACGGCTCGAGGAACATTTGGAAGTGAAACGTCAGCATATTATGCGTTTGGAGGAACAGCACAGTCCACTGGATCTCAATGTGCTCAGTCCACAATCGGCAATTGCAGCAGCAGCCGCTGCCTGCGCCAATGATCCAAACAAATTCCAGGCTCTGCTTTTGGAACGCACCAAAGCACTGGCCGCCCTTAAGAATGGCGCTGTGGCTGTTGCAGCCGCTGTGGCATCTGATTCAGTGAATGCCACAAACGAAGATGCTGCCGGTAACCAACATCCCCATCATCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCGGTGGCCCATCATGTCGGTCATGTTGGACATGTCGGACATGTTGGCCATCACGGCCATTCCGCTCAGCTGTTGCATCAGGCTGCAGCTGTCGCCGCCGCTGCCCATCAATTCGATTCGAATTCATCCAGCTCCACCAGCACACCGAACAGCAGCACCGCCCAATTGGCCGCCAGCATAGCCAATATAGCCAATGGCAGCAAGTCCCTGCTGCAGGCAGCCGCCGCCGCTGCTGCCGCCGAGGATAACAACAATAGTCTAACACCAAATGCAAATGCAGCGGCTGCTGCTGCCGCAATGGCAGCGCAACATGCTGCAGCAGCGGCCTTGGGGGCCCCATCATTTTTGCCTTTCCAATTTGCCGCCGCCGCCGGACAGGATGGTCGGGGGCATTATCGGTTCGCCGACTCGGAATTGCAGTTGCCGCCAGGTGCATCGATGGCCGGCCGTTTGGGCGAATCCCTGATACCCAAGGGTGATCCCATGGAGGCCAAATTGCAGGAGATGCTACGCTATAATATGGACAAATATGCCAATCAGGCATTGGACACATTGCATATATCGCGGCGAGTGCGCGAATTGCTGTCGGTGCATAATATCGGTCAGCGTCTGTTTGCCAAATACATATTGGGCTTGTCGCAGGGCACCGTATCGGAATTGCTGAGCAAACCGAAACCCTGGGATAAGCTAACCGAAAAGGGCAGAGACAGTTATCGCAAAATGCATGCCTGGGCCTGTGATGACAATGCGGTTATGTTGCTTAAGTCGCTGATACCCAAGAAAGATTCTGGTCTCCCTCAATATGCTGGACGCGGAGCTGGCGGTTCGGGCGGTGATGATTCGATGACCGATGAACGTATCGTTCACATACTTAGCGAAGCCTCATCAATGTTCAAGAATAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCGTCACGATGACTTGACCCAAGACAAGGTGGCGCGTCTATATCAAGAGTTAATTGCACGAACTCCACGTGAGGCCGCATTTCCAGGCTTTCTGGTACCATCATTATTTGGCAGTGCTGCCAATATGCCCGGTGCAGCGAATGCCTTTCCGGGAGCCAATGCTTTCCCATCGGCCATGGCAGCCGATGAGAATATGCGACATGCTTTCGAGCGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCCAGCCTGATGGCTCTGCAGGTATTAAATGGCGCCCAGGACTTGTCATTGGCCGGCAAGGAGATCAAATTGAATGGACAACGCTCACTGGATCACAGCAGCAGCAGCAGCTCCAAAGACGGTGATCGTGATGAAAGCTTCCAGTCGATGCATGGTCGCAAATCTGAAGGTGGCTCAACCCCAGCCCCATTAGCTGCAGCACCAACATCGGGCAATTCATCTGGTGCTGGTGTCGGCCCCCAAGGACCAGGACCAGCAGGACCAGGTGGGGCAACCAGCGGCAATGCCAGCAACTCATCAGCCCCCAGTCCATTGAGCAATTCCATATTGCCACCCGCCCTGAGCAGTCAGAATGAGGAGTTTGCGGCCACGGCCAGTCCATTGCAGAGAATGGCATCGATAACGAACTCGTTGATCACCCAACCGCCGGTCACACCGCATCACAGTCAACCCCAACGACCCACCAAGGCGGTGCTGCCGCCCATAACCCAACAGCAATTCGATATGTTCAACAATCTCAATACCGAGGATATAGTGCGTCGCGTGAAGGAGGCTCTGTCCCAGTATAGCATCTCGCAGCGTCTGTTCGGTGAGTCCGTGTTGGGTCTGTCGCAGGGATCCGTTTCGGATCTGTTGGCCCGACCCAAGCCCTGGCACATGCTGACCCAGAAGGGTCGTGAGCCCTTCATACGCATGAAAATGTTCTTGGAGGACGAGAATGCTGTCCACAAGCTGGTGGCCAGCCAATACAAGATTGCCCCCGAGAAACTAATGCGCACCGGCAGCTACAGTGGCAGTCCTCAGATCACTCCCGGATTGGCCAGCAAAATGCAAGCAGCCGCCCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCGGCCCAGGCCCAGCATATAATGCAGCAAATGCAGGCGGCTGCCATGTCGGCGGCCATGCAGCAGCAACAGGCCGTTGCTGTGGCCCAGCAGCAGCAGCATCAGTCCCATCAGCAGCACCAGCAACATCAGCACCAGGTGGCCCAAGCTGCCCAGGCGGCGCTGCAGCAGCATCATCAGAATATGCTGCTCACCTCGCCTGGCTTGCCGCCGCAACATGCCATCAGTTTGCCCGCCAATCCCGGCCAGGTGAGTGCCGGCAGCACACCGAATTCCTCATCGACGGCCGAGGAGAAGAAACCGATGCTGATGCCCGTCCATGGTGGGGCCCATCCGCCCAATGCCATGCGTAGCCTGCATCAGCATATGTCGCCCACCGTATATGAGATGGCTGCTCTGACCCAAGATCTGGACACTCACGACATAACCACCAAGATCAAGGAGGCTCTGCTTGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCCGTTCTGGGCCTGTCCCAGGGCTCAGTATCAGAATTGCTAAGCAAACCGAAGCCCTGGCATATGCTTTCGATCAAGGGACGCGAACCCTTCATCCGCATGCAACTGTGGCTGAGCGATGCCAACAATGTGGAGCGACTGCAGCTGCTGAAGAACGAGCGACGCGAGGCCAGCAAACGGCGCCGTAGCACGGGACCCAATCAGCAGGACAATAGCAGCGATACCTCCAGCAATGACACCAATGACTTCTATACAAGCTCACCGGGACCCGGTTCGGTTGGTTCGTCGGTGGGCGGGGCTCCGCCCAGCAAGAAGCAGCGCGTTCTCTTCTCCGAGGAGCAGAAGGAGGCACTGCGATTGGCATTCGCCTTGGATCCGTATCCCAATGTTGGCACCATTGAATTCCTGGCCAATGAGCTTAACTTGGCCACCAGAACCATAACCAATTGGTTCCACAATCATCGCATGCGTCTCAAGCAGCAAGTGCCGCACGGCCAGCCGGGTCAGCAGGATAATCCGATACCGAGTCGTGAGAACACCAATGCCACACCCTTTGATCCCGTCCAGTTCCGCATCTTGCTGCAGCAGCGACTCGTCGAGTTGCACAAAGAGCGCATGGGCCTGGGCGGTGCGCCCATTCCGTATCCGCCGTATTTCGCTGCAGCCGCCCTTCTGGGACGCAGTTTGGCCGGCATTCCGGGAGCTGCTGCCGCTGCTGGTGTAGCAGCCGCAGCTGCTGCCGCTGTCGGCTCCGCCGGCGGCGATGAATTGCAGGCCCTGAATCAGGCATTCAAGGAGCAAATGAGCGGACTGGATCTCTCGATGCCCACACTGAAGCGAGAGCGCAGCGACGACTATCAAGATGACATGGAATTGATGGAGGCCGGAAGTCGTCATAATATGAGTGATAACGAATCTGTCGAAGGTGGCCCAAACGATCATGAGGGCGGCAACGATGGCAAATCCCTTGCCTCCGACTATGAGAAGGCCCTGGCCAAATCGGCCATGGTCTCGGCAGCGGCAGCCGCCTACATGAGCAATGTGGTACGCAGCTCCAGACGCAAGCCAGCCGCCCCGCAATGGGTCAACCCAGCCGGCACTACGCCCAACTCCACTCCAGTGGTCGGAGGAGCCAGCGACAACGAGAGGATCATCAATGGGGTTTGTGTAATGCAGCCATCCGACTACAATCGCAACGATGGTGAATCTGAGAGCAAATCGATCGAAGGATCCAATCAAGGTGAGGCAGAGCCCGAAATCGATCATCGTTTCATGGAGCCCGAAGTGCACATCAAGCAAGAGGACGACGAGGACGATGACCACCCACAGCAGCAGCCGCAGCAGCAGCAGATCCATTCAGAGGTGGCAGCAGCAGCATTGGCAGCCGCCGAGGCGGCCGAGCAGCAACTGAAGGTCATCAATGAGGAGAAACTGCGTATGGTCCGTGTCCGTCGATTGAGCAGCACCAGCAACAGTCGAGCCGATCAGTCCGAGGAGACTTGTACAACGGCTGCTGCCGCTGCCGCTGCCGCCTCCGCTGGTGGTGCCACGCCCACGCCAGCAGCCCCCGCCTGGAACTACTAA
Protein Sequence
MKLHSLTTIFSLFLSLYPLQIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEEQHSPLDLNVLSPQSAIAAAAAACANDPNKFQALLLERTKALAALKNGAVAVAAAVASDSVNATNEDAAGNQHPHHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSVAHHVGHVGHVGHVGHHGHSAQLLHQAAAVAAAAHQFDSNSSSSTSTPNSSTAQLAASIANIANGSKSLLQAAAAAAAAEDNNNSLTPNANAAAAAAAMAAQHAAAAALGAPSFLPFQFAAAAGQDGRGHYRFADSELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGSGGDDSMTDERIVHILSEASSMFKNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRHDDLTQDKVARLYQELIARTPREAAFPGFLVPSLFGSAANMPGAANAFPGANAFPSAMAADENMRHAFERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSSLMALQVLNGAQDLSLAGKEIKLNGQRSLDHSSSSSSKDGDRDESFQSMHGRKSEGGSTPAPLAAAPTSGNSSGAGVGPQGPGPAGPGGATSGNASNSSAPSPLSNSILPPALSSQNEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQITPGLASKMQAAALPMQKMMNELKLQEPAQAQHIMQQMQAAAMSAAMQQQQAVAVAQQQQHQSHQQHQQHQHQVAQAAQAALQQHHQNMLLTSPGLPPQHAISLPANPGQVSAGSTPNSSSTAEEKKPMLMPVHGGAHPPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELNLATRTITNWFHNHRMRLKQQVPHGQPGQQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLGGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGVAAAAAAAVGSAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDMELMEAGSRHNMSDNESVEGGPNDHEGGNDGKSLASDYEKALAKSAMVSAAAAAYMSNVVRSSRRKPAAPQWVNPAGTTPNSTPVVGGASDNERIINGVCVMQPSDYNRNDGESESKSIEGSNQGEAEPEIDHRFMEPEVHIKQEDDEDDDHPQQQPQQQQIHSEVAAAALAAAEAAEQQLKVINEEKLRMVRVRRLSSTSNSRADQSEETCTTAAAAAAAASAGGATPTPAAPAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00571036;
90% Identity
iTF_00618271;
80% Identity
iTF_00618271;