Basic Information

Gene Symbol
-
Assembly
GCA_018902025.1
Location
JAFEWB010000714.1:1739685-1749998[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-07 0.00018 21.9 0.0 12 88 63 127 58 128 0.78
2 2 0.38 3.4e+02 1.9 0.0 68 86 166 185 151 186 0.70

Sequence Information

Coding Sequence
ATGTCATATTGTGGTGATATTGCTGCTGGTTCTGGTGATGCTGAGCGTGCCTTTGTTTTTGATAGTGAAGAAGATAGTGAGTCCGACTCCGAGTTTGACTTTCGCGCCCTGCCAGAGAAGCAGAAAGCTGCTTATCTGGCTCAAAAACGGCTAATTTGGCGATCACGGCCAAAAAAGAAGAAAGTCTTTATGGAAAGACTGGGTCCCATTAAGGACCCCAAGGACCTCTTGAAGAAGCAGCTAATTTGCCTCTTCACCATGTTTCAGTCCGTTCGGAAACAAGGAGGCATTCAACGCGTGACTTCTTGGCCTCTGGTGGCTGGGGTCTCGTATTCCAAGGAAATTCTGCAAAACATTTACTCCTCTGTTTTGATGGAATTCCAGTCAAAGGAATACGAGAGGATTGAGGAGTTAAAGACCCTGCGTATCCCTGATTGGTTCGACAACGGCCAATTCATCGGATACCAAAACATTAACATCCACATGCCCCGAAAGACGCAAAGCCCAGCCGTCGTTAAGAAGATTTTGGACAAAATATATGAAAAATATTTTGTTCCAAACCAAGAGTCTGGATCCCTATTCTGGGTAAAGGACTCTTGGGTGGCGGCCACCAAAATGGTAGCAGGGGCCATAACTGATGCTATGGATGAAATCGACGCCAAACTGAAGACCTGGCCCAGAGAAGGAGGAGGCGTCTTCAAAGGTCCCGCCTTTACGTTTTTTGCCGGAAAAGGGAAGTATTTTGGAGTACAACAATGCAATTTGTGGTCCTAA
Protein Sequence
MSYCGDIAAGSGDAERAFVFDSEEDSESDSEFDFRALPEKQKAAYLAQKRLIWRSRPKKKKVFMERLGPIKDPKDLLKKQLICLFTMFQSVRKQGGIQRVTSWPLVAGVSYSKEILQNIYSSVLMEFQSKEYERIEELKTLRIPDWFDNGQFIGYQNINIHMPRKTQSPAVVKKILDKIYEKYFVPNQESGSLFWVKDSWVAATKMVAGAITDAMDEIDAKLKTWPREGGGVFKGPAFTFFAGKGKYFGVQQCNLWS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-