Dvar000134.1
Basic Information
- Insect
- Drosophila varians
- Gene Symbol
- pnr
- Assembly
- GCA_018150405.1
- Location
- JAECWK010000129.1:2992722-2997705[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-18 1.1e-14 53.4 3.2 1 34 183 215 183 217 0.97 2 2 4.8e-19 1.2e-15 56.6 6.5 1 35 240 273 240 274 0.98
Sequence Information
- Coding Sequence
- ATGGGCATCTTACTGAGTGATGGCGATTCCACTTCGGATCAACAATCTACCCGTGACTATCCGCATTTTAGCGGCGGCCATCAGAACGGCCCATTGTCGGTAGCCAGCAGTGCCTCTGCCTGCGCCTCAGGACCCGCCTCTGCCGCATCTTCATCCGCCTCCGCCGCCTTCGCTGCTAAGATGTACCACACCAGCGCCGTGGCGGCGTATACGGACCTCGCTGCTGCCGGGAGTGCGGCCAGTGCCGGCGTGGGAGTCGGTGTGTCCGGCTACCATCACCAGCAGGCCGTGAACGCTCCGGTTTACGTGCCCTCCAACCGCCAGTACAACCACGTGGCTGCCCACTTTGGCAGCGCGGCAGCGGCCCAGAATGCCTGGACCACGGATAGCTTCGGTTCCGCACACGCCCAGCTACCGGCGCAGTTCTACACCCAGAATGCGGCCGTGATGATGAGCTCGTGGCGCAACCCCTACGATCCGACAGGCTTCCAGCGCTCCTCGCCCTACGAAAGCGCCATGGACTTCCAGTTTGGCGAGGGACGTGAGTGCGTCAATTGTGGAGCCATTTCCACGCCCCTGTGGCGGCGGGACGGCACCGGGCACTACCTGTGCAATGCCTGTGGGCTCTACCACAAGATGAACGGAATGAACCGGCCGCTGATCAAGCCCAGCAAGCGCCTGGTGAGTGCAACTGCAACCAGGAGGTTGGGATTGCGTTGCACGAATTGTGGCACCCACACTACCACCCTTTGGAGGCGCAACAACGACGGGGAGCCGGTGTGCAACGCCTGCGGACTGTACTACAAGTTGCACGGAGTGAACCGACCTCTGGCCATGCGGAAGGATGGCATCCAGACGAGGAAGCGGAAGCCCAAGAAGTCGGGAAGCGGCACGGCAACGGGAGCGACTTCGGGATCCCTGGAGACTATCAAGGAGTGCAAAGAAGAGCACGATCTCAAGCCCTCGCTTAGTCTGGAGCGGCACAGTCTGGGCAAGCTGCAGGCGGATCTGAAGAGCAGCAGTGCCACCACCAGCAGCCTCATGAGTCAACACCACGCTCCCCAGCAACAACAAGCCCAGCAGCAATCGCAACAGCAATCCCAACAACAGCAACAGCAGCAGACGGGACATCAGACATGCTTCCCCCATTACGGGCAAACGGCGACTCAGCAGCAGGCACAGCACCAGCAGCATGGGCATGGCATGACCACCTCAGCTGGGCAATCCCAGCTGAGTGCCCGGCAGCTCCACGGAGCAGCAGGATCACAGCTTTACACGCCTGGCAGTAGTTCCGGAGGAGGCAGTGCATCCGCCTACACTTCGCACAGTGCCGAGACTCCAACGCTAAGCAATGGCACCCCTTCACCCCACTACCAGCACCACCACCACCACCTGGGGGGATCGCATGGTCACCATGTGACGACGGCGGCCCATCATCATCTGCACGCAGCCGCAGCTGCCGCCGCTTATGGAGTGAAAACGGAGGCGAGTGGCACCAACTATGACTACGTGAACAACTGTTACTTTGGGGGATCCTTTGGGGCGCTCGGAAGCGCTGCATCCACGGCGGCCATGGCAGGAGGAGCGGCCAGCGAGCTGGCGGGTTACCATCACCAGCACAACGTCATCCAGGCGGCGAAACTGATGGCCACCTCTTAA
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPHFSGGHQNGPLSVASSASACASGPASAASSSASAAFAAKMYHTSAVAAYTDLAAAGSAASAGVGVGVSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAAQNAWTTDSFGSAHAQLPAQFYTQNAAVMMSSWRNPYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLRCTNCGTHTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKSGSGTATGATSGSLETIKECKEEHDLKPSLSLERHSLGKLQADLKSSSATTSSLMSQHHAPQQQQAQQQSQQQSQQQQQQQTGHQTCFPHYGQTATQQQAQHQQHGHGMTTSAGQSQLSARQLHGAAGSQLYTPGSSSGGGSASAYTSHSAETPTLSNGTPSPHYQHHHHHLGGSHGHHVTTAAHHHLHAAAAAAAYGVKTEASGTNYDYVNNCYFGGSFGALGSAASTAAMAGGAASELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00539319;
- 90% Identity
- iTF_00481890; iTF_00550605; iTF_00477687; iTF_00546315; iTF_00615251;
- 80% Identity
- -