Dvii013613.1
Basic Information
- Insect
- Drosophila virilis
- Gene Symbol
- srp
- Assembly
- GCA_007989325.2
- Location
- CM017605.2:19324411-19338361[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-17 5.9e-14 51.0 3.7 1 34 605 637 605 639 0.97 2 2 1.8e-18 4.1e-15 54.7 2.7 1 35 659 692 659 693 0.97
Sequence Information
- Coding Sequence
- ATGACCAAGACTAACAAAGCAAAGGACAAGGACAAGAGCAGTGCAATGCCGCGTGTGCCCAGCAATTTGTTGGCGAGTGCTGCCAAAATGAAGATCACCAAAGCGTTGGTCAATGCCAAAAAGCAAGCAGTGCAAAAAGGAGCGAACGGCGATAAGGCAACAGGATCAAatgtagcagcaacagccgcagccgcagcagcagcaacagcaacagccacaaccgCAGCCATAGCCACAGCATACGGTCAAGCGCAACAGGCGTTCGCTGTGAAAGAGACGACAATAGCGGCGCAGGAgaacggcgacagcgacagcaacgacgcgcataagcagcagcaacaacaacaagcagcgacgtcggcgtcgccgTTGTCGCCGCTTGCCACAGCGAATTTATCGTCGACATTTGAGTCGAAGGCTCACACATCAGTTGCCAGCGAAACAGCGAAGCAAGCGGTTACCAGCGCAGCAACACCAACGGAAGCAgaaacaacggcaacagcagcagcagcaacaacaacaacaacaacaacaacatcatcaacaaACATCGCAAATACCTATGTTTATGCTGAGAACAGCTTAAGGCAGCAGCCCAACAGTTGTGACGTCACTAGCAAAGATACGCTGAAGGATGAGTGCTTCGACGATAATCACAGCTCCAGCTATCACATGCTGACCGCCGTCTCTGATCTGCAGGTGCTTAAGGAGGCCAATGCAGCCATTTACTCCATGACGCACGATcagttgttgcagcagcaacatcagcagcagcagcagcagcagcagcatctgcatcaacatcagcatcagcatcaacaccatcatcatcatcatctgacgcaacagttgcagcatcATCATGCCCATGCGCAGCAGCATCACAACAACTCGGCCAGTTCGGTGGGTGGCGACTCGCCCTCGCCCTCCCACACGCTCGCCGCACATGCCAGCGatgtggcaacgctgcaaAGCTTTACACAGCTAACAAGCGCGCCGCCCAGCAGCGGGCTGCATCGCGACAGCTACGGCAGCCTCTCGCCGGATCACGGCAGCTATTTCAGTTCACCGCTCAGTCCGGTGCTGCAGACCAGCTCTGTCTATGCAAGTCCTTTGCTCGCATCGGCCGCCAATGGCATGCAGTATGGTATGCAAGCAATTGCCTcgcccacccacacacacgcccagctgcagcagcaacatcaccaaaaccagcagcagcaacatcagcaacagcagcaacagcagcagcagcagcaacatcatcagcatcacaATTCCACCAGCAGCAGTCCTGGCCCAGTGGGTCTGCACCACACGAGCGGCTCGGCGGTTGGGCACAGCTCGCTGCTGGACGACGGCTACGGATCGCCCAAAAGCAGCCACAGCGGCAACGGCGGAGGTGGCACCTTGCCCGCCTTTCAGCGCATTGCACCGGCCAGCGGCGGTGCCGGCTATGGCAACGGCGTGGCCAATGGCTCTGGCAGCGGCGCTGAACGGGCTTCTGGCTACGCATCGCTGGCCAATTACCGCACACACGCCGATGGTTGGAGTGGTCATTACGAACCAATTAGCTACGCGCCCAATGCCACCGGTCAGGGCGGGCAATTGGGTGGCAGCGGTGCAGCGGCTACCAATGTGATATGCAATCGACGCGCCgtcgctgccgcagctgcggcCGCAGCCGCTGTCGACGGTGCCGCCAACGCCGTTGATCCTGCCCGCTTCCTGGCCAACGCCGCTCATCTGTCTGCTTCGGCATCGCTAACAGCAACATTACTCGATGCCGATTTTTTCACTGAGGGGCGAGAATGTGTGAATTGTGGTGCGATTTCAACCCCATTATGGCGACGCGATAACACGGGACACTATTTATGCAATGCTTGCGGCCTGTATCATAAAATGAACGGCATGAATCGACCTCTAATTAAACAGCCTAGAAGATTGAGCGCCTCCAGACGTGCTGGCATGTCCTGCTCCAACTGCCAGACGAGCTACACATCACTGTGGCGCCGCAATCCAGGTGGCGAGCCCGTCTGCAATGCCTGCGGCCTCTACTACAAGCTGCACAATGTGGTACGTCCGCTGACCATGAAGAAGGACACCATACAGAAACGCAAACGCAAACCGAAGGGCACCAAGAGCGAAAAGTCCAAGAAGATGAGAACCACGCAGGCGGCTGGATTGGTGGCGAAcaacaatgccaatgccaatgcctgCCACAATGTGGGCATGCAGCTGGAGGGGCATGGCCAGCAAATGGATGTCAATGATGGTGGcaacattatcAGCCTGCAAAGTGCCTATCAACAGCAGGCGCTTGGTCAGACGGAGATGCCCTTGTGTAAATCGGCACTGAGCGGACGCAGCTCATCGCCCTATTATATAAATCATCTGGCCGAGGAGGAGCAGACGGCCATTATTAAACTGGAGCAGTTggatcaccagcagcagcaacagcaacagcaacatcaacagcagcagcagcagcagcagcagcatcagcaacacgATGAAATGTTGCTCAGTCGCACAACTTCCATCGATGAGCACTACGAACTGGCCGCCTATCATcgacaccagcaacagcagcagcagcagcagctacagcaacacacactgcagcaacatgttgcactCAGTCAGCACGAACAGCAGATTGCCAGCTATGCGCTACACGCagccgcacagcagcaactgcacgAATTTGGACGCAAATATGGCGTTGAGCGCGAGACAATTGTCAAAATGGAATAA
- Protein Sequence
- MTKTNKAKDKDKSSAMPRVPSNLLASAAKMKITKALVNAKKQAVQKGANGDKATGSNVAATAAAAAAATATATTAAIATAYGQAQQAFAVKETTIAAQENGDSDSNDAHKQQQQQQAATSASPLSPLATANLSSTFESKAHTSVASETAKQAVTSAATPTEAETTATAAAATTTTTTTTSSTNIANTYVYAENSLRQQPNSCDVTSKDTLKDECFDDNHSSSYHMLTAVSDLQVLKEANAAIYSMTHDQLLQQQHQQQQQQQQHLHQHQHQHQHHHHHHLTQQLQHHHAHAQQHHNNSASSVGGDSPSPSHTLAAHASDVATLQSFTQLTSAPPSSGLHRDSYGSLSPDHGSYFSSPLSPVLQTSSVYASPLLASAANGMQYGMQAIASPTHTHAQLQQQHHQNQQQQHQQQQQQQQQQQHHQHHNSTSSSPGPVGLHHTSGSAVGHSSLLDDGYGSPKSSHSGNGGGGTLPAFQRIAPASGGAGYGNGVANGSGSGAERASGYASLANYRTHADGWSGHYEPISYAPNATGQGGQLGGSGAAATNVICNRRAVAAAAAAAAAVDGAANAVDPARFLANAAHLSASASLTATLLDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNRPLIKQPRRLSASRRAGMSCSNCQTSYTSLWRRNPGGEPVCNACGLYYKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMRTTQAAGLVANNNANANACHNVGMQLEGHGQQMDVNDGGNIISLQSAYQQQALGQTEMPLCKSALSGRSSSPYYINHLAEEEQTAIIKLEQLDHQQQQQQQQHQQQQQQQQQHQQHDEMLLSRTTSIDEHYELAAYHRHQQQQQQQQLQQHTLQQHVALSQHEQQIASYALHAAAQQQLHEFGRKYGVERETIVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -