Basic Information

Gene Symbol
Ubp1
Assembly
GCA_008042555.1
Location
VNJP01003777.1:74826-85493[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.7e-54 1.2e-49 169.2 0.3 23 187 355 516 334 521 0.92
2 2 1e-13 1.4e-09 38.1 1.2 186 222 574 610 569 611 0.92

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAACTCCGcGGAACAAATTCTACAACATCAACAATCACGCACGCTTTCAACAAAGTTcgatttaaacattttcaacgAATTCGACCAAATGgaattcaacaacaatttaaatcgCAATCAATATCagaaccacaacaacaataataataataatatcatcaACAATCAGAATCATAACTCCAACACAAACACTAATAACAGTGTAAGTGAAAATCTAAATCAGATCCAGAACCGCCACTTCATCAGCGGCTACCACCACCAGCATATTGGGTCGGATTATGAGCAAGTGATCAACTTTGTTGACTCGCCGCCAAACTCTGAGGAATCGTGGACAGAGACCAGCTCTTTAATCGAACAAATCACCATTGTCGTAGACGCCCAATCGAAGGACTCGCCGGGACCGCAGATCATTGACGTGCAAACCATTTACCTGAACAGCGGCTCACGCAAAAGACGAATGGATTGGGATTCCCTGGACATTGGCCAAAGTGAGAACTCACCAACAGCATCGCAGAGCGGCGAGCTGCCCACCAAAGTGGCCCACCAGGAGAAGGATAAGCACAAGCGGGAGAAGAACTCGGgccgcagcagctggagcGATGATATTGGCTTCGATCTGAATGCTGAGTTCAACAGCAACTCGTACTTGAACAATGAGAACTTCCTGGCGTTCTCGCCCACGCTGAGCACCCTGAAGCAGGAGCCGCAGACGGATCAGATCAAGCCCAGTTCCAAGATATCGTTGGACAATGCCGCTGGTTCTCCGTCGGTGGCCATTGCCAAGCTGGATGAGTCCCAGAACTCTCCGCAGCAGGCTAATCCTGGCCAGGACTCGACACCTGGCTCTAATTCggccaatggcaatggcaagcACGACGTGAATTCGGGCCTCATCTGCGGCTGTGGTTCACCACAGGGCTCGCCCTTGGCCAGTAGCGAGTATGACGTGAACGAGAAGGGCGCCAAGGTTcatccccagcagcagcagctcagcgTATTGGATCCGTCCAAGATTGAGCTTGGTACGGCCAATGGAGCCACCCACTCCGAGGACCATAAATTTCAGTACATCTTGGCTGCGGCCACTTCGATTGCCACTAAGAACAACGAGGAGACCCTGACGTACCTCAACCAGGGCCAGAGCTATGAGATCAAGCTGAAGAAGATTGGCGACCTGTCTCTCTACAGGGATAAGATATTGAAGAGCGTGATCAAGATCTGCTTCCATGAGCGCCGCCTCCAGTTTATGGAGCGCGAACAGATGCAGCAATGGCAGCAATCCCGCCCAGGCGAACGCATCATTGAGGTGGACGTACCGCTATCGTACGGCCTGTGCCACGTGTCGCAGCCGCTCAGCTCCAACTCGCTGAACACCGTCGAGATCTTCTGGGATCCCCTGAAGGAGGTCGGCGTATACATCAAGGTCAATTGCATTTCAACCGAATTTACCCCAAAGAAGCACGGCGGCGAGAAGGGAGTGCCCTTCCGGCTGCAGATTGAAACCTATATAGAAAACACAAACAGCACCAATATCGGCTCTGGTGGCGGTTCCGGCCTAGGAACAActgccggcagcagcagcaacaacagcgccACCAATGGAGGCAGTGGCAACGGCAGTGGCACAACCAGTGGCTTAACTAGTGGCTCCACAGCTCCAGCATCACCGGAACGTTCGCTCAATGGAGGCGGCGGACAGGCCAAGCAGGCAGTTCATGCCGCTGCATGCCAGATTAAGgtTTTTAAGCTAAAGGGCGCTGATCGCAAGCACAAGCAGGATCGGGAGAAGATCCAGAAGCGTCCCCAATCGGAGCAGGAGAAATTCCAGCCCAGCTACGAGTGTACCATCATGAATGACATATCCTTGGATCTGGTGATGCCCGCCACAACCACTGGCTGCTACAGTCCCGAATATATGAAACTCTGGCCCAATTCGCCCGTACATGTACCCAAGTACGATGGAATACTTCCGTTTGCCCCAAGTGCAGCATCGCCggcaaccagcagcagcagccccattGCCATCAACTCGGTGACGTCGACCAACTCACCGACTTTGAAGCTAATGGACGCCACTAATATGGTATCGCCGCAGCATGTGCCCGCCGATATGGACGACTATAGCCAGAACATTATGCCGGAATCGACGCCCGCTCAAGTGACGCAGTGGCTGACCAATCATCGCCTTACGGCCTATCTTTCAACTTTCGCACACTTCTCGGGAGCGGATATTATGCGCATGTCCAAGGAGGATTTGATACAAATCTGCGGCCTGGCCGATGGCATTCGCATGTTTAACATTTTGCGCGCCAAAACCATTGCGCCTAGGCTTACGTTGTACGCCAGCTTGGATGGCTGCAGCTACAATGCCATCTACTTGCTGTCTAACACGGCCAAGGAGCTCCAGCAGAAGCTTTTCAAGATGCCCGGTTTCTATGAGTTTATGGCTAAGGCCAGTGCCCAGGAGAATGGAGGTAgtgccgctgctgcggctgcatCTGCCCTGTACAACAATTGGAGCATGCACTCGAAGTACTCGGGCAGCGGCTCGAACATCTTCAATGATGCCAACAAGAGCTGCGTGTACATTTCGGGGCCGTCGGGCATTTTGGTCAGCGTCACCGATGAGGTGCTTAACAACGAGATCAAGGACGGCAGCCTGTACGCCATGGAGGTGCAGGCCGGCAAGGTGATCCTTAAGCTGATCAACAAGCAGGACAACAATTGA
Protein Sequence
MALSFLSQNSAEQILQHQQSRTLSTKFDLNIFNEFDQMEFNNNLNRNQYQNHNNNNNNNIINNQNHNSNTNTNNSVSENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTETSSLIEQITIVVDAQSKDSPGPQIIDVQTIYLNSGSRKRRMDWDSLDIGQSENSPTASQSGELPTKVAHQEKDKHKREKNSGRSSWSDDIGFDLNAEFNSNSYLNNENFLAFSPTLSTLKQEPQTDQIKPSSKISLDNAAGSPSVAIAKLDESQNSPQQANPGQDSTPGSNSANGNGKHDVNSGLICGCGSPQGSPLASSEYDVNEKGAKVHPQQQQLSVLDPSKIELGTANGATHSEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNSTNIGSGGGSGLGTTAGSSSNNSATNGGSGNGSGTTSGLTSGSTAPASPERSLNGGGGQAKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLVMPATTTGCYSPEYMKLWPNSPVHVPKYDGILPFAPSAASPATSSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYSQNIMPESTPAQVTQWLTNHRLTAYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASLDGCSYNAIYLLSNTAKELQQKLFKMPGFYEFMAKASAQENGGSAAAAAASALYNNWSMHSKYSGSGSNIFNDANKSCVYISGPSGILVSVTDEVLNNEIKDGSLYAMEVQAGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489142;
90% Identity
iTF_00608945;
80% Identity
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