Dvar000133.1
Basic Information
- Insect
- Drosophila varians
- Gene Symbol
- elt-1
- Assembly
- GCA_018150405.1
- Location
- JAECWK010000129.1:2968250-2974986[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.23 5.7e+02 -0.0 0.0 16 24 116 123 112 124 0.89 2 3 0.87 2.2e+03 -1.9 1.4 1 16 400 412 399 425 0.61 3 3 5.8e-13 1.5e-09 37.1 9.5 1 28 451 477 451 478 0.98
Sequence Information
- Coding Sequence
- ATGGTCTGCAAAACTATTGCAACGAATGTGAAAATGCAGTTGAAGACCAGCCAGGCGGGAGTCAGCGAATCGGAGGAGCAGTACGTGGTGGTGCCACGCATGCAGAGACGCATCCTGACCACAGCGGGAACACTGGAGGTCAACGAATCCCGGGAAGGAGAGCTCACCAACGCTAGCAACGCCAGCTCCGGCTCCGCTACTGATAGCCACATCGAGTACCAGCGCTCCTCCCACCATTCCCCCGGAGGCGCCACCCATTACGTCCAGATGGCGCCACGCAACGCCGATGTGCCGGAGCAGGTGGCCGCTGCAGGAGCACCGCCGCCGGGCACCTTATACGCCTATCCCTCGGGGCAGATCCTGTGCAATGGCGAGGACGTGACGGCCATTAAGATCGAGACCATTGAGAAGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCGGCGGCCGCGGTCCACATTGCAACCAGCTCGCATGGCGGCGCCGTGCGATTCGTGACGGACGACGGACGCTTTGCCACCGCCGGACCAGAGACCTCCAGCTCCAGCCTCTACTACGATGCTCCGGTGGTGGACGGCAGCGTCCATGCCAACGAGTCCAAGACGTACGCGGACCTGGGCACCTACGCCCCCTTCCCGCCCAGCTCCAGCTTCACCAGCAACAGCTACGCGGCCACCCTGCCCCAGTCGAACACCATCTACAGTGTGCCGGCCAGCGGGCAGTTCCTGGCCAAGTCCGAGTCGGGCCTAAACTCGCTGCGCCAGGCGGGTCCGGCGGCCTTCCAGACGATAGCCTTCCCCGACGGCGGCAACACCATCGAGACCCTGTGGGCATCGTCCGCCCCCCCGGAGTACCAGAACGTCTCCTTTACCAATTTCCACCCACAGGTGATTGACGAGTACCCTGCCGGGAACATGACCGCCACCCACTGGACGCCCGCCGGCAACATTGGGCAGTACGATCCCAGTCTGGTGACGGGATCGGCCACCTCGTCGCCGAACCACGAGCTCAAGTGCGACAACTGCCACTCGCCGCTCATTCGCAAGGGAAGTGAATACTACTGTCACACCTGCACGAACTTCATGCGCCTGCCGTCGCGGATGCCCCAGAGGCAGGCCAAGCCAAAGGCGGCCGCCGCCCCCAACAATCGCCGCAATGGGGTGACCTGCGCCAACTGCCAGACCAACTCCACGACGCTCTGGAGGCGCAACAACGAGGGCAATCCCGTGTGCAACGCCTGCGGCCTAAGCGGAAGCGCAAGCCCAAAGAACAATGGAGGTGCCTCCATGCACGCGGGCGCTCGGGCCCCACTGCCAAGCATGGCGCAAGGAGTCAACCTGATGACAAACAGTACCCTGTATCCCTCCCAGGTGCCGGTGAGCATGCTGAGCAGCCAGCAGAACGCCAGTCCGGAGCTGCACGACATGTCGACGACGGGAGCGGCGGGCAGCCAGCGGGTGGTGGCCATCTCCCTCAACTCCGTGGCCCCGCCCACGACCGATGGAACGCTGAACATGTCCGCCCGTCACCATGTGACCGGCGAGAGCCACTCCCCATACAGCCAGCAGTCGACGCCGGCCCAGAGTCAGTCGCCCCATCTGCCCAGCACTGTGACAATAAACCGCCAGATAGTCCAGCCAGTTCCCGCCATCGAGAGCGGTCGCAGCGCCAATAGCGAGCTCACTCCCAGCGTAATCACCCGAACCGGACTCCCAGAGCGGTCATCGAATAACTAA
- Protein Sequence
- MVCKTIATNVKMQLKTSQAGVSESEEQYVVVPRMQRRILTTAGTLEVNESREGELTNASNASSGSATDSHIEYQRSSHHSPGGATHYVQMAPRNADVPEQVAAAGAPPPGTLYAYPSGQILCNGEDVTAIKIETIEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAAVHIATSSHGGAVRFVTDDGRFATAGPETSSSSLYYDAPVVDGSVHANESKTYADLGTYAPFPPSSSFTSNSYAATLPQSNTIYSVPASGQFLAKSESGLNSLRQAGPAAFQTIAFPDGGNTIETLWASSAPPEYQNVSFTNFHPQVIDEYPAGNMTATHWTPAGNIGQYDPSLVTGSATSSPNHELKCDNCHSPLIRKGSEYYCHTCTNFMRLPSRMPQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLSGSASPKNNGGASMHAGARAPLPSMAQGVNLMTNSTLYPSQVPVSMLSSQQNASPELHDMSTTGAAGSQRVVAISLNSVAPPTTDGTLNMSARHHVTGESHSPYSQQSTPAQSQSPHLPSTVTINRQIVQPVPAIESGRSANSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00504351;
- 90% Identity
- -
- 80% Identity
- -