Dvii012428.1
Basic Information
- Insect
- Drosophila virilis
- Gene Symbol
- stc
- Assembly
- GCA_007989325.2
- Location
- CM017605.2:21829674-21845031[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 3 1.4e+04 -7.6 4.6 6 10 73 77 72 77 0.56 2 11 1.6e-09 7.5e-06 25.5 12.9 1 19 83 101 83 101 0.98 3 11 0.73 3.4e+03 -2.1 0.3 5 10 131 136 131 137 0.86 4 11 1.9e-05 0.089 12.5 17.0 4 19 149 164 142 164 0.88 5 11 3 1.4e+04 -4.1 1.3 5 10 193 198 193 198 0.88 6 11 0.061 2.8e+02 1.3 12.0 1 11 204 214 204 226 0.79 7 11 2.2e-10 1e-06 28.3 15.1 1 18 231 248 231 249 0.97 8 11 1.4 6.5e+03 -3.0 0.9 6 10 278 282 278 283 0.81 9 11 3 1.4e+04 -6.7 10.7 10 18 296 305 285 306 0.78 10 11 1.6e-07 0.00077 19.1 15.0 1 16 342 357 342 367 0.93 11 11 6e-07 0.0028 17.3 12.4 1 19 374 393 374 393 0.96
Sequence Information
- Coding Sequence
- atgaaaattataaaaatctgCCGAGCTGCTTGCGATTTGAAAGCGAGTGGACTTTGGGACGTTTGTATGCTCCTGAGCGAGGtttttaggTGCAATGCCGACTTGCTTTTTTGCACTTTGCCACTGCCgtctcttttaatttttccgAATTTAGCGATCGGGCAGCAGCGCGAGGTGCAGTGCACCCGCGAGAGCCAGGATAAGCGCAGCTATTCGTGCAAAGAGTGCTGCAGCAAGCCGCTGCCCTGCGGCAATCATAAATGCAAGGATTCATGCCACGCCGGCGCTTGTCGTCCCTGCAAGCTGAGTCCCACACAAATCACCAGCTGCCCATGCGGCAAGCTGCCGGTGCCGGCAACGCAGCGCGCCAGTTGCCTGGATCCGGTGCCCACCTGCGAGGGCGTCTGCGGCAAAACGCTGCGGTGCGGCAAACCCGCGCATCCGCATCAATGCGCCAGCAAATGCCACCTAGGCCAGTGCCCGCCGTGCCCCAAGCAAACGGCAGTCAAGTGCCGTTGCGGCCACATGGATCAGATGATCAAATGCCGCCAATTGTCTACCCGTGCGGACGATGCGCGCTGCAAGCGGCGCTGCACCAAGAAACGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGATATCGATCACGCCTGCCCGTTGCCCTGCAATCGCACGCTCAGCTGTGGCCGGCATAAATGCGATCAGCCCTGTCATCGTGGCAATTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGCGGCGCCGAGGTCATCTATCCGCCGGTGCCATGCGGCACCAAGAAGCCCATCTGCAAGCGACCCTGTTCGCGGACACACGGCTGCGAGCATCCACCACAGCATAATTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACCAAGTGGTGTCATGGTAATCACGAACAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTTAGTTGTGGCCTAGCCTGCGGCAAGCCGCTCGCCTGCGGTCGCCACAAATGCATACGGCCCTGTCATGAGGGCGAATGCCAGCAGCCGGGCGAGCTGTGCCGCCAGAGCTGCACCAAGCCGCGTCTATTGTGCGGCCACAAGTGCGCGGCCATATGCCATGAGGGCGTCTGTCCAGAAACGCCCTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAAAGCCGCAGCTGCCAGGAGCTGGCACGGGAGCACAGTCGCATTGCCACCGCACAGCTGGCCTCCTCCATGGCGGAAATGTCGCGCGGCAACTACATGGAACTCAGCGAGATACTGGCGCCCAATAAGAACAATAAATCCAACAAAACCTTGAACTGCAATGATGAGTGCCGTCTGTTGGAGCGTAATCGTCGCTTGGCTATTGGCTTGCAGTCGCGTAATCCGGAGACGCAGCTCAAGTCGCTGACAAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGCGCTGACAAAGAGCGTCTATGAAACCCTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAAAAGTCGAGAAGTCACTCGTTTCCCACCATGAATCGTGAGAAGCGTCAATTGGTGCATGAGCTATGCGAAGTTTTTGGCGTGGAGTCTGTTTCCTACGACAAGGAGCCCAATCGCAATGTGGTTGCCACAGCGCACAAGGAGCGGTGCTGGCTCCCAGCCACTAGCATCATGGAGGTGCTGGCACGCGAATCCGGGCAACGTCGCGTGCCCGTGCCCAGCAACAATGCATGGAGCCTCAAAAAGTAG
- Protein Sequence
- MKIIKICRAACDLKASGLWDVCMLLSEVFRCNADLLFCTLPLPSLLIFPNLAIGQQREVQCTRESQDKRSYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPATQRASCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRPCHEGECQQPGELCRQSCTKPRLLCGHKCAAICHEGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLNCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -