Basic Information

Gene Symbol
ct
Assembly
GCA_008042555.1
Location
VNJP01002256.1:29381-46484[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4e-27 5.5e-23 81.4 0.0 3 72 506 576 504 581 0.95
2 3 6.1e-32 8.3e-28 96.8 0.0 3 75 917 990 915 993 0.96
3 3 2.5e-31 3.5e-27 94.8 0.0 3 76 1051 1125 1049 1128 0.96

Sequence Information

Coding Sequence
ATGGAGGAGCTGCAACGCCTGCAGGCCCTGGAGCAAACGCACCTGGTGCAGATCCAGCGCCTGGAGGAGCACCTTGAGGTGAAGAGACAGCACATCATTCGCCTGGAGGCTCGTCTCGACAAGCATCAGATCAACGAGGCCCTGGCGGAGGCCACCGCCCTGGCAGCCGTTACCGCtgccgccgttgccgctgccaataataataataacaacaataatagtCAGAGCAGTGACCACAATAAGCTAAGTTCCGCCGTCACCACCACCAAGGCCACCTCAGCATCCTCCAGTGATCCTGCGGAGAGCAGCAAGACCACCATCGCCACCACCGATTCCCAGGTGATGGACgccgatgaggaggaggaagaggacgaGGAGGTGGAGCATGAGGCCATGCTGGTGGATGCCAGCGAAGAGGTCAAGTCGTTGGAGAAGGTGAAGACGGAAGAGCGACAGCGGCGAATGGACGCcgatgaggaggatgaggaggacgaggaggaggatcagaTCAGTGAGGATCGGGCTGCAGATCGAAGGATTGTCAGCGATAGCAATGAgatcaaaattgaaaagatACAGCAcAGTCCTTTGGACCTTAATGTGCTCAGCCCGCAGTCGGCCatcgccgctgctgccgccgccgccgctgccgccgcctgtgCCAATGACCCCAACAAATTCCAGGAGCTGCTCATAGAGCGGACCAAGGCCCTGGCCGCCGAGGCGCTCAAGAATGGCGCCAGCGATGCCGTCAATGCCATTAGCGAAGATGCccaccaacaacaccaacaccagaGGGAACGTGAACGTGAGCGAGAACGGGAACGAGAACGTGAGCATCACCTGCACAGCAACAGTAGCAGCGGGAATAGCAGCTCATCGAACCACCATCCACACCACCCACATTcacaccagcaacagcagcagcagcagcatcaacatcaaGCGGATGGTCTGAACCACCATCATGGCCTCAATCATCATCTGCATGCTGGTTTGCTTCATTcctcggcggcagcagcagcagcccatcatcatcacctgCATCACCAGCATCAAGAGTCCAGCTCAAACTCCAGTGCCACCAGCACACCCACCgccggagctggaggagcagcagcaggagtcaCTGGTTCAGCAGGATCGGtaactggagctggagctgccgcCTTGAATGGCAGCAAAATCTTAAGCGAGGATGCCACCACCAATGGcttggctgccgctgccatgGCCGCCCATGCCCAGCATGCGGCAGCCGCTGCTGTGATGGGTCCCGGCTTCTTACCTGGTCTACCGTCTGCCTTTCAattcgctgccgctgcccagGTGGCCGCCGGTGGCGGCGGTGATGTTGTGGGTCGCGGACATTATAGGTTCGCGGATGCGGAATTGCAATTGCCACCGGGTGCCTCAATGGCCGGCAGGCTGGGTGAGTCACTGATACCCAAGGGTGATCCCATGGAGGCTAAGCTGCAGGAGATGTTGCGCTACAATATGGATAAATATGCCAATCAGGCACTGGATACCCTGCACATTTCGCGGCGCGTTCGGGAGTTGCTGTCGGTGCATAATATTGGCCAACGATTGTTCGCCAAATATATTCTGGGCCTGTCCCAGGGCACCGTCTCGGAGCTGCTCAGCAAGCCGAAGCCGTGGGATAAGCTGACGGAGAAGGGCAGGGATAGCTATCGGAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTGATGCTGCTCAAGTCGCTGATACCCAAGAAAGACTCTGGCCTGCCGCAGTATGCTGGTCGTGGTGCCGGCGGCGCTGGCGGTGATGATTCCATGTCCGAGGATCGTATCGCCCACATTCTGAGCGAGGCCTCTTCTCTGATGAAGCAGAGCAGCGTTGTtgtccagcaacagcaacagcagcagcagctggagcggAAGCATGAGCTGCTGCGTCACAGTGGTGCCGGTCTTGATGATTCCCATAGCAATGAGGATAGCAAATCGCCGCCACAGAGCTGCACTTCGCCCTTCTTCAAGGACAAGATGGCGAGACTGTACCAGGAGCTTATAGCACGCACTCCACGTGAGGCACCATTTCCCAGCCTGTTCTTCTCACCCATTTTCGGAGGAGGTGCCGGCATGCCCGGTGCCGCTGGCAACGCCTTTCCCGCCGCCATGGCCGATGAGAATATGCGACATGTCCTGATggccctgcagcagcaggtgctcAACGGTGCCCAGGATCTCTCGCTGgccgcagcggcggcagctgccaaGGACATCAAGCTGAATGGCCAGCGTTCGTCGCTGGTGGAGCACACcaccggcggcggtggtggcggcagcagcagcagttgctccAAGGATGGCGAGCGCGATGAGTCCGGTTATCCACCAGCCTCGCTGCATGGCCTCAAGTCCgagggtggtggtggcggtagCACACCGGCACCAGGACAGGCCCCAGTCTCAGGAGGGCCAGCTGTCAACTCGTCAGGagtgggagcaggagcaggagcaggtgtGGGGGCCAACAGCAATTCGGCGGCACCCAGTCCGTTGAGTAACTCCATTCTGCCGCCAGCTTTGAGCAGCCAGAATGAGGAGTTTGCTGCCACAGCCAGTCCCCTGCAACGGATGGCCTCCATCACAAACTCGTTGATCACCCAACCGCCGGTGACGCCGCATCACAGTACACCGCAACGCCCGACCAAGGCCGTGCTGCCGCCCATTACACAGCAGCAGTTTGATATGTTTAACAACCTCAACACGGAGGATATTGTGCGTCGGGTGAAGGAGGCTCTCTCCCAGTACTCGATCTCCCAGCGACTCTTTGGCGAGTCGGTGTTGGGTCTGTCGCAGGGCTCCGTTTCCGATCTGCTGGCTCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGACGGGAGCCCTTCATCCGAATGAAGATGTTCCTGGAGGATGAGAATGCAGTGCACAAACTGCATGCCATTAGCCTGCCACCGGGCAATCCTGGCCAGAATCAAAGCAACTCCCAGAGCCAGAATGCCCGAGAACTGCCAGAGAAGAAACCCATGCTGATGCCAGTGCATGGCACCAATGCCATGCGCAGTTTGCATCAACACATGTCGCCCACCGTCTACGAGATGGCTGCCTTGACCCAGGACCTGGACACGCACGACATTACCACCAAGATCAAGGAGGCATTGTTGGCCAACAATATTGGCCAGAAGATCTTTGGCGAGGCGGTACTCGGCCTCTCCCAGGGCTCCGTTTCGGAGCTGCTCAGCAAACCCAAACCCTGGCATATGTTATCCATCAAAGGTCGAGAGCCCTTCATCCGCATGCAACTCTGGCTCAGCGATGCCAACAATGTGGAGCGCCTGCAGCTGATCAAGAACGAGCGACGGGAGGCGAGCAAGCGACGCAGGAGCACCGGACCCAATCAGCAGGACAATAGCAGTGATACATCCAGCAATGATACCAATGATTTCTACACCAGCAGCCCGGGCCCGGGATCCGTGGGCTCGGGTGTGGGCGGCGTGGGTGGTGCACCGCCcagcaaaaagcaaagagTGCTCTTCTCCGAGGAGCAAAAGGAGGCCCTGCGTTTGGCCTTTGCCTTGGATCCCTATCCGAATGTGGGCACCATTGAGTTTCTGGCCAACGAGTTGAGTCTGGCCACGAGGACAATTACGAATTGGTTCCACAATCATCGAATGCGCTTGAAGCAGCAGGTGCCGCATGGCCAGCCGGGTCAGGACAACCCGATACCCAGCCGGGAGAGCACCAGTGCCACACCCTTCGATCCCGTCCAGTTCCGGATACTTTTGCAGCAGCGTCTTGTGGAGCTGCACAAGGAGCGCATGGGTTTGAGTGGTGCACCCATACCTTATCCACCCTACTTTGCCGCAGCTGCCTTGCTGGGACGCAGCCTGGCTGGCATaccgggagcagcagcagcagcgggagcagccgcagccgcgGCGGCAGctgtgggcggcggcggcggcggtgtggGTGGTGCCACCACCAGCGAGGAGCTGCAGGCCTTGAATCAGGCCTTTAAGGAGCAAATGAGTGGCCTGGATCTGTCTATGCCCACGCTGAAGCCGGCTGACGGCGGGGATTCGGATCATGAGCATGCCCAGCTGGAGATTGATCAGCGCTTCATGGAGCCGGAGGTGCACAtcaagcaggaggaggaccaggacgacgacgaggaggaggaccaggagcagcagcagcccagtCTGGAGGGTGCCAATGATGAGGCACAGCCCCAGCTGAAAGTGGTCAACGAGGAGAAGCTGCGGCTGGTGCGTGTACGTCGACTGAGCAGCACGGGCAATGGTTCCGCCGATGAGATGCCCGCACCCACGGCTCCGCTAGCGGCTTCGACTCCTGCTAAAGAGGTTGCCACAGCCAgcgcgagcagcagcagcagtcccctggctccaccagcagcagcagcagcagcagctgtgaCCGCCAGTTCTAGTCCTGCAGGATGGAATTACTAA
Protein Sequence
MEELQRLQALEQTHLVQIQRLEEHLEVKRQHIIRLEARLDKHQINEALAEATALAAVTAAAVAAANNNNNNNNSQSSDHNKLSSAVTTTKATSASSSDPAESSKTTIATTDSQVMDADEEEEEDEEVEHEAMLVDASEEVKSLEKVKTEERQRRMDADEEDEEDEEEDQISEDRAADRRIVSDSNEIKIEKIQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQELLIERTKALAAEALKNGASDAVNAISEDAHQQHQHQREREREREREREREHHLHSNSSSGNSSSSNHHPHHPHSHQQQQQQQHQHQADGLNHHHGLNHHLHAGLLHSSAAAAAAHHHHLHHQHQESSSNSSATSTPTAGAGGAAAGVTGSAGSVTGAGAAALNGSKILSEDATTNGLAAAAMAAHAQHAAAAAVMGPGFLPGLPSAFQFAAAAQVAAGGGGDVVGRGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGAGGDDSMSEDRIAHILSEASSLMKQSSVVVQQQQQQQQLERKHELLRHSGAGLDDSHSNEDSKSPPQSCTSPFFKDKMARLYQELIARTPREAPFPSLFFSPIFGGGAGMPGAAGNAFPAAMADENMRHVLMALQQQVLNGAQDLSLAAAAAAAKDIKLNGQRSSLVEHTTGGGGGGSSSSCSKDGERDESGYPPASLHGLKSEGGGGGSTPAPGQAPVSGGPAVNSSGVGAGAGAGVGANSNSAAPSPLSNSILPPALSSQNEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLHAISLPPGNPGQNQSNSQSQNARELPEKKPMLMPVHGTNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRESTSATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGGGGGGVGGATTSEELQALNQAFKEQMSGLDLSMPTLKPADGGDSDHEHAQLEIDQRFMEPEVHIKQEEDQDDDEEEDQEQQQPSLEGANDEAQPQLKVVNEEKLRLVRVRRLSSTGNGSADEMPAPTAPLAASTPAKEVATASASSSSSPLAPPAAAAAAAVTASSSPAGWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00617535;
90% Identity
iTF_00617535;
80% Identity
iTF_00617535;