Basic Information

Gene Symbol
-
Assembly
GCA_018902025.1
Location
JAFEWB010000697.1:6383991-6385041[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.6e-09 5.9e-06 26.7 0.0 5 87 131 201 128 203 0.76

Sequence Information

Coding Sequence
ATGTTTTCGTGCAGTGAATGCAATTTCAAAAGTCCACGTCGCTCAAACGTGCGGCGGCACCATCAGAGACAACATGGCGAAAAGAAAAGAGGCACAAAATTCAAGAGAACCATGGAATTAGGACATCAGGCAGTGGAGGAACAGACAATAGGGGCAGTGGAGGAGACAGTGGAGGATCAGACAATAGGGGCAGTGGAGGAGGCAGTGGAGGAGCAGACAATAGGGACAGTGGAGGAGACAGTGGAGGATCAGACAATAGGGACAGAGTTAACTCCCAGTGACCCAGTGACGCCAGCAAAACAAAATTCCAATTATGGAATTGAGGATGAGGAGGCCCTGAGCCCAAAAAAAATTAACGCACAATGTCATTCGGAAATTAAATGGAAATCCTTTAATTTTCAACTTAAAGCATTCAACACCAGGCTGGCCAAACTGACGAATGGCCAATTAAACGATGATGATGATGTCTTATTGTTTACGTTACACCAAGTTGTAGAGGACCGGGGAGGATTCCACAGGATTAAAAACTGGGATAAGGTGGCAGCAATTTTGGGCTCAACGCCACAAACTGTAAAAGATCTTTATCAAAGTAGACTGCTCCAATTAGAAATGACGGAAAGAAGTCGAAAAAGCGAAATAAGGGCTCTAGATATTCCATTCTGGTGGGATGACGGAGACCCAGTATCATATACTAACAGACATACATTGCTAAACCCTAATGTGGTGTCTAATAGGACTATAGTATATGTCCTGCGAAAAATATTCAACGACTATTATCTACCAAGCCAAGTCACGAATGCGCCTTTCGAAGTAAAAGACACCTGGATGTACGTCACCAAAATGAGTGGTAGGCTTATTATAATAAACATGCAAAACATGTATATTGAAGGTGCAGAGTCTGACATACGATTTTAA
Protein Sequence
MFSCSECNFKSPRRSNVRRHHQRQHGEKKRGTKFKRTMELGHQAVEEQTIGAVEETVEDQTIGAVEEAVEEQTIGTVEETVEDQTIGTELTPSDPVTPAKQNSNYGIEDEEALSPKKINAQCHSEIKWKSFNFQLKAFNTRLAKLTNGQLNDDDDVLLFTLHQVVEDRGGFHRIKNWDKVAAILGSTPQTVKDLYQSRLLQLEMTERSRKSEIRALDIPFWWDDGDPVSYTNRHTLLNPNVVSNRTIVYVLRKIFNDYYLPSQVTNAPFEVKDTWMYVTKMSGRLIIINMQNMYIEGAESDIRF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-