Basic Information

Gene Symbol
-
Assembly
GCA_018902025.1
Location
JAFEWB010000032.1:936110-937136[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8e-09 7.1e-06 26.5 0.1 5 87 147 216 143 218 0.77
2 2 4 3.6e+03 -1.4 0.0 72 86 261 275 248 299 0.73

Sequence Information

Coding Sequence
ATGTTTTCGTGCAGTGAATGCAGTTTCAAAAGTCCACGTCGCTTAAACGTGCATCAGAGAGAACATGGCGAAAAGAAAAGTGAAGAAACCATCTACCAGTGTAACTGCTGCAGCTACACCACAAATCTGCCATACAACCTTAGGAGGCAGAAAATTCAGGAGAACCATGGGCCGGCATTGAAGCAGCAGAAAATAGTACATCAGGAATTAGGACATCAGGCAGTGGAGGATCAGACAATAGGGGCAGTGGAGGAGGCAGTGGAGGATCAGACAATAGGGGCAGTGGAAGTGGAGGATCAGACAGAGTTAACTCCCAGTGACCCAGTGACGCCAGCAAAACAACATTCCAATTATGAAATTGTGGACTTTGAGGATGAGGAGGCCCTGACCCCAAAAAAAATGTACGCTGTATGTCACTCGGAAATGAAATGGAAAACCTTTAATTTTCAACTTAAAGTATTCAACACCAGGCTGGCCAAACTGACGAATGGCCAATTAAACGATGATGATGTCTTATTGTTTACGTTACACCAAGTTGTAGAGGACCGGGGAGGATTCCACAGGATTAAAAACTGGGATACGGTGGCAGCTATTTTGGGCTCAACGCCACAAACTGTAAAAGATCTTTATCAAAGTAGACTGCTCCAATTAGAAATGACGGAAAAAAGTCGAAAAAGCGAACTAAGGGCTCTAGATATTCCATTCTGGTGGGATGACGGAGACCCAGTATCATTTACTAACAGACATACATTTCTAAACCCCAATGTGGTGTCTAATAGAACTGTAGAAAATGTCCTGCGGAAAATATTCAACGACTATTATCTACCAAGCCAAGTCACGGATGCCCCTTTCGAAGTAAAAGATACCTGGATGTACGTCACCAAAATGTGTGGTGGGCTTATTTTAATAAACATGGAAAAGATGTATATTGAAGGTGCAGAGTCTGACATATGA
Protein Sequence
MFSCSECSFKSPRRLNVHQREHGEKKSEETIYQCNCCSYTTNLPYNLRRQKIQENHGPALKQQKIVHQELGHQAVEDQTIGAVEEAVEDQTIGAVEVEDQTELTPSDPVTPAKQHSNYEIVDFEDEEALTPKKMYAVCHSEMKWKTFNFQLKVFNTRLAKLTNGQLNDDDVLLFTLHQVVEDRGGFHRIKNWDTVAAILGSTPQTVKDLYQSRLLQLEMTEKSRKSELRALDIPFWWDDGDPVSFTNRHTFLNPNVVSNRTVENVLRKIFNDYYLPSQVTDAPFEVKDTWMYVTKMCGGLILINMEKMYIEGAESDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-