Basic Information

Gene Symbol
XBP1
Assembly
GCA_008042555.1
Location
VNJP01010016.1:127977-129579[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-13 2.6e-10 40.7 19.7 2 51 76 139 76 160 0.75
2 2 6.3 9.1e+03 -2.6 0.0 34 45 290 301 287 306 0.72

Sequence Information

Coding Sequence
ATGGCCCCCACCGCGAACGCAGTTTTGATAACCGTGCCGCGAACAGCCATCACATCGAATACGCTACCCAAGCTGCGCCCCGCCCCCCTGACGGCGGCCCTGCTCAAGGCCTCCTCGCCCACGCCCTCTAGCTCGGGCTACGCGTCGTCCTCGAACATGGAGGACGAGGCCATGTCGGCGGTGCCGCCCAAGGCCAAGAAGCGCCGTCTGGATCACCTCACCTGGGAGGAGAAAGTTCAGAGAAAGAAGCTAAAGAACCGAGTGGCCGCCCAAACATCGCGCGACCGGAAGAAGGCTCGCATGGAGGAGATGGAGTACGAGATCAAAGAACTCACAGACAAAACGgaaatattacaaaacaaGTGCGACAGTCTGCAAGCCATCAACGAATCGCTGTTGGCCAAGAACCACAAGCTCGACTCGGAGCTGGAGGTCATGCGCCAGGAGCTCGCCGAGctgaagcaacagcagcagcagcagtacagAAGCATCGCCGCCACAAACAACCAGAGCACCAGCCAGTCCAACGCCAGCGCAGGCGTTGAGGGCTGGTACACAACAGGTGGACACACAGTCGTCAGCGCGTCTGCTGGCGGAGCAGCTGAAGAGCAGCCGGAGCTTGGCATCACTCTGGAAGGTTGTGGCGCTCTGCCTTCTCTACAAGACATGCTTGGCGACGACGAGGAATTCGACGTCAAGCGCCTCGAAGAGCTGGCCGAAAGTCTGCTCGCAGATATCACAGCAGACCTGGAGACAGGCGCTGGAGAGGGCGGCCCAGCTGCTGCCCAAGATGCAGGCGAAGCAGAGCGACTGTCTGGACCAATGGTGGGGTCCGCAGCAGAGCGCCTGGAATCCGGCGGGCATAGAGCTGATGGCCTGAGTAATGAAAATGCAACCTTGGAGCACAGTCACAGCCTAAATGTGCAGGTGTTGGAGGTAAATGGAAACCCCCATCAAGCAGCAACAGCGCCAGcctcgacgacgacgacagcgacAGCCACAATCACTACAGCCGCCTCACTTCTGCAGGCCACACCAGACACAGTGTATGGCACTTACGATGCTAAGACAAACTCAATCACCATAGTGATGGACGGCGATGCGGTGCCAGTTAACGAGGCCGTCGAGGAGATCTACTGCGATGGTGTTTCCGCTGGCGACGAGGATACGACTGACGTGATCATGAAGTGTCCCCCGCCAGCGGCGTCACCGTCGCAGGTTTACCTCAATGTGGTGAACGCCACTGAGGACGACTCGGACGACGAGAGCAGCCTTGAACCCATCCAGCGCTTTCTCTGTCCGCGAGTCAAGGCGATCTCCCCGCTGGCCAAATCTCCCGCATTGTCTCTCCACTCGGCCACCTCGGACCACGGCTACGAGTCCATACTGGGCTCCCCGACATCCACGGCCCTGACTCTGCccatcgaggaggaggatttCCTCTGGCAGAGCAACTTTGACGAGCTGTTTCCCAGCTTGGTCTAA
Protein Sequence
MAPTANAVLITVPRTAITSNTLPKLRPAPLTAALLKASSPTPSSSGYASSSNMEDEAMSAVPPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTEILQNKCDSLQAINESLLAKNHKLDSELEVMRQELAELKQQQQQQYRSIAATNNQSTSQSNASAGVEGWYTTGGHTVVSASAGGAAEEQPELGITLEGCGALPSLQDMLGDDEEFDVKRLEELAESLLADITADLETGAGEGGPAAAQDAGEAERLSGPMVGSAAERLESGGHRADGLSNENATLEHSHSLNVQVLEVNGNPHQAATAPASTTTTATATITTAASLLQATPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEEIYCDGVSAGDEDTTDVIMKCPPPAASPSQVYLNVVNATEDDSDDESSLEPIQRFLCPRVKAISPLAKSPALSLHSATSDHGYESILGSPTSTALTLPIEEEDFLWQSNFDELFPSLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00607562;
90% Identity
iTF_00489129;
80% Identity
-