Basic Information

Gene Symbol
-
Assembly
GCA_018902025.1
Location
JAFEWB010000714.1:1729106-1730102[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-09 1.3e-06 28.8 0.0 24 88 108 163 78 164 0.82
2 2 1.9 1.7e+03 -0.4 0.0 64 86 198 221 190 222 0.69

Sequence Information

Coding Sequence
ATGCCTTTGAGTCAATTTTGCGATTACGAGTCCCCCCAGCACATCGGGGAAAAAACCTCGAGACCACCATTGTCATTGTCGGGGATCGAATGGTTTGAGGAGGAGGAAGAGCCACAACAACCACCGTCGCCTCAACCTCCACCTCTTTTTGAGGACAGCGACAGCGAGTCCGACTCAGAGTCCGAATCTGAGTTTAACTTTCGCGCCCTGCCAGAAAAGCAGCAAGGTGCTTATCTGGCTCAAAAAGGGCTAATTTGGCGATCACGGCCAAAAAAGAAGAAAGTCTTTTTGGAAAGACTGGTTCCTGTCAACGACCCCGAGGAGCTTTTGAAGAAGCACCCAATTTGCCTCGTCACGTTGCTTCAGTCTGTTTGTAGACAAGGAGGCTTCAGAAACGTGACTTCTTGGCCTCTGGTGGCTATGATGGCTGGGGTCTCGTGTTCCACGGAAATCCTGCAAAACATTTACTCCACCGTTTTGCTGGAATTCCAGACAAAGGAATACGAGCGGATTGACGAAATAAAGTCCCTGGGTATCCCGGATTGGTTCGACAACGGCCAATTCATCGGATACCAAAACTTTAACGTCCACTTCCCCCGAAAGACGCAAAGCCCAGCCGTCGTTAAGAAGATTTTGGACAAAATATATGAAAATATATTTGTTCCAAGCCAAGAGTCTGGATCCCTATTCTGGGTGAAGGACTCTTGGGTGGCGGCCACCAAAATGGCAGCAGGGGCCATAACTGATGCTATGGATGAAATCGCCAAACAGACGCCAAATTGA
Protein Sequence
MPLSQFCDYESPQHIGEKTSRPPLSLSGIEWFEEEEEPQQPPSPQPPPLFEDSDSESDSESESEFNFRALPEKQQGAYLAQKGLIWRSRPKKKKVFLERLVPVNDPEELLKKHPICLVTLLQSVCRQGGFRNVTSWPLVAMMAGVSCSTEILQNIYSTVLLEFQTKEYERIDEIKSLGIPDWFDNGQFIGYQNFNVHFPRKTQSPAVVKKILDKIYENIFVPSQESGSLFWVKDSWVAATKMAAGAITDAMDEIAKQTPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-