Basic Information

Gene Symbol
-
Assembly
GCA_008042555.1
Location
VNJP01001340.1:42506-44323[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1e-07 0.00012 22.7 0.0 4 43 36 76 34 78 0.95
2 3 4.7 5.9e+03 -1.9 0.0 25 42 77 95 75 97 0.74
3 3 4.6 5.7e+03 -1.9 0.0 9 19 115 125 113 130 0.84

Sequence Information

Coding Sequence
ATGACGACGGGCTTTGGAAATGATCTGAACATGCGGGTGAAACGTGAACCGCTCTACATATCGTCGGATGATTTGAATGTCGATGATATATCGAGTGCACTCGTATGGACAGAAACAGAGAAGGACATCTTTTACGAATCGCTGGCAAGGTATGGCATCAAGCGTGTTGATGAGATTGCTAAGTTGCTGCCCCAAAAGTCAACGGCGGACGTGATGAACTTGTACAACGCTCTATCGAAGGAACTGAAAAAGTACAAATCGGATAAAAATTTGCGGAAAAAGTTGCTGACTTTTGATGACATGCCAATTGCATATGAAATGAGCAGGTTGTATGTTGAAACTGAAGAAAAATTTGCAAGTGCAATCGAAAAGCTAGATGAAGCCCAGTTTGGCTCACGTCAGGGCGAGTACCGTGGTAAGAATTACAGGGGCCTCGTCAATAGATGTAAAGAGCTATTCGATCTAAAGCATCTGGAGTCCCTGTTGAAGATAATAAACACTCTCAACTCTCCATCGAAGGAAGCCACAACCGGGGTAGCTGAGGCTTCGATCTTTGATCTATACGATTTGGTTTGTGATTACATATATGAACTGATCGATTACGGTAGTAAGAGACTGCACGGCCAAAGCTGGAAGCCGGAGTTTGGAGGGGCACCTCTTGTGTTCCAAAGCACACGTTGCCACTCCAACCTCCATAATCTGAAGAAACGAGCCGAGAGGAACCTGGCACGGGGATCAGACGGCATTGATGGAAATGTTTCTGATCTGTTCCGGTTTACGTATAATGATTATTGA
Protein Sequence
MTTGFGNDLNMRVKREPLYISSDDLNVDDISSALVWTETEKDIFYESLARYGIKRVDEIAKLLPQKSTADVMNLYNALSKELKKYKSDKNLRKKLLTFDDMPIAYEMSRLYVETEEKFASAIEKLDEAQFGSRQGEYRGKNYRGLVNRCKELFDLKHLESLLKIINTLNSPSKEATTGVAEASIFDLYDLVCDYIYELIDYGSKRLHGQSWKPEFGGAPLVFQSTRCHSNLHNLKKRAERNLARGSDGIDGNVSDLFRFTYNDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-