Basic Information

Gene Symbol
zfh2
Assembly
GCA_007989325.2
Location
CM017609.2:1121888-1139308[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.00014 0.0082 16.2 1.4 2 23 24 46 23 46 0.96
2 12 3.4e-05 0.002 18.1 0.7 1 23 78 102 78 102 0.92
3 12 0.006 0.36 11.1 0.4 1 22 197 218 197 221 0.91
4 12 2.2 1.3e+02 3.0 0.3 1 21 370 391 370 392 0.92
5 12 1.3 80 3.7 1.9 1 23 413 437 413 437 0.91
6 12 0.021 1.2 9.4 1.0 1 23 683 706 683 706 0.98
7 12 4.5 2.7e+02 2.0 0.1 10 23 835 849 826 849 0.80
8 12 0.052 3.1 8.1 0.8 2 21 932 951 931 955 0.89
9 12 2.8e-05 0.0017 18.4 1.4 1 23 1006 1028 1006 1028 0.98
10 12 0.0012 0.072 13.3 1.9 2 23 1035 1057 1034 1057 0.94
11 12 0.00013 0.0075 16.3 1.8 1 23 1773 1795 1773 1795 0.97
12 12 0.00059 0.035 14.2 0.4 1 23 1911 1933 1911 1933 0.98

Sequence Information

Coding Sequence
ATGCTGTTGAGCTCGGCGCGTCTCAACAGCGGCGTCCAGATGTCCACACGGAACTCCTGCAAAACCCTCAAGTGTCCGCAGTGCAATTGGCATTACAAATATCAGGAGACATTAGAGATCCACATGCGTGAAAAACACCCAGATGGAGAGAGTGCCTGTGGATACTGTTTGGCAGGCCAACAGCATCCACGACTGGCACGCGGAGAATCATACTCATGCGGATACAAGCCGTACCGCTGCGAGATTTGCAATTATTCGACGACCACAAAAGGCAACCTATCCATACATATGCAGTCCGACAAGCACTTGAACAACATGCAGGAGCTGAACAGCTCCCAGAACATGGTCGCAGTCGCCGCGGCTGCAGCGAGCGCTAAATTAATGCTCCCCAGCCCGTCCCCTCAAGGAGCAACTGGCCCAGGTCCAGTCGCAAGCGTCGGTGTGGGAGTAGGAGTGGGTGTGGGAGTTCCACAGCAAGCGACCTCGAGCTCCTCGAGCAGCGGCAATGTCGGTGTCATCGTCAGCAGCACAGCCAATTCGGCGATGAGTTCGACAGTTTCATCAGCATCCATGAAACCAAAGCCCTCGTTTCGTTGCGATATCTGTAGCTACGAGACGTCAGTTGCCCGTAATCTGCGCATACACATGACCAGCGAGAAGCATACGCACAATATGGCTGTGCTCCAGAACAACATTAAGCACATACAGGCATTCAACTTcctccagcaacagcaacaaggagCACCCGGAGCCGGAACTGGGGCCAACAGCTTTATGCCCGTGCCCGAGGTGGCCCTGGCCGATCTGGCCTACAACCAGGCGCTCATGattcagctgctgcagcaaaatgcccaacagcaacagctccagCAGCATCAGACCAACTCCTCTTCGAATAGCAAACTGTCGCCCACGTCGAGCTCCCCGGTGAGCACACCGGATCAGATGCATGCAACGTTTGCGTACTCACCGAACCCTCGGAAGATGCCGCAGAGTTTGAACCTGACCATGGGCATGGCCATAGACTCGAGCACATCCGGCGGGGGGGAGACGACGCTGGATGCATCGTATCCAGATAGCCTGCCAGAATTATGGCCGACAGCATTGTACAGCTGCCTGATTTGCGACTGCTTTAGCACAAGCGACCTGGACGAGCTGAATCAGCATTTGCTGGTGGATCGGTCGCGGCAATCCTCGAGCGCCTCGGCGGACATCATGGTcatacacaacaacaactatatatGCCGGCTGTGCAACTACAAGACGAACCTAAAGGCCAACTTTCAGCTGCACAGCAAGACGGACAAGCACCTGCAGAAGCTCAATTTCATCAATCACATCCGCGAGGGCGGCGCCCGGAACGAATACAAGCTGCAATATCAGCCACAGCTGGCCACCAATGTGGTCCAGCTGAAGTGCAACTGCTGCGACTTCCAAACGAACTCCATACAGAAGCTATCGCTGCACACGCAGCAAATGCGACACGACACAATGCGCATGATCTTTCAGCATTTGCTCATCATTATACAGAAGAGTCGTATGCGCAAAAGCTATAGCTCCGGCTCTCTCAGCCACGCGGAGCGGGAACGGGAGTCGCCCATGACGCATGACGGTGATCAGGAGCAGCCAAAGAAGGTGCTCTGCTGTCATCTGTGCAACTTTGTGGCCAAAAATCTGCACGACATGGTGCAGCATGTGAAGGGACTCAGGCACATGCAGGTGGAACAGTTCATTTGTCTGCAACGTCGCAGCGAAAACATCGAGATGCTCGGACTCAATGAGGTATTCATGGTGATCGACGAACTACCGGGCACCACCACTGAAGATCCAGGCCTTGACTGTGGACTTAATTTGGCAACGACAGCTGCCGTTGGATCTGGCACGGAAGTCGGATTCGGCGTGGCTAGTGCATCATCAACAGATGGCAATATATTTTCGCCCGCCTCCGTGTCCAGCTGCTCGACATCCTGCGGCAAGGCACAGCCACGAGTGCAATCTCCATTACCAATGGCTGGTGACCTACACCCGAGCCCTTCAACCACCGTTTTTAAATGCAACCTGTGCGAATATTTTGTGCAATCCAAAAAGGACATGGAAAGCCACATGGAGACGCTGCACCCAACAACGGAAAGCGATGACTATATCAGCATACCCACAAACACGGCGGCACTGCAAGCTTTTCAGACAGCCGTCGCAGCCGCTGCCCTGGCTGCTGTCCATCGCTGCAATGctagtgccacgcccacatcgaCAGCTGCTGAAGtggaggcggaggcggaggcggaggcggaggcACGTGGCGGCGACAGCGGTTGTCCCATTGATATTAAGCGTGAACGGCTGGAGGAAATCGATGATCCAATGACGAATAGTGCCGATCCTAAGGATAACAATAACGCCGACCTTGAGCTTGAGAGCAATCGGAACAAGAGCAGGCTGTCgccaaaaagtgaaaatatgCCCCAATCGGGTGTATCGTGCCCCCTATGCCTGGAGAGCGGTTATAGTGAGAAATCTTCCCTGGAAGCACATCTTATGAGCGTGCACAGTGTCACGCGAGATGGCCTTGCCAGGCTTCTGCAGCTGGTCAACCACAAAGCCTGGCGACCGTTAAGCAATCCGGATGCGGCTACAAGTGCCGATTCGGGTTCGGGTTCGACTGGATCCTCGGAAAGGGTGCTACAGGAGAACAAGTGTAATGTTGTCAATGCCGAAGATTAtgcatccacatccacacccaccacatcaacaacaacaacaacgagctgTACCGCCGGCGGTATGCAAGGCATCTCATGCCAACAGTGCGACGCAAACTTTAAGCACGAGGAGCAGTTGCTGCAACATgcccaacaaacacaacacttTCCAGTGCAAAACGGCGAATACCTTTGCCTGGCCGTCAGTCATATTAGCCGTCCCTGCTTCATGACATTTGCCAGCTTGCCGTCGATGATCGCTCACTTCAAGGACTCGCACATGAGCCTTGTGATCTCGGAGCGACACGTCTATAAGTACCGCTGTAAGCAGTGTTCGCTGGCGTTCAAGACACAGGAGAAGCTGACCGCACACATGCTGTACCACAGTATGCGGGACGCAACCAAATGTTCCCTTTGCCAGCGTAACTTCCGCAGCACTCAGGCACTTCAGAAGCATATGGAACAGTCGCATTCTGCCGAATGTACGGCTGTTATGGGCAGCAGTCCGCGGGACCTGTCACCCAGCTTCAGTTCTAGCGAAATGGAAAAGCCACCAACTGAGTCAAATGTTTTTGACTTTACCACAGCGCGTTCTAGTGAATCGGTTGGCAAGACGAATAAGTCTGTTAAGCAGTCCCCCCAGCGCTCTCGATCGCCATTTCAATTGGATACACAAACGAAGGATCAGCTTTCCGATCAGCTGTCGCCAAATGCGCTTGATGACCCATCAactgaacagcagcagcactttgCTGCGCTGACCGCAGCATTGcttaaacagcagcagcagcagcagcagcaggatgcAGATAATCAAATGGCCATGTCTCCCGGCGGGATGCATCAACTTCAGGTGAAACCTCTTCAGCACGGTCCATTCGGCAGCATCGGGAATCAGCAGTCATTTCACGGACTTCAGAGTATACAGAACTTGCAGCAAATTCAACAACAGCTGAGTGCCGCTGCGGCTGCATCGGGAATACCGATCAATCCGGTGGACATGCTCAATCTGATGCAGTTTCATCATTTGATGTCGCTCAATTTTATGAATCTAGCACCTCCATTAATATTTGGAGCCAACACTTCCAGCGGAAcaaccgcagcagctgcagcagctgcagcagcagcagcagtaaccgGAGGGATCCAGAACAATGGCATTGCCGGAGCCTCCTCGGCTGGCACCTcggcctgtctgtctgaccgCCAACAAAAATGTTCCGGCAGTGCAGGACCCTTAGCAAGTGATTCCGCCAGCATCAATATGATTCCACAGTCGAGTGTAACCAACAGTAACCAGcaacaaTTAAGCAGCAATCAGAAACGCGCACGCACCCGCATTACAGACGATCAGTTAAAGATATTGCGGGCCCACTTTGACATTAATAACTCACCCAGCGAGGAGAGCATAATGGAAATGTCACAGAAGGCAAATCTTCCAATGAAGGTTGTTAAGCACTGGTTCCGAAACACGTTGTTTAAAGAACGGCAGCGGAACAAAGACTCGCCATACAACTTTAATAATCCGCCGTCGACTACCCTCAATCTGGAGGAGTACGAACGCACTGGCCAAACCAAGGTGACCCCGCTGCCGGATGCGGGTGTCAGTAATCCGGTCCCTTTACCACCTGCATTAccgccaacaacaatatcaacagcagcagcaacaacggcggcggcggccatCAATGAGGCAGCTTCGACTGCGGTTTCATCAGAAGCGGCATCCACGACAAATTTAAGTGCTAACATATCGGATTATTTCAAGACGCAGGCTGAACTCATGAACGCCAAGCCGGAGCCGGAGAATTTGGGCGTGATGAGCTTGCCATTGGAGGTTCAGATAAAGGTCGAGCCCCAGGATGATGTTTCAGCTGGTGACTTTACGTTTCACAAAAACCAACGCcagctacaacagcaacaggagcaagTATTCGAGTTTCTTAAACAACAGCAGGCCGAGACGGCAGATCCGGCGAATCCCACCCCGAACGAGGACTTGATGCATGACCCCGCCTCGATACAGCACTATCAGAGCCAGCCccagcaccaacagcagcagcatcatcaacaGCAAACGAATTGCTTTGAGACGAAGTCGGAAAGCGGTAGTTCCGATGTTCTTTCGCGGCCGCCAACCCCAAATAGTGTAGCAGCCAACAATCTGTATAACAGTATGAACGATTTACTGAGCCAGCAGCTGGAGAATATTGGCAGCAACATGGGTCCACCTAAGAAACTACAAATCGCGGGTAAATCATTCGAGAAGCTATCAAGTACCGGCTCTGCATTGCCTtcagcatcatcatcggcGTGCGCCCAGTTGGAGAGCAACTCTTCGAACTCGTCAAACTCATCGTCGTCAACGTCCGGAGGAAAGCGCGCGAATCGGACACGTTTCACCGACTACCAGATTAAAGTGCTGCAAGAgttctttgaaaacaattcgTATCCAAAGGATAGCGACCTCGAGTATTTGAGCAAGCTGCTGCTTCTATCGCCACGCGTGATTGTTGTCTGGTTTCAGAATGCACGTCAAAAGCAGCGTAAAATCTACGAGAACCAACCGAACAATTCGCTCTACGAAAGCGAGGAGACCAAGAAGCAGAACATTAACTACGCCTGCAAGAAGTGCAACCTTGTCTTTCAGCGCTACTACGAGCTGATACGCCATCAGAAGAATCACTGCTTCAAAGAGGAGAACAACAAGAAGTCGGCTAAAGCTCAAATCGCCGCCGCCCAAATAGCCCACAATCTTAGCTCAGAGGATTCAAATTCATCCATGGACATCCATCATGCCGCTGGCGGGCCGGCTGGACTGGGCTTGGCCTCACAAAACGTGGCGGCTGCGGTTGCCGTGgccgctgctgcggcagctgcccaTTCTGGATCGCAGACGTTCGGCTCATCGCCCTCGCCGCAGCACCTGTTTAGCAAGGCCTCATCCCTAACCGATTTCAGTCCATCGACGACGCCAACACCGCCGCAGCGGGAACGCAGCAATAGTCTTGACCAGCAGAGACTGCCGAAATTTGAGTGCGACAAATgcgaaatgcaatttaatcaATTGGAACTATTGCGGGAGCATCAATTGATGCACCTAATGAGCCCAGCACTCTTTCCCGCTGGCCACCATCAGTCCAATCAGTCGGAAACTACCTACGGTCCCTTTGGCACCATATTGCAAGGTTTGCATCAGGCggcccaacagcaacagcaacagcaacaacagcagcagcaaaatcaaCAACCGCCTCCGGCAAAGAAAAGGAAATGCTCCGAAAGCTCATCCAAAGCGGAGGAGGCATGTATAGGAGAATTTGAGACTACACAGAAGAAATACGAGTTCCTATACCAATACTTTATGCAGCATGAAACCAATCCAGAACTGAAGCAGCAATTCCTTATCCAACAGCAGGGAAACGAGTCGGACCTGGAGCTGGAGTTCCTGAGCAATTTTTATCAGCAGAGCGAGCTGAAAAAGGTCAGCAGCTACGATTTTTTACTGCAATACTATCGCAAAAATGAAGATTCATTGAAGCACCAGTCCTCATTTAGCACTAGCAAAAAGCCAACCATTGAGTTTCTGCTGCAATATTATCAGCTAAACGAgtcgaaaaagttttttcagtTAGCTGCCTCGCCCCAAACAACACCTGATGGCACAGAATCGCAGCCGTCGTCGCATCAGCCGAACGCGACGGCGGATGAAGCAATCAAATTAATCGGCAGGCAAAAAAGTACACAAGAGCAGATGGTTAAACTAGAGCACGAATTGGAATACTATACCAGCCAGGAAAATATCAAAGCGGAGAGCTCCAAAAATGGACTTTGTACAGCGACCGAACAAAACGACCTGACGGATGATGTGCATCAAAAGCTAAATAATAATCACATCAATATAAATGTTGGTCCAAACGAAGGGCAGCTGACCTTTAACTTGCTGCGGGAcacaaaggaaaacaaaattgaGCAGATGGAAAACCTGGAAGTACCCGGTTCGACCGGATCCATGGATGCAGCTAATGGGGATAGGCAAAAATCACCTTTCCGTGGCAGCGAAATCATACGAAAAGCCGGCGATATCGAGAAACCTCAGTATTTTCAAAATCTGGAAGACTTTCTTGACGCGACCATGATTGAAAATAACTCGCAAATGTTGACATTTAATGACGACGATAATCTAAGCCCAAAGGTTGACAATGTCGCCCTATCTGCCGCCGCTGTAAAAGCGAACGATTGCCTGCCCCTGGACTCTTCGGTGCAGTTGAGCGCTCCTTCCAAGCAAAACAAGCGACTGCGAACCACGATACTTCCAGATCAACTAAACTTCCTGTATGAGTGCTACCAAACCGAGTCCAATCCTAGCCGCAAAATGCTCGAGGAGATATCCAAGAAAGTAAATCTCAAAAAGCGAGTCGTACAAGTTTGGTTTCAAAATTCACGGGCCAAAGATAAAAAGTCAAGGAATCAGCGCCAGTACGCACACATTTcggacgacaacaacagcttcGATGGATCCAGCGGCAAGGAggctggcaacagcaacagcaacaacagtaagAGTCAAGAGACGGCAGTGGCAATGGCAGCTGCCACCTCCGGCACGGAGGCCGATCTGCAGCTGCAGGACTGCCAATTGTGTCAGGTACCGCAGGTAAACATGCAGACGCACGCATTCAGTGTGGAGCACGTCTGCAAAATGAAAGAGCTCCTGGAGCAGACCAGCGAACTCTATGCCCACAGCAATGCCAGCGGCAGCGATGACAACGATTGCGATCGGGAGCGGCGATTCTATAGCCTCTCCAAGGCCTTCCTCCTGCAGCATATGGTGTCCAGTGTGAGTGGCAGCATGCCTGGCACTGAGCCCGGCACTGAGCCTCGCCTGCTGACAACGACGACTGCGACTGGGACGGCGGCGGCTAATGACTCCGCGAACGAGCCCGGCGCTGGTACTGGTGGTCGTCGCCACCTGGCCGGTGATATTGCCGTCTCTGTCAAGGATAGCGACGATCTGCCGGATCCGGGCAGAAAGAGCGCATCCGGCGGCAGTCGGGAGCTAATGCAACAGCTATTCAATCGCAATCACATCACCGGTAAGAATTGCGAACTTCGTCTAGTATTTTGA
Protein Sequence
MLLSSARLNSGVQMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQNMVAVAAAAASAKLMLPSPSPQGATGPGPVASVGVGVGVGVGVPQQATSSSSSSGNVGVIVSSTANSAMSSTVSSASMKPKPSFRCDICSYETSVARNLRIHMTSEKHTHNMAVLQNNIKHIQAFNFLQQQQQGAPGAGTGANSFMPVPEVALADLAYNQALMIQLLQQNAQQQQLQQHQTNSSSNSKLSPTSSSPVSTPDQMHATFAYSPNPRKMPQSLNLTMGMAIDSSTSGGGETTLDASYPDSLPELWPTALYSCLICDCFSTSDLDELNQHLLVDRSRQSSSASADIMVIHNNNYICRLCNYKTNLKANFQLHSKTDKHLQKLNFINHIREGGARNEYKLQYQPQLATNVVQLKCNCCDFQTNSIQKLSLHTQQMRHDTMRMIFQHLLIIIQKSRMRKSYSSGSLSHAERERESPMTHDGDQEQPKKVLCCHLCNFVAKNLHDMVQHVKGLRHMQVEQFICLQRRSENIEMLGLNEVFMVIDELPGTTTEDPGLDCGLNLATTAAVGSGTEVGFGVASASSTDGNIFSPASVSSCSTSCGKAQPRVQSPLPMAGDLHPSPSTTVFKCNLCEYFVQSKKDMESHMETLHPTTESDDYISIPTNTAALQAFQTAVAAAALAAVHRCNASATPTSTAAEVEAEAEAEAEARGGDSGCPIDIKRERLEEIDDPMTNSADPKDNNNADLELESNRNKSRLSPKSENMPQSGVSCPLCLESGYSEKSSLEAHLMSVHSVTRDGLARLLQLVNHKAWRPLSNPDAATSADSGSGSTGSSERVLQENKCNVVNAEDYASTSTPTTSTTTTTSCTAGGMQGISCQQCDANFKHEEQLLQHAQQTQHFPVQNGEYLCLAVSHISRPCFMTFASLPSMIAHFKDSHMSLVISERHVYKYRCKQCSLAFKTQEKLTAHMLYHSMRDATKCSLCQRNFRSTQALQKHMEQSHSAECTAVMGSSPRDLSPSFSSSEMEKPPTESNVFDFTTARSSESVGKTNKSVKQSPQRSRSPFQLDTQTKDQLSDQLSPNALDDPSTEQQQHFAALTAALLKQQQQQQQQDADNQMAMSPGGMHQLQVKPLQHGPFGSIGNQQSFHGLQSIQNLQQIQQQLSAAAAASGIPINPVDMLNLMQFHHLMSLNFMNLAPPLIFGANTSSGTTAAAAAAAAAAAVTGGIQNNGIAGASSAGTSACLSDRQQKCSGSAGPLASDSASINMIPQSSVTNSNQQQLSSNQKRARTRITDDQLKILRAHFDINNSPSEESIMEMSQKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQTKVTPLPDAGVSNPVPLPPALPPTTISTAAATTAAAAINEAASTAVSSEAASTTNLSANISDYFKTQAELMNAKPEPENLGVMSLPLEVQIKVEPQDDVSAGDFTFHKNQRQLQQQQEQVFEFLKQQQAETADPANPTPNEDLMHDPASIQHYQSQPQHQQQQHHQQQTNCFETKSESGSSDVLSRPPTPNSVAANNLYNSMNDLLSQQLENIGSNMGPPKKLQIAGKSFEKLSSTGSALPSASSSACAQLESNSSNSSNSSSSTSGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRKIYENQPNNSLYESEETKKQNINYACKKCNLVFQRYYELIRHQKNHCFKEENNKKSAKAQIAAAQIAHNLSSEDSNSSMDIHHAAGGPAGLGLASQNVAAAVAVAAAAAAAHSGSQTFGSSPSPQHLFSKASSLTDFSPSTTPTPPQRERSNSLDQQRLPKFECDKCEMQFNQLELLREHQLMHLMSPALFPAGHHQSNQSETTYGPFGTILQGLHQAAQQQQQQQQQQQQNQQPPPAKKRKCSESSSKAEEACIGEFETTQKKYEFLYQYFMQHETNPELKQQFLIQQQGNESDLELEFLSNFYQQSELKKVSSYDFLLQYYRKNEDSLKHQSSFSTSKKPTIEFLLQYYQLNESKKFFQLAASPQTTPDGTESQPSSHQPNATADEAIKLIGRQKSTQEQMVKLEHELEYYTSQENIKAESSKNGLCTATEQNDLTDDVHQKLNNNHININVGPNEGQLTFNLLRDTKENKIEQMENLEVPGSTGSMDAANGDRQKSPFRGSEIIRKAGDIEKPQYFQNLEDFLDATMIENNSQMLTFNDDDNLSPKVDNVALSAAAVKANDCLPLDSSVQLSAPSKQNKRLRTTILPDQLNFLYECYQTESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKKSRNQRQYAHISDDNNSFDGSSGKEAGNSNSNNSKSQETAVAMAAATSGTEADLQLQDCQLCQVPQVNMQTHAFSVEHVCKMKELLEQTSELYAHSNASGSDDNDCDRERRFYSLSKAFLLQHMVSSVSGSMPGTEPGTEPRLLTTTTATGTAAANDSANEPGAGTGGRRHLAGDIAVSVKDSDDLPDPGRKSASGGSRELMQQLFNRNHITGKNCELRLVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616721;
90% Identity
iTF_00616721;
80% Identity
iTF_00616721;