Basic Information

Gene Symbol
-
Assembly
GCA_018902025.1
Location
CM032166.1:31907501-31908157[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.48 4.3e+02 1.5 0.0 73 88 9 24 2 25 0.81
2 2 1.6e-11 1.4e-08 35.1 0.0 17 89 124 187 112 187 0.82

Sequence Information

Coding Sequence
ATGTTTAAATGCAACACTTGTGGATTTCAAACAAATATCCAAAAATGTTTCAAACGCCACTTGTTGACGTACACCAGGGTATATGAAGGGCCCTATAAATGCACCTTCAACAACTGCAACTTCAGGACATTCACGAAGCGTTATTTGCCTGAACATATCGCAAGGAAGCACACGGCAGGTACACCAGGGAAGCCCGCCGCCCCAGTGCCGATATCAGAAGACTTGGATGATTCTGAAGACTCTATACCTACCATCGAGTCGGAGATTCAAACGCAAGAACAACCACTGACCATCGAGTCGGGACCAGAGTCAGCTGAAGAATTGGAGCTCCAATGTGGGCTCAAATGGAAAAGCTTGGCTGGCCAACAGAAATATTTTTACAAATCCATACCGCCAGTCGACGGAGACACTGGTGTGGATATGTTCAGTCTCTATATTTCCGTAGAGCTTCGGGGTGGGTTTGACAACTCACCCAATTGGGATAACGTGGCTCGCAATTGTGGCGCAATGGCACACTCCAATCTGTCAGGAGTGTACGAAAAGTACCTCCTGAAATATGAGGATCAGGAAAGGATCCGACTGCGAGACCTTAAATTATTATGA
Protein Sequence
MFKCNTCGFQTNIQKCFKRHLLTYTRVYEGPYKCTFNNCNFRTFTKRYLPEHIARKHTAGTPGKPAAPVPISEDLDDSEDSIPTIESEIQTQEQPLTIESGPESAEELELQCGLKWKSLAGQQKYFYKSIPPVDGDTGVDMFSLYISVELRGGFDNSPNWDNVARNCGAMAHSNLSGVYEKYLLKYEDQERIRLRDLKLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-