Basic Information

Insect: Drosophila vulcana
Gene Symbol: -
Assembly: GCA_008042555.1
Location: VNJP01002365.1:23143-30446[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0092 1.2 10.3 1.8 1 23 1007 1029 1007 1030 0.95

2 8 0.0056 0.76 10.9 0.2 1 23 1035 1058 1035 1058 0.98

3 8 0.003 0.4 11.8 3.6 1 23 1298 1321 1298 1321 0.95

4 8 0.00033 0.045 14.8 2.1 1 23 1329 1351 1329 1351 0.98

5 8 1.2e-05 0.0016 19.4 0.7 1 23 1358 1381 1358 1381 0.97

6 8 4e-05 0.0054 17.7 1.4 1 23 1387 1409 1387 1409 0.96

7 8 5.8e-07 7.9e-05 23.5 1.7 1 23 1414 1436 1414 1436 0.99

8 8 0.089 12 7.2 3.3 1 23 1441 1463 1441 1463 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0092	1.2	10.3	1.8	1	23	1007	1029	1007	1030	0.95
2	8	0.0056	0.76	10.9	0.2	1	23	1035	1058	1035	1058	0.98
3	8	0.003	0.4	11.8	3.6	1	23	1298	1321	1298	1321	0.95
4	8	0.00033	0.045	14.8	2.1	1	23	1329	1351	1329	1351	0.98
5	8	1.2e-05	0.0016	19.4	0.7	1	23	1358	1381	1358	1381	0.97
6	8	4e-05	0.0054	17.7	1.4	1	23	1387	1409	1387	1409	0.96
7	8	5.8e-07	7.9e-05	23.5	1.7	1	23	1414	1436	1414	1436	0.99
8	8	0.089	12	7.2	3.3	1	23	1441	1463	1441	1463	0.98

Sequence Information

Coding Sequence: ATGGCTCAATTTCTAATGGTGGCCAAGTTTAGGCGGAAATGCGTACGAATGCAACAGCGTCTGCAGGACTTTGCCCAGGATTTATCCGATCGCCAGACGGCCAGGCAGGCCAAGCGTCAACAAAAGCAAGCACTGAAGCAGCAGGTGCCCAAAAACGAGGAGCAGAAGCCAACGCACCAACCGGAACGAAAACGCCGTATGGTGTCTGAATCAGACAGAGAAGcaattgccgccgccgccgccgctgagGACACACCTACAGAGGTTCGCAGAGTATTACAGGATCTGCCGCCACCCAAGGCTCGCCGCCTGCAGCTTCGCAAATATCGCGCCCTTTCCATCGGCTCTCAAATGGATCATCCCACTAATGCCATCGATGCCAGCAGCATACCTTGGAAGACGAAGGCCGCCCGCAAGCAGATCTCCGAGACATGGACTTGGTCCAGTCCATCCACCGAATCGCCAAATCCTAGCCCCGATCAGGATTTAAAGAGATGCAGTAGCACTGAACGGATGAGCGATCTGTCCGTGGGTCCCTGTTGTGGCTTTGAGAGCGACAGTAGTCCCTCCTCCACATCCACACAAGCCACGGTCGCTGATAGATTGCGGTTTCCGAAGCGTTTGGCGAGCATACCCAGGCGCGGTCAGCGCGTGAGAAATTCCCCAGTCTATAATCCAACCAAAAGGCAGAAGCGATCGTTGATCAAGAAGggacaggaggaggaggaggcactgCTGCAGATCGAAGCAGTGGCTGAAGAGAATACAAAGTCTGATCAAATGGAAGTAGTATTCCAGGCAGAATCGAAGGAAGAAAATTGTGCCGCTATCGACAGCACTTCTGATATACCAAAGGAGCAGCTTTCACTGGAGAACAAAGAAGTCAATTCAAATCATATTGGGGATGAGGACGCCTCGGAGAAGGAGTCGATGGACATGTCAAATAGTTTGACGGACAGTTGTAACCAAGAAGGCTCATTGATGGAGGAGGAAGCAGTCAACCCAAAGGAAGTCTCAAAGGAACTAGAGCAATACGCTTCCTCCGATAAGAGCAAAGAAGGGTCAGCGGAAGCAGAAGAAGTCAGCAATTATATGTGCGAAGAGGAGGCCGTCAACCAAAAAGACACAGAAATAGTTAACGAAACGAAAGAATCACCCTCAAAGGGTTCACAGGAAAGAATGGATGTAACCAGTGACGAAGGCAAGGATACCATTTCAACGGAGGACATATTAAACAAACACCTTTCAAGTGGTTTGCAGTCCCCAGATGATCCCCTGCAATCGGAGGAGCTGACCTCGTCCACGGAGTGTAGTGAGGACCAAACGGAATCCGTTGACAAGCCGGAGATCATTGTGAGTATACCTCTGGAGGTGCTCGATGAGAATCTGCAGCGTCGCCTGGTCGTGGAACAGGATACCACCGAGGTCAAGTCAACGCTCAAGGACCACCAGTCCGTCCAGCCCGACGATGTGAATAACAATGCTAACGATGAAAATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATTCTACTGTGGCACTCCGAATCAATGAAATTGAAGCAAAATCAGGAAATTGGGGTGGTGGTGCCATGTATCAAAAtgcggaagaagaagaaagtcCAAGTGCGGAAGAATCCCCACCAGATGAATCAGAaacagatgatgatgatgatgagataCCGGTGGCGCGGTCTGGACCCACACCCATGGATTTTATGGCCGAGTTCGCCAAGCACTGTGAGAACGGTATCGAGCAGCTAAAGGCGACCACGCCAGCCCCATCGCCCACGCCTTcggagctgccgctgcccctTAACGATCTGGAGGccaagcagcagctggaggtgGAGATGAACGATGTGGAGACGACACTGAATGGCATCCTTAACGAGATGCAGGACCAGCATATGTACACACCGAACTGTGCCCACATCGATGAGTTTCTTACGCCCGCCGATTATGCTCCGCTGACTGAACAGGAGCCCTCGGTTGCGTCGCCTCCCAATCCCTTCGAGGAGAGTCCAGTGGTGGTGGTAACGGAATCAGAAACAAAGCAACCCGCTGCCAACGAGGATCTATTTGATAACAGCAACTTTAGCAACGAACTTATAGGCTTCCAGAACGATATTCCCTGCTTTGAGAATATCGAGTCCTCTCCGGAACCGGGACAGCAGAGCTTGCATTTGGAGTTGACGCAACTCCTGAGTGATCTTCAACCATCGCAGGGGGAAAGTCCTAGCGTGGAGACACCGGTGGAAGTACAAACTGATGCACAAGTTGAGGTTCAAGTCCAGTCGCCAAATGCGTCAGAAACCACCCTGTCTTTAAGAGATCCTACCGAACAGCTTGAGATACAAATTCAACCCGAAACCCAGTCTCAAATGCAGCACGAAATCCTGACAGTGCAATCTCCGGAGGAGCATCCACAGAGCCAATCGCATATGGAACATCAGATCGTGGCGGTTGAAAATCAGATTCAATTACACAATTCATCTCAGTCATTGAACACGCACCAAATGCTGCAGGCGCAGACACGCATCCAAAACCAAGTGCAGCAGCCAACCGTACAGATGATGCAGCAGATCCAGCCTCAAGGTTACTcccagcagctgcaactgcaatcCTCCCAGGTGATGCCACATGTCCAGTCGCAGGACACAACGACGACAGTCACCTACGAGCAAATTTATCAGCAGCACATCGTGCAACAAACGGTCCAGAAATCCTCCAATAAGGTGCAGCTCATCTCGCTGCCCTCGTGTGCAGGGGAAACTAGGCAATGGCAGccgcaacaccagcagcaccagcagcaagtGCAGTGGTCATCGAGCCATCCGGTAATAGGAATGCCTGGAGCAACGTCAATTTCAACCAAAGTTCATCCCATACCCGCCACAACGCCGACTGGTCGGCCGTTAACCCTCAAGTGCCGCTTCTGCCAGAACGGACCGAGGTTTTCCAATAGCCTGGAGTATAGCCGTCACATCATTGAACTGCATCCCGCCGTAGCTCCATTCAACTGTCCGCACTGCCCGCTGGCGTTTGCCGGCAGGAGTAAGCGGTCGCAGCATATCCTTAGCCACCACGTGGTGCAGCAGTATCAGTGCGGCCAGTGCTCGCAGGTGTTTCCCGCTCAAAAGGCCCTGGACCTGCACATTCAACGCTTCCACATGCCCTCAAAGACCGCCGTTGACGGCGTCCGTGTGGAGGATGTTCAGCTGCAGATCACAAACGgcgggcggcagcagcagcagcagcggcgaccGCAATTGCCATATCAACCAAGACCATATCAACCCCGACAGCAACGTCAACCACAACGAACCCCGCATTATCGTGCGCCACtagagcagcagccgcagcagcagcagaagctgccAGTGATGCAGCCATCGCAGCCATCGTCGCAGTCGCCGCATCCGTCAACAATGGAAGTCCAGGCGAGCACAACAACGCCGCGAAAGATTCTGTGCTGTCCCGACTGCGAGGATTGCACTACAGGCCACAGCCATGGCAGCACTGCAGGATTCGAGGAACTCCCCACGCTGCAGTCTCCACCAACGGTGCTCACCCCGCCCTCGACGATCGTTTCGGCACCATCGCCCCAGCCCATGATGGTCTCGCAACACATAACGCTGCCCTCGCCCGAACAATCCGAGCCGGACTCCACGACGACATTACGGCAGTACCGGAAGCGAGGCGTCATTGTGGGTCCAATGCATTTGGCCACGCCTGCGGCATCGCCCTCGCCGTCATCGTCACCCTCATCCTCAACTTTTGATCATATACCGCCAGCATCACCAGCTACACCCGCTTCACCGGCTCCGCCTCAGTCacctgcgccgccgccgtctTCCGGATTGCCGGTGAGCGAGCTGCGGACAAACCATCAATGCCTCTACTGCGAAGAGCGCTTCACCAACGAGATTGCCCTTAAGAAGCATCACCAGTTGACCCACGGATCACAGACCACGATGCCGTTCGTGTGCACCATCTGCAAGCGAGGCTATCGAATGCGCACGGCTCTGCATCGGCACATGGAGTCCCACGATGTGGAGGGCAGGCCGTATGAGTGCAACATTTGCCACGTGCGATTCCCGCGGCCCTCGCAGCTGACGCTGCACAAGATTACAGTGCACCTGCTATCCAAACCACACACCTGCGACGAGTGCGGCAAGCAATTTGGTACGGAGAGCGCATTGAAGACGCACGTTAAGTTTCATGGTGGGATCGGTTACCAGTGCGACGGATGCGATCGGTCGTTCGAATATCTCAAGGAATTGCGCAGACATCGTCGTACCCACAAAGAGCTGTTTTACAAATGTGAATTCTGTCCACGGTCGTTTCTTcacttttcgatttttcgcGCACACATGAACTCCCATTTGCCACTGGGGGTATTTCTCAACGAGGAGACCATAGTAAAGACcgtcagcagcatcagcaacagcacaaacaacaacaataacagtaGCTCTAGGCTAGAAAATCCACCAACACCCATCGAGGAGACAACAGCCCCAATGAGTAGCAATAACAACGTATATAACGTCCAAAGCCCAGATGAATACCCAAATTCTGTAGAGAgctgtgctgctgctaccAATGTGGCTATGGAAACGATAGCACCAACGCCATAA
Protein Sequence: MAQFLMVAKFRRKCVRMQQRLQDFAQDLSDRQTARQAKRQQKQALKQQVPKNEEQKPTHQPERKRRMVSESDREAIAAAAAAEDTPTEVRRVLQDLPPPKARRLQLRKYRALSIGSQMDHPTNAIDASSIPWKTKAARKQISETWTWSSPSTESPNPSPDQDLKRCSSTERMSDLSVGPCCGFESDSSPSSTSTQATVADRLRFPKRLASIPRRGQRVRNSPVYNPTKRQKRSLIKKGQEEEEALLQIEAVAEENTKSDQMEVVFQAESKEENCAAIDSTSDIPKEQLSLENKEVNSNHIGDEDASEKESMDMSNSLTDSCNQEGSLMEEEAVNPKEVSKELEQYASSDKSKEGSAEAEEVSNYMCEEEAVNQKDTEIVNETKESPSKGSQERMDVTSDEGKDTISTEDILNKHLSSGLQSPDDPLQSEELTSSTECSEDQTESVDKPEIIVSIPLEVLDENLQRRLVVEQDTTEVKSTLKDHQSVQPDDVNNNANDENFCQSATADSFNSTVALRINEIEAKSGNWGGGAMYQNAEEEESPSAEESPPDESETDDDDDEIPVARSGPTPMDFMAEFAKHCENGIEQLKATTPAPSPTPSELPLPLNDLEAKQQLEVEMNDVETTLNGILNEMQDQHMYTPNCAHIDEFLTPADYAPLTEQEPSVASPPNPFEESPVVVVTESETKQPAANEDLFDNSNFSNELIGFQNDIPCFENIESSPEPGQQSLHLELTQLLSDLQPSQGESPSVETPVEVQTDAQVEVQVQSPNASETTLSLRDPTEQLEIQIQPETQSQMQHEILTVQSPEEHPQSQSHMEHQIVAVENQIQLHNSSQSLNTHQMLQAQTRIQNQVQQPTVQMMQQIQPQGYSQQLQLQSSQVMPHVQSQDTTTTVTYEQIYQQHIVQQTVQKSSNKVQLISLPSCAGETRQWQPQHQQHQQQVQWSSSHPVIGMPGATSISTKVHPIPATTPTGRPLTLKCRFCQNGPRFSNSLEYSRHIIELHPAVAPFNCPHCPLAFAGRSKRSQHILSHHVVQQYQCGQCSQVFPAQKALDLHIQRFHMPSKTAVDGVRVEDVQLQITNGGRQQQQQRRPQLPYQPRPYQPRQQRQPQRTPHYRAPLEQQPQQQQKLPVMQPSQPSSQSPHPSTMEVQASTTTPRKILCCPDCEDCTTGHSHGSTAGFEELPTLQSPPTVLTPPSTIVSAPSPQPMMVSQHITLPSPEQSEPDSTTTLRQYRKRGVIVGPMHLATPAASPSPSSSPSSSTFDHIPPASPATPASPAPPQSPAPPPSSGLPVSELRTNHQCLYCEERFTNEIALKKHHQLTHGSQTTMPFVCTICKRGYRMRTALHRHMESHDVEGRPYECNICHVRFPRPSQLTLHKITVHLLSKPHTCDECGKQFGTESALKTHVKFHGGIGYQCDGCDRSFEYLKELRRHRRTHKELFYKCEFCPRSFLHFSIFRAHMNSHLPLGVFLNEETIVKTVSSISNSTNNNNNSSSRLENPPTPIEETTAPMSSNNNVYNVQSPDEYPNSVESCAAATNVAMETIAPTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00524663;
90% Identity: -
80% Identity: -