Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_007989325.2
Location
CM017608.2:21143899-21150503[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.7e-25 1.4e-21 76.4 0.0 2 89 80 166 79 166 0.93
2 2 6.3 1.3e+04 -3.7 0.0 28 65 1616 1655 1605 1667 0.70

Sequence Information

Coding Sequence
ATGAAATTTACCACATTTGATCGGGATAACGACAAACGCGACTTCGATAACTGTGCAATAGAGCGACACAGTGGTTGGTGGTACAGTCAGTGCGCACGATCAAATCTGAACGGCCGATATTTTGACAGAGAGTTGGACAAATGGGAAGGCATTTGGTGGTGGAATTGGCAAGAAACGCGCACTCTCAAGTCCGTGCAAATGCTGATTAGACCAACGATCAATTCGACGCTCAGGGCGCCGGAGGAATTCTGGCGTGATCTGCACCAGTTTCACGAGCGGCGCGGCACTCCGCTGACGCAGGCCGCCAAGATTAGTGGTCAGCACGTGGATTTGTATCGACTGTACCAGGAGGTCACGGAGCGCGGTGGCTTCAATAAAGTGAACATGCGCGATGAGTGGGACGAGGTGTACAGCGCGCTGGACACGCTGCGGGATCGTTGCGTTAATGGCACCGCTGGCATTAAGCATATATATCGTCGCTATTTGGATAAATACGAGCGCCTGAACTTTTTGGGTGAGGATCCCGACAAGCTGGAGGCCTTGGAGGCGGTCATCGAGTGCGCTGATCTGGGCGCCAGCGCCAGTCGTGCGCGTTCACGTGCCTTGGCCGGCGGCGGTGTCGGGGGTGTAGGTGGCAGCTTAACTGGCGGCGGCTGGGGCAGCATTTTCGGCATGCCGCACTCCACGCTGACGGCCGTGCCCATGGCGTATAACCAGCGCCAGCATATGGTGAATGCGGATCGCCGACGACAGTATAAAATGTCCACACAGCTGCACAAGCACAGCAGCTATGAgaagctgctgttgtcgcttaTCTCACCGCTGCCCAACGAGCAGGACTTTGCCATCAATGTGTGCACGCTGATGGCCAATGAGCAGCGTCCAACGCTGCAGCTGAACGAGTGCCCCAAGCTGCTGGATGTGCTGCTGGCGCATTTGGGCGTCTATGCGGATTACAGCATGCGTCAGCTGTTCCAGCATGGCCACAACAATGCTGGCATGCAGGTGCGACGTCACTCGAAACTTAACTTCTGGCGGGATTTGCTCTACGATAAGCCACAAATTCTGGACCTCTACACGGACGAACAAGCCTGGCTGGACAACGGACTGATCAACAAGGAGACCGACGCGTGCAATGATTATCTGTTTCAATCGGATGAGCTCGATTTCGAGCTGGACTTTTTAAATTTACGTCGCAGTCATGGCACGGATGAGCGCATTGGCCAGCGTGTGCTGCAAATTGTTCAGCTATTGCGCAGCTTGAGTTTTCATCAGGACAATGTAACGCTGCTCGCCTCGAATCGTACGCTCTGGCGGTATCTGGTCATGGGTGCCAATGTTCGTTGGAGCAACATCCATATTCAGGCACTGGAAACGGCTGGCAATCTGGCGCAGCAGTTTGACCTGCTGGATCCCGCCACGGACGAGCTATCGCGCAATCTGCTGGCCACGCTGTGCGAGGGCGTCGAATCGAATGATCGCGCTGTCATCATCAGCTGCCTAGAGATACTCTACAAACTGTGCGGACGCGAGGGCAATGCCCAGCACATAAATCGTTGTCTTGGCTTGGATTTCTATCAGCGTGTGATGCTGTTGCTATCGCTGACCGATGTGATGCTTTTGATTTTCACGCTGGAGGCGATCTATGCGTTGAGCTCTTTGGGCGCGCGTCCCTGCTCGATGCTGATGCAGGTGCGCGGTCTGCTGGATCAGCTGGTGGCTTTGCTAACCGTCGAGGCGCAATCGTATGGCGCGGCTGGCTGCATTTTGATGCGCGTCGTGGAGGTGGTGCCGGGCAATATGTTGTCCACACTGGCACAGACCATACCGGGCACTCAAATGACACAGCTGATGACGGtcaagcagccgcagcagccagcGCCGATTGCTGCACTGCCGCCGCCAGCGCCAACACAGGTCCAAGTGTTACCGCCACAGCCAGAGACCGTTTCGGTGTCTGTGCCTGCGCCTGTTCCCACCACTACGCCCGCGCCCGCGCCCGCCGCTGTGTCTCTGCCTGTGCCTAGTTTGCCGCAGGTGCAGCTGCCTATGCCCAGTTTGCCGCAGGTCCAGCTACCGCCACCGCCAACCCAACAAGTATCGATGCCTGCTCCAGCAGCCGGCACAGTTGTGCTGCCTGGAACGCTGCCCGCAGCGCCCTCAGCGCCGCAAAGCTTTACCCATGATGATGAGACCTATGCGCTGGCCTGGCTGGGTGCCACCTACGAGCGCGCCGGCAACGGTCATGAGTATCGCGTCGAGCAACAGGAGCTGTATACCATTTACCTATCGCACTGCCAGAAGGCGGGCAAACTTTCCGTGGTTAATCGGCTGCAATTTCCGCGTCTCGTGCGGCTCATATTTAATGCAAGCGTGGGTCCAGCCATTGTGCGCCAGATGGACGGCACCGATCTGCCAGGCACGCACTATGTGGGCATAAGGATGCGTGCTCAGCCTTTACccatgcagcaacagcatcagcaacaacaacaacaacagcagaaggcagcggcagcggcgacagcaacagctgccaaaaAGGAGCCAGCGCTGGTGCCCAAATCAGAGACAACAGTTGTAGACGCATCTGATGAAGCTACAGGGACACAGACGCCCAGCTCATCGCTGATTAAGAGCCTGCTGGCAAATAAAGTTAACGAGCGGCAGCTAAAACAAAAGGCTCAGGCCCAACCGCCTGCGCTGGTGGCCACGACAGCCTCGGCAACGGGCTCCCCGGCCAGCCAACCCATTAAGGTGACCTCCACGGCAATTAGCGCCTTTGTCAACAATCCGCTGATGCAGCACACGCCCGTCAAGGTGGGTCAGACCACCATAAAGCCGTTGCATCCGCAGCTGGCGCTGGAGAAGAAGCCAATGACGGATTCAGCGCCACCGCCGCTGGCGCCATTAAGCGGCTCCAATGTGCTTACCAAGGATGCGCAGGGGCGCACCGTAATTATACAATCCAAACGCAAGCTGACCATCGATGAGGAGCAAAACAAGCGACTGGCATTggatagcagcagcaacacgccCGCTGGCAAAGATGAGCCGCAGGTGACGCCCTCGAAGAATGCGGCCAATCTCTACGCAGATTTGGCTGCCTCGATACTAGAGGATGAGGACTTGGACGATGTGCCGCCGCTGGCAGCGTCCAgtcaagagcagcagcaaacgactctgcaacaacaacaacagcagcaacatcagcaacatcagcaacaacatcagcagcagcatcaacagcagcaacatcaacaacaactgcagctcaTACCCGCTAAGGTACAGCCCGCACAGCGTCAGCTCATCTTTCCCGCTGGCAGTGCGGGAGCGCCACCGCCGCAGCTGAAATTGGCCACCACGGCGACCATTAAAACGGATCAGGGCTTGCAAACGGTGCCGGTCATATTGCAGAAgacagagcaacagcaacagcagcagccacagcagccgaCGCAAACACAATATGTGCTGGCCACCAATCAGCAGGGACAGACCTATCTGGTGGCACAGCAAACGGCACcagtggcagcggcggccAATACgccggccacgcccacgctgCTGGTTACCCAAGCGGCGCAGCAGCAGACCAAAACAATTATCATATTGCAACAGCCGGGTGTCAGTGCCAGCAATGTGCCCGGCACACAGAAGGTCATAATGACCACAGCGCAGGGTCAACAGGTGCTGgtgacaacaacgacagcgcCTGCGGTCGGCCAGCCACGGCCCGCAGCCCAAGTCcaacagcagttgcagcaacagcaacaaatctTTCTAAATCCGCAGCGTACGGTGCCCGCCGCCTTGGGTGCTGGTCAAATGTCGCCCTCGCTGCTCTCGCAACTCAATCAGATACCCGCCACCATAAAGCTGCATCAGCCGCAGCCGTCGCAATCACCGCAGCTGCATCGTGGCGGCATTGTGGCCACCAAGACAGCGCCCATaccgcaactgcagcagcatcagtcCATTATACAGCAGCATATCATCTCCGgcccggcggcagcggcagagaaACGGCAGCTGCTCCTAGGCGGCATCAAGGAGACAACTCTCATCACACAAACGCCCGCCACGGCTGCACCACTGCAGCAGAGTCAACTCAACTCGCAGACAATCATTACCACACAGCCGCCGGCAGCTACCACACCGGTTGTTGGCgctgcactgcagcagcaacagcagcacatacgcagcgtgctcgagcagcagcagcagcatcatccaTCCATAATACAGCAGAAGATAACTATGCCCACAGTGCTAACGGAGACGGTCAAAGCTAAAgctgcgccagcagcagcaaccattGCCAAGAAGCCGATGGCGCCGCCAACGTCGTCGCTGCctgtgcagcaacaacagcagcagcaaccggtGCAAATGCCAGCGCTGAAATCtacacaacaactacaacaacaagcgcagTTGGTCAGCAGCGAGTCTAAGCCCAGCATTATGATTGAAGCCAAGCCGGCGGAGCAATCCACAAttacagcaacatcaacagttgcagcaatgcccgcaacagctgccacagcAATTGCCTctaccacaacaacagcaacgagcaTTGTCAGCAATAGCAATCCAACAGCAGCGGGAGCAGCTGCCAGCGCTGTGCCCGTGGATGTCAATTGGCTGTTCATTTGCGATTGGCGCAATTGTCCGCGTCGCAAATTCAAATCGCTCAACGAGCTGCAGCATCATGTCTGCAATGTGCATTGTCCGGATCATTTGGATTCCGGCGCTGAGATCTACTGTCAGTGGGGCAGCGGTCCCAGCTTGTGTGACAACATAGCCCGTAAGCGTTACTCACTGATGACGCATCTGGTGGATCGTCATTTGGCCCTGGATGATCTGCGTGCCAGCGTGCAGCGTCGCCTTGCCACGGGCATACACAATGTGGCGCCCACCCAGCCAACGGTCACAATTGTGCGCAATGTGGGCAATGCCAGCAATGCGCCCGCatcaacagcggcaacaacagctgctgctgcgccagcGACAACGGCCACGGCTGTGGGCACCTCGGCGCTGCAGGCCATTAAACGACACTCGGCCGACTTTCTCAACTCCAAGGAGCTATTGGATGAGAACGAGGGCCCAGTCACAAAGAGCATACGCCTCACGGCGGCGCTGATATTGCGCAATCTGGTCAATTATACGTCGACGGCCAAGCGCAGCCTCAAGCGGTATGAGCCCCATCTGGCCAATGTGGCATTTAGCAATGTGGAGGCCAGTGGCGTCCTCTCCCACATACTGCACGAGCTCAGTCAGTAA
Protein Sequence
MKFTTFDRDNDKRDFDNCAIERHSGWWYSQCARSNLNGRYFDRELDKWEGIWWWNWQETRTLKSVQMLIRPTINSTLRAPEEFWRDLHQFHERRGTPLTQAAKISGQHVDLYRLYQEVTERGGFNKVNMRDEWDEVYSALDTLRDRCVNGTAGIKHIYRRYLDKYERLNFLGEDPDKLEALEAVIECADLGASASRARSRALAGGGVGGVGGSLTGGGWGSIFGMPHSTLTAVPMAYNQRQHMVNADRRRQYKMSTQLHKHSSYEKLLLSLISPLPNEQDFAINVCTLMANEQRPTLQLNECPKLLDVLLAHLGVYADYSMRQLFQHGHNNAGMQVRRHSKLNFWRDLLYDKPQILDLYTDEQAWLDNGLINKETDACNDYLFQSDELDFELDFLNLRRSHGTDERIGQRVLQIVQLLRSLSFHQDNVTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAQQFDLLDPATDELSRNLLATLCEGVESNDRAVIISCLEILYKLCGREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSSLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLSTLAQTIPGTQMTQLMTVKQPQQPAPIAALPPPAPTQVQVLPPQPETVSVSVPAPVPTTTPAPAPAAVSLPVPSLPQVQLPMPSLPQVQLPPPPTQQVSMPAPAAGTVVLPGTLPAAPSAPQSFTHDDETYALAWLGATYERAGNGHEYRVEQQELYTIYLSHCQKAGKLSVVNRLQFPRLVRLIFNASVGPAIVRQMDGTDLPGTHYVGIRMRAQPLPMQQQHQQQQQQQQKAAAAATATAAKKEPALVPKSETTVVDASDEATGTQTPSSSLIKSLLANKVNERQLKQKAQAQPPALVATTASATGSPASQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLALEKKPMTDSAPPPLAPLSGSNVLTKDAQGRTVIIQSKRKLTIDEEQNKRLALDSSSNTPAGKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLAASSQEQQQTTLQQQQQQQHQQHQQQHQQQHQQQQHQQQLQLIPAKVQPAQRQLIFPAGSAGAPPPQLKLATTATIKTDQGLQTVPVILQKTEQQQQQQPQQPTQTQYVLATNQQGQTYLVAQQTAPVAAAANTPATPTLLVTQAAQQQTKTIIILQQPGVSASNVPGTQKVIMTTAQGQQVLVTTTTAPAVGQPRPAAQVQQQLQQQQQIFLNPQRTVPAALGAGQMSPSLLSQLNQIPATIKLHQPQPSQSPQLHRGGIVATKTAPIPQLQQHQSIIQQHIISGPAAAAEKRQLLLGGIKETTLITQTPATAAPLQQSQLNSQTIITTQPPAATTPVVGAALQQQQQHIRSVLEQQQQHHPSIIQQKITMPTVLTETVKAKAAPAAATIAKKPMAPPTSSLPVQQQQQQQPVQMPALKSTQQLQQQAQLVSSESKPSIMIEAKPAEQSTITATSTVAAMPATAATAIASTTTTATSIVSNSNPTAAGAAASAVPVDVNWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDSGAEIYCQWGSGPSLCDNIARKRYSLMTHLVDRHLALDDLRASVQRRLATGIHNVAPTQPTVTIVRNVGNASNAPASTAATTAAAAPATTATAVGTSALQAIKRHSADFLNSKELLDENEGPVTKSIRLTAALILRNLVNYTSTAKRSLKRYEPHLANVAFSNVEASGVLSHILHELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00493429;
90% Identity
iTF_00530738;
80% Identity
-