Dvil012176.1
Basic Information
- Insect
- Drosophila villosipedis
- Gene Symbol
- -
- Assembly
- GCA_035043025.1
- Location
- JAWNNF010000032.1:1331508-1332869[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-10 2.7e-07 30.1 0.0 1 44 125 168 125 169 0.91 2 2 2.1 2.9e+03 -2.0 1.2 4 20 269 284 268 284 0.86
Sequence Information
- Coding Sequence
- ATGAATCCGCTCAAGCGCAAGAAACTCTCGGCCATTTCGAGCATGCTGCTCAATTCCACACGGGACACGCCCATCTTGCGCAACGTGTTGGCTCAGACGAATACGGCGGACTCCTCGCAGccggcgcagcagcagctgctgagcGAGAAGACGCCCacccatcagcatcagcaccagcatgccgctgcagcagctgctgctgctccacatcCGCATCACGGCAGTGGCAGTCACAGTTTCAATGGCTCCGACTATGGCGGCGACAAGGAGCCTCTCTCGCCGCACACGGATCGCTCCTTCGACGAGGAGACGGGCGGCATCGGCGGACCAGGCGGCGGCAAGAAGCCGGAATGGAAACGCTACAAGCAATACACCCGAGCGGACATGATGTGTGCGATTCAGTGCGTCCGCGAGGGCATGAGCGCCCTGCAGGCCAGCCGCAAGTTCGGGCTGCCCAGCCGCACGCTGTACGACAAGGTGCGCAAGCTGAACATCACCACGGGGCGTGGCACACATCGCACGCCCAAACGTAGTCCGCCAGGTGGCGTTGAATCCTCCGCTGCGTTTCCCTATTCcgctgcggcggcggctgctgctgcggctgctgctgcagccgctgccCAGAACTATGGTCAGTCGGAGCTGGAGCGGGAGTCgaaggagcagcaacagcacggCCAGCATGGTCAGCACGGGCATCCGCACCATGGCATGCCATCCACAATTCCACACTCGGCTGCCGCTCTGCTGGACCATGCCTTTCTGCAGCAGGACATGGCTGGCCGCGAGGCGTTGCATGCCATGGCtttggcggcagcagcacacGCGGCAGCCAACCGCATGTCGACCAGTCCGCCCGGATCGAATGGACACGCGGCATGCCGCTCGCCCAGCCACTAtggcgaggaggaggaggcgtcCACGACACTGGAGAAGCACGAGCACGACCAGGAGCTGGAGCGTCTGATTAAGCGCGAGGCGCTGGAGGAGGAGCGCGATGcggacgatgaggatgatcTGCACGATCAGGTGGAGGATCTATCGCTGGCTGGTCGCAAGGAGCGACCAGAATCACCCTATTccccgccgctgccgccgccgcagccggAGAGTGCTGGCGTCATTTTGCATGCGGCGACCACAAATGGCGCCAAGGAGCAGACGGAACTGGCTGACTACAGAGATGTGGAGTCGCCACCAGCACCGCCAGTTAGGGATCTGAAACGTGAGCTGCTGGGCAGCGATGAGGCGACTCTAACCGAGGCACAGGAGGCACAGGCAGACCACGACTCCATCTACTAG
- Protein Sequence
- MNPLKRKKLSAISSMLLNSTRDTPILRNVLAQTNTADSSQPAQQQLLSEKTPTHQHQHQHAAAAAAAAPHPHHGSGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGIGGPGGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGGVESSAAFPYSAAAAAAAAAAAAAAAQNYGQSELERESKEQQQHGQHGQHGHPHHGMPSTIPHSAAALLDHAFLQQDMAGREALHAMALAAAAHAAANRMSTSPPGSNGHAACRSPSHYGEEEEASTTLEKHEHDQELERLIKREALEEERDADDEDDLHDQVEDLSLAGRKERPESPYSPPLPPPQPESAGVILHAATTNGAKEQTELADYRDVESPPAPPVRDLKRELLGSDEATLTEAQEAQADHDSIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00576988;
- 90% Identity
- iTF_00576988;
- 80% Identity
- -