Basic Information

Gene Symbol
-
Assembly
GCA_018902025.1
Location
JAFEWB010000714.1:1662999-1671665[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6e-10 5.4e-07 30.0 0.0 24 88 103 158 80 159 0.82
2 2 0.63 5.7e+02 1.1 0.0 64 86 193 216 186 217 0.72

Sequence Information

Coding Sequence
ATGATTTTTGAGGCAAGCCCCAGCACATCGGGGAAGAAATCTCGAGAGGAGCCGACGGACCCACAACCACCATTGTCATTGTCGGGGATCGAATGGTTTGAGGAGGAGGAAGAGCCACAACAACCGCCGCCGCCTCAACCTCCACCTCTTTTTGAGGACAGCGAGTCCGACTCTGAGTTTAACTTTCGCGCCCTGCCAGAAAAGCAGCAAGGTGCTTATCTGGCTCAAAAAGGGCTAATTTGGCGATCACGGCCAAATAAGAAGAGAGTCTTTTTGGAAAGACTGGGTCCTGTCAACGACCCCGAGGAGCTTTTGAAGAAGCACCCAATTTGCCTCTTCACGTTGCTTCAGTCTGTTTGTAGACAAGGAGGCTTTAGAAACGTGACTTCTTGGCCTCTGGTGGCTATGATGGCAGGGGTCTCGTGTTCCACGGAAATCCTGCAAAACATTTACTCCACTGTTTTGCTGGAATTCCAGACAAAGGAATACGAGCGGATTGACGAATTAAAGTCCCTGGGTATCCCGGATTGGTTCGACAACGGCCAATTCATCGGATACCGAAACTTCAACGTCCACTTCCCCCGAAAGACGCAAAGCCCAGCCGTCGTTAAGAAGATTTTGGACAAAATATACCAAAAATATTTTGTTCCAAGCCAAGAGTCTGGATCCCTATTCTGGGTGAAGGACTCTTGGGTGGCGGCCACCAAAATGGCAGCAGGGGCCATAACTGATGCTATGGATGAAATCGGGCTCTCCGACTCTCTGTCTCTCTCTGTCCCTCATGCTGCTCTGAGGCCAGACTCGGCAGCGACATGCTCTGCCAGCATTCTGCCTACGTTTGGCGGCTTCCTTAGCCAATCGGAGCTTCGGGAAATGCTTGTGCCGTTACCGAAACTCTCGTTGCGACAGCGCATGGGCAGCGGAGCTCTGCTGCCAGTTTCAAAGTAA
Protein Sequence
MIFEASPSTSGKKSREEPTDPQPPLSLSGIEWFEEEEEPQQPPPPQPPPLFEDSESDSEFNFRALPEKQQGAYLAQKGLIWRSRPNKKRVFLERLGPVNDPEELLKKHPICLFTLLQSVCRQGGFRNVTSWPLVAMMAGVSCSTEILQNIYSTVLLEFQTKEYERIDELKSLGIPDWFDNGQFIGYRNFNVHFPRKTQSPAVVKKILDKIYQKYFVPSQESGSLFWVKDSWVAATKMAAGAITDAMDEIGLSDSLSLSVPHAALRPDSAATCSASILPTFGGFLSQSELREMLVPLPKLSLRQRMGSGALLPVSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-