Dvul019846.1
Basic Information
- Insect
- Drosophila vulcana
- Gene Symbol
- -
- Assembly
- GCA_008042555.1
- Location
- VNJP01005330.1:38165-42304[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-10 4.7e-07 30.0 0.0 7 41 82 117 81 120 0.87 2 4 1.9e-14 5.7e-11 42.5 0.1 2 39 131 168 130 171 0.94 3 4 4.2e-18 1.3e-14 54.2 0.0 1 45 185 230 185 230 0.98 4 4 4.3e-20 1.3e-16 60.6 0.0 1 43 237 280 237 281 0.97
Sequence Information
- Coding Sequence
- ATGATAATAACGCCAGAGATTGTCAATATGATGTCCTCAGGACATATGGACATGTACAATTCGGACACGAGCGAGGATTCAATGATGATCGCCAACGGCTCGCCACACGATCAGAAGGAGCCGCACTATACGAATTTGGACCAGCAGCACGGtctgggcggcggcagcgtTTGTGGCCCGGGGCcaggtggtgctggtggtggtgggggcATGAGTGGTGgggctggctctggctctggcgaGAAAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCATGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGCTACGTTCAGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCGTCGACGCTCTACAAGATTGCCCGACGGGAGGGCATCCGCCTTGCGGCACCGTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAAAAAGCAAGCGCCGAATTTGGCATACCAACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCTGTGCGTGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTTTACGGCCGCTTCAAGCGTGGCAAATACGATGTGGTGGCCAACACGAGTGGCGTGGCGCTGCTTAACACCTCGGGCAATACCACTGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAACTCGTTGCACATGTTGCAGCAACAGTTCCCGTACAGCCCGTCGCCTCATCCGCCAACGCCGCAACATCACAGCACGCCGCAGCACCATAGCTCGGGGCAGGGGCCACCGACGCCGCAGcacatgcagcagcaacagcacgtGGTGCATATGCAACAGCAGTCGCCCCATCCGGGTCACCATCCGCAGCACATGCAGCAGGATGTGGTCACATCGAGCAGCCAGGTGGTGCacagccaacagcagcagcagcagcagcttcagcagaTCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
- Protein Sequence
- MIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGPGGAGGGGGMSGGAGSGSGEKALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSGQGPPTPQHMQQQQHVVHMQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00485052;
- 90% Identity
- iTF_00485052;
- 80% Identity
- -