Basic Information

Gene Symbol
grh
Assembly
GCA_035043025.1
Location
JAWNNF010000020.1:5493378-5525481[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.6e+04 -13.9 18.7 78 126 246 293 180 303 0.47
2 3 2 1.6e+04 -5.3 2.3 96 99 572 575 553 591 0.45
3 3 2.8e-63 2.3e-59 200.3 0.5 24 221 706 898 692 900 0.94

Sequence Information

Coding Sequence
ATGATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGACTGGATAGCTGAGTCACGGCGCTATACCTTGGAGCCTGCACAGCAAGCAACGCCGCCCccgccaccagcaccaccacagcagcagcaacaccagcagcaacaccagcagcaacagcagcagcagcaacttcatcatcagcaacagctgcatccgcatccacatccacatcttCAGCTTCAAGCACACCATCttaatcatcatcagcatcatcatcagcattatGCGAGTCAATCGCCACCGCATTACTCGTATGTGCCGCCGCCCAAGGATGCATCAGCTCAGTTGCAACAGCATCTGCCGCTGACCGCCGCTGGGCTCATGCAATCGGTGGCCGATGAGATTCAACTGAGCGAACAGCAATCgacaccgccgccaccaccaccgcccccaccaccaccaccgccgccgccaccaacAGCCCACGCCTCCAACACCACCTATGCGGTCTACAGCTACTACCGAGATGTCGATGTGGATGTCGATGTGGATGccgagcaacagcaacagcagcagcaacagcaacagcagcacaatgCTAGATCACAAcaagatcagcagcagcttctgtGGAGCAATGCGAGCAGCACCGGCAAACTGAATGGGCAGACCACACCTATCGATGTCTCTGGCCTAtcgcaaaatgaaattcaaggCTTTCTGCTTGGCTCACACCCCTCATCGTCGGCCGCCACAACCGGCGTTGTgtccacaacaacaatctcaaatcagcaacatcagcagcaacagcaacaacaacaacagcaacaacaacagcaacatcagcagcaacagcaacagcaacaacagcagcagcatcaacagcagcagcaacagcaacaacagcaacaacaacaaccaccacatCCCAGCGACATTGTAACCATAACCACGACGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCCgcagtgcaacagcagcaacagcagcagcagcagcagcagcagcaacaactgctgaGCATCAAACGTGAACCTGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGCGCCGCAGCAAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAACTGAAGCtgaggcaactgcaacttcaactgcaactgcaactgcaactgcaactgcattcGAAATTAGCGAtaaaacagctgctgcagcaacaacaacagcaacaacaagtgaaaCTGCAACTAGTCCCGCCAGCGCCACAACAGATCTAGAGATGTATGCTACAACGGGCGGCACACAGAATTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGTGGCGTACATCACAACGGATACCTATGGCATGTATGCGACCACAAGATTGCCGCCCGGCCCACCGCCCGCAACCACATTCATAGCGGAACCCTATTACCGCGAATATTTTGCGCCCGATGGCCAGGGTGGCTATGTGCCCGCCGGCACAGCGCGCAGCCTCTACGGCGAGGATGTATCCGTGGCGGCGGCCACACAACCACAGCCCGTGGGCGGTGTCTATGAGGCGCGATTCACCAGCAATGGGCCCACCACAACCACAGTGCTAACCAGCAGCAATGCACACCACCacagtcaacagcagcagcaacaacagcagcagcagcaacagcagcaacaacagcagcagcaggaacagtcGGGCAAAAGCGGCGGTACTCCACTATATGCCAAGGCTATAACGGCGGCGGGTCTGACCGTCGATTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATTACGCCGCGGGATCAAAATCACATACAGCagTCCTTCGACTATACGGAACTTTGTCAGCCAGGCACCTTAATTGATGCGAATGGCAGCATACCCGTCTCGGTGAACAGTATCCAGCAGCGCACTGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGACACAAGCACAAATGGCTCGACACGCTCGAGACCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGTTATAATTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGAGAGGACGATCGCATCACTTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCAGTTCAGTGCCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTTAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTTGAGGATCCGCGGGATGCGACAGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGgGCGCGGAGCGTAAGACGCGCGACGAGGAGCGTCGTGCCGCCAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTGGATGAGCTCTATCACCCGGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTCTTCTCGCCCGCCGAGGATATGGAAAAGAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCCTCGCCGTTCTTGCTGCACGGTCAGAAGGTGGCCACGCCCACGCTCAAATTTCACAATCATTTTCCGCCCGATATGCAGACTGACAAAAAGGATCATATATTGGATCAGAATATGTTAACCAGTACGCCCATGTCCGATTTTGGCCCACCAATGAAGCGGGGCAGAATGACGCCGCCGACAACGGAGCGTGTCATGTTATATGTGCGGCAGGAGAACGAGGAGATCTACACGCCGCTCCATGTGGTGCCCCCAACCACCATCGGCCTGCTAAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatatatCGCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATTTTCTTGCTGGAAGTGCAACAGATTGAGGATGATCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDATSSYAISYTDWIAESRRYTLEPAQQATPPPPPAPPQQQQHQQQHQQQQQQQQLHHQQQLHPHPHPHLQLQAHHLNHHQHHHQHYASQSPPHYSYVPPPKDASAQLQQHLPLTAAGLMQSVADEIQLSEQQSTPPPPPPPPPPPPPPPPTAHASNTTYAVYSYYRDVDVDVDVDAEQQQQQQQQQQQHNARSQQDQQQLLWSNASSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQQQQQQHQQQQQQQQQQQHQQQQQQQQQQQQQPPHPSDIVTITTTGVGSAGSIVSAAVQQQQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGSVITQKILRVDAARTEAEATATSTATATATATAFEISDKTAAAATTTATTSETATSPASATTDLEMYATTGGTQNYLQTSHQNSTGPSTQQSTLQAQSPSPVAYITTDTYGMYATTRLPPGPPPATTFIAEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEIYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00535075;
80% Identity
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