Basic Information

Gene Symbol
kn
Assembly
GCA_018902025.1
Location
JAFEWB010000715.1:7880973-7884685[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-133 3.2e-129 432.0 0.0 166 385 34 283 26 285 0.94
2 2 2.2e-07 0.0022 16.5 17.0 422 518 286 382 282 403 0.59

Sequence Information

Coding Sequence
ATGCGCCCAACCAGCAGGAGCAAAATATTATTTCAGCAAATAAAATCAGTGAGGCAAAGGGAAGCACCAGAAGCAGGAGCACGAGCAGGACCTGGAAGCAATTGCTGCCGGGAGCAGGAGCTGTGGAGTGACAATATCATGTCGCTGGTGCTGCTGCTCCTGGTGCCCCTGGCATTGTGCAATCAAAATTGCCTGAAAAATGCCGGCAATCCACGGGACATGCGAAGATTTCAGGTTGTCATTTCCACTCAAGTGGCTGTGGATGGGCCATTGCTGGCGATCTCGGATAACATGTTCGTTCACAACAATTCGAAGCATGGAAGACGTGCCAAGCGACTGGATACAACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCACCGTTGCCCGTGGCCACGCCCTGTATTAAGGCGATCTCACCCAGCGAGGGTTGGACAACGGGCGGAGCCACTGTCATAATAGTCGGGGACAATTTCTTTGATGGCCTTCAAGTGGTTTTTGGCACCATGCTGGTGTGGAGTGAGCTGATCACCTCGCATGCCATCCGAGTCCAGACCCCGCCAAGGCATATACCCGGTGTTGTGGAGGTGACGCTCTCCTATAAGAGCAAGCAGTTCTGCAAGGGATCGCCCGGACGCTTTGTCTATGTCTCAGCTCTCAATGAACCCACCATTGACTACGGTTTCCAGCGCCTGCAGAAGCTAATACCGCGCCATCCCGGCGATCCGGAGAAACTGCAAAAGGAGATTATCCTTAAGCGCGCCGCCGATCTGGTCGAAGCTCTCTATTCAATGCCCCGATCACCAGGAGGCTCCACCGGCTTTAATTCATATGCTGGTCAGCTGGCAGTTAGTGTCCAAGACGGATCCGGCCAATGGACCGAGGATGACTATCAGCGCGCCCAGTCGAGCAGTGTGAGTCCTCGAGGTGGCTACTGCAGCAGCGCCTCTACGCCGCACAGTTCGGGTGGCTCGTATGGCGCCTCGGCAGCCACTTCCGCGGTGTCGGCCTCAGCTAATGGTTATGCTCCCGCACCCAACATGGGCACACTGTCCTCCTCTCCGGGCAGTGTATTCAACTCCACGTCAATGTCCGTGTCGTCGACCTGGCATCAGGCGTTTGTGCAACATCATCAGGCAGCTGCCGTTGCTGCCACCCATCCGCATCACTATCCGCATCCGCACCAGCCATGGCACAATCCAGCCACGGCATCAGCTACTGCGACGGCCGTTTAA
Protein Sequence
MRPTSRSKILFQQIKSVRQREAPEAGARAGPGSNCCREQELWSDNIMSLVLLLLVPLALCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASAATSAVSASANGYAPAPNMGTLSSSPGSVFNSTSMSVSSTWHQAFVQHHQAAAVAATHPHHYPHPHQPWHNPATASATATAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00615327;
90% Identity
iTF_00521898;
80% Identity
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