Dvul023603.1
Basic Information
- Insect
- Drosophila vulcana
- Gene Symbol
- Gata6
- Assembly
- GCA_008042555.1
- Location
- VNJP01007807.1:14170-18652[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 3.6e+03 -1.8 2.0 1 6 314 319 314 335 0.78 2 2 2.3e-17 7.9e-14 51.6 6.9 1 34 366 398 366 400 0.97
Sequence Information
- Coding Sequence
- ATGACCTCTCAGACTcagtttctgtttcagttccagcagcagcagcagcagctgattATCCAGGCGGGCGTCAGTGAGCCGGAGGAGCAGTACGTGGTGGTGCCGCGCATCCAGAGGCGCATCCTTACCACAGCGGGCACACTTGAATTGAACGAGGCGCGGGAAGGAGAGCCAAGTACCAACGCTAGCAACGCCAGCTCGGGATCCGCCCCCGACAGCCACATCGAGTTCCAGCGCAGTTCCCACCACTCGCCCGGGGCCACCCACTACGTTCAGATGGCGCCCCGCAACGCCGAGGTGCCGGAGCAGGTGACCACTGCAGCCGGAGCGCCTGCAGGTACCCTGTACGCTTACTCCACCGGTCCGATCATCTGCAGCGGAGACGACGTGACGGCCATCAAGATCGAGACGATTGAGAAGGGAGAGGATGGACGCTTTGGCACCGCCGGACCGGAGACCTCCACCTCGAGTTTGTACTACGAAGCGCCTGTGGTCGAGGGCAGCGTCCATGCCAACGAGTCCAAGACGTACGCAGACCTGGGCAACGCCTACGCCCCCTTCccgcccagctccagcttcagcagcaacagctacGCGGCCGCCCTGCAGCAGACCAACACTATCTATACGGTGCCAGGAACCGGACAGTTCCTGACCAAGTCCGAGTCCGGACTCAACTCGCTGCGCCAGGCGGGACCGACCACCTTCCAGACGATCTCCTTTCCCGACGGCGGCAACGCCATCGAGACCCTGTGGACGTCGCCAGCCCCGCCGGAGTACCAGAACGTGTCCTTCGGCAACTTCCACCCACAGGTGATCGACGAGTACGCGTCCGGCAACATGCCCACCACCCACTGGTCACCTGCCGGCGGCATCGGACAGTACGATGCCAGCTTAGTGACCGCCTCGGCAACGTCGTCGCCGAACCACGAGCTCAAGTGCGAGAACTGCCACTCGCCGTACATGCGCAAGGGCACATCCGAGTACTTCTGCCCCAACTGCCCGCCCTTCATGCGGATGCCGCCGCGGATGCCGCAACGGCAGGCGAAGCCCAAGGCCGCCGGCGCCCCCAACAACCGGCGCAATGGGGTCACCTGCGCCAACTGTCAGACCAACTCGACGACGCTCTGGCGTCGCAACAACGAGGGCAATCCCGTGTGCAATGCCTGCGGACTGTACTTCAAGCTGCACAACATGAACCGGCCGCTCTCGATGAAGAAGGAGGGCATCCAGAAGCGGAAGCGCAAGCCGAAGAACAACGGAGGAGCGCCCATGCACCGGGCCCCGCTGCCAAGCATGGCTCAGGGTGTTAATCTGATGGCCAACAGTCCGCTCTATCCGTCCCAGGTGCCGGTGAGCATGCTAGGCGGTGGCCAGCAGAATGCCAGCCCGGAGCTGCACGACATGTCAGCGACGGGTCCGGCGGGTGGACCCCGTGTGGTGGCCATTCCTCTGAACTCGGCTGCACCGCCCACCTCGGAGGGATCCCTGAACATGTCCGCTCGCCACCACGTGACCGGTGAGAGCCACTCGCCGTACAGCCAGCAGTCGACGCCGCAGAGCCAGTCGCCGCATCTGCCCAGCACGGTGACCATAAATCGCCAGATAGTCCAGCCAGTAACCAGCATCGAGAGCGGGCGCAGTTCCAACAGCGAGCTGACCCCCAGCGTGATCACGCGCACTGGACTGCCGGAGCGATCTTCGAATAACTAA
- Protein Sequence
- MTSQTQFLFQFQQQQQQLIIQAGVSEPEEQYVVVPRIQRRILTTAGTLELNEAREGEPSTNASNASSGSAPDSHIEFQRSSHHSPGATHYVQMAPRNAEVPEQVTTAAGAPAGTLYAYSTGPIICSGDDVTAIKIETIEKGEDGRFGTAGPETSTSSLYYEAPVVEGSVHANESKTYADLGNAYAPFPPSSSFSSNSYAAALQQTNTIYTVPGTGQFLTKSESGLNSLRQAGPTTFQTISFPDGGNAIETLWTSPAPPEYQNVSFGNFHPQVIDEYASGNMPTTHWSPAGGIGQYDASLVTASATSSPNHELKCENCHSPYMRKGTSEYFCPNCPPFMRMPPRMPQRQAKPKAAGAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMAQGVNLMANSPLYPSQVPVSMLGGGQQNASPELHDMSATGPAGGPRVVAIPLNSAAPPTSEGSLNMSARHHVTGESHSPYSQQSTPQSQSPHLPSTVTINRQIVQPVTSIESGRSSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00541443;
- 90% Identity
- iTF_00492624;
- 80% Identity
- -