Dvar000132.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila varians
Gene Symbol
srp
Assembly
GCA_018150405.1
Location
JAECWK010000129.1:2948104-2957214[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-17 5.6e-14 51.2 3.8 1 34 717 749 717 751 0.97
2 2 7.6e-20 1.9e-16 59.1 3.2 1 35 841 874 841 875 0.97

Sequence Information

Coding Sequence
ATGACCAAGACCAGCAAAGCGAAGGACAAGAGCGCCAGCGCGGGCGCAGCCAGTGGGGTGACGGGGGGGCCCAAAGTCGGGGGCAGCCTGCTGGCCAATGCGGCCGACATGAAGATCTTAAAGGCAAAGTCCAATGCCAAGTCGCAGCAGCAGCAAAAGCAGCTGCAAGGACGAAGTGCAGGATCGGCGGCGAAAGGGACGGCGATAGCGGCCGATCGCGGCGAAGCGATCGAGGCGACGCGGGCCGAGGCGGCGACGCCGACAGCGACGCAACTCCCGGCAGCAACGCCGACCGAGGCGAATTTATCGTCACTTGAGTCCGCGCGCTCGCAGGCTCACACTTCAATTCAATTCGAACCAGCGAGGCAAGCGGTTGCCGCACCCACGACACCAGCAACACCAACAGAAACGGCAGCAGCATCGGCGGCGATCAGCGACGATCGGAGTGCGATAAACAACAATAACAATAGTGACCAGGCGGCGGGCGACGCGAGTGAAAGTGTTGATAACAAAATCAAAGTGATAAACTATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGCGGGAACGGGGCCGGAAAAGTCCGATCTGTACGCCTTGGCCGCTTCGCACCACTTCTTCAGTCATTTGCCGTATCCACCAAGTCATCCGCCCACTCAGCTCTACGAGCACTACCAGACCATCACCGGCGCCAGCACGGATCCCATAATGCGGAACAACTTTGCTCTCTACAGCGTCTACGGAGGCGGTGGGGGGGGTGTGGGTGTGCCCAGCCATGAGCCCATCTCCCAGCATGTGGTGGCCGCTGCGGCGGCCGCGGCGGCAGCAGCAGCTCAGAACTCCACTCCCAACATCGACGAGGTCATCCAGGACACGCTCAAGGATGAGTGCTTCGACGATGGGCACAGTACGAGCTACCACATGCTGACCTCCGTGGCGGATCTGCACACGCTGAAGGACACCAGTCCGGTGGGCACCATCTACTCCCTAACCCACGAGCAGCTCCTCCACCAGCAGCAACAGCAGCAGCAACTCCACCACCAGCAACACCAGCAGCACCAGCACCAGCAGGTGTATCACCAGCAACATCACCACAACACCTCGACCAGCTCGGCTGGCGGGGATTCGCCGTCATCGGCGCACGCACTGCAGAGCTTCACCCAGCTGACCAGCGCCGCCCACAGGGACAGCCTCTCGCCGGCGGAGCACGGTTACTTTGGAGCCACCCAGCTCAGTCCCAGCTTGCAGACCAGCTCCGTCTACGCTGGTCCTTTGCTAACCACCAATGGCATGCAGTACGGCATGCAGTCGCCCAACCATACCCAGGCCCACCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGTCAATGGACACAACAGCTCCCTGCTGGAGGATGGCTACGGATCGCCAAGGAGCAGCCACAGCGGGGGCGGAGGTAGTGGGGCAGGCGGTGGCGGCGGCACCCTGCCCGCCTTCCAGAGATTCGCATCCGCCAGCAGCGGCTACGGCAGCGGCGTGGCCAATGGCTCGGTCAGTGGCGCCGAACGCAGCTGCTACGCTTCGGTGCCCCATTTGCGCGGTCAGAACGAGCCCTGGGGCTATGACCAAATCAGTTACGCCTCCGCAACCCCTGGCCAGCAGTTGGGAGTCCCCGGTGGAGCCGGAGTGATACGGAACGGCAGGGCCATCACGGCAGCCAACGCAGCCGCAGCAGCAGCCGCCGATGGGTCGGCGGGACGCGTGGATCCTGGATTCCTCTCCGCCTCGGCATCGCTGTCAGCCACATTTATCGATGCCGATATTTTCACTGAGGGGCGAGAATGTGTCAATTGTGGTGCAATTACGACCCCACTCTGGCGACGAGATAACACGGGACACTATCTGTGCAATGCCTGCGGCTTGTACATGAAAATGAATGGCATGAATCGACCCCTAATTAAACAGCCTAGAAGATTGAACTACTCATTTAATGTGGCCGGCGGTGGTCGTAGTAAGGCCAACACCAGTGCCGCCAGTTCGCAGGCCAGCTTGTCTGGATCCTGTCCAGCTTCGGGTGTTACGTCGACGTCGACGACGGCAGCGGCGGTGGCGGCGGCGACGGCGGCAACGTCGGGAGCGACGTCAACGCTCGACGAGCACGTTAGTCGCGCCAATTCGCGACGCATGAGCGCTCAAAAGCGAGCTGGATTGTCGTGCTCCAACTGCCACACCACCTACACGTCCCTGTGGCGCCGCAATCCCTCCGGAGAGCCAGTCTGCAATGCCTGCGGCCTGTACTTTAAGCTGCACAACGTTCCCAGGCCATTGACAATGAAAAAAGATACCATACAGAAACGAAAACGCAAACCCAAAGGCACCAAGAGCGAGAAGCCCAAAAAGCTCAAGACCGCCTTGAGGAGCACCTTGGACAGCGGCTCCCTGTCCTCCAATTGCCAATTGGTTGGCCATTTGAACAGCAGCCAAATGGGAGTCGATGGCAACGATGAAATGAAACCATACATGCCATACACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCCATGGCCGACCAGCACTCATCGGCTGCCAGTTCGCCCCATAGCATGGCATCCTCATTATCGCCCTCAGCCACATCGTCACACCACCAAAATCCCCATCAACAGCTCTGCTCCGGCTTGGACATGTCACCCAATTCGCCCTACCAAATGTCCCCCATCAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCGGCACACCCACATCCATCTATAACACACCATCACCCACCCAACACCTTCACAATAACAACAACAATAATAGCTCACTATTCAACAACAACAACAACAACAACAATAGTAGTAGCAATGAGAATAACAACAAATTTATACAGAAATATCTGCAAGCTCAGCAGAACGGGAGCGGGAGCGGGAACGGGAGCGAGCAACAGCTCCTGGCCCACCTGATGCCGAGCTCGATTACGGCGGCAGCAGCAGCTGCGGCAGCGGCGGCAGCGCTCAACACAATCAAGTCGGAGGCCTCGGCGGTGTCCTCCACACCGCTGGCGACCTCAACACCGACCACGGCATCAACCCCATTATCCTCGCTGACCCACAACACCACCAGCAACAGCAACAACAGCAGCAGCAGCCACATTATCAATCTGCAAAATCCATATCAACAGTTGGTACAGCTTGGACAGACGGGGACGCCGTTGTTTAAGTCCGGACTATCCACACCGCCCTACTATATCTCCCCGGAGGGGGACGACCCGGCGACGCAAATCAAGGTGGAGCAGATGGATCAACAGCAGCCTGGACAGGGACATGGGGAACTGATGTTGGGCCGGTCAGCCTCGTTGGACGAGCACTACGAACTGGCCGCCTACCAGCGGCAACAACACCAAACGAGTCTCCAGCAGCAGCAGGAGCAGATTGCCAACTATGCCATGCAGTTGCACGAAATCGAACGCAAATTCGCCGGCGCCGAGCGGGATGCGGTGGTGAAGATGGAGTAA
Protein Sequence
MTKTSKAKDKSASAGAASGVTGGPKVGGSLLANAADMKILKAKSNAKSQQQQKQLQGRSAGSAAKGTAIAADRGEAIEATRAEAATPTATQLPAATPTEANLSSLESARSQAHTSIQFEPARQAVAAPTTPATPTETAAASAAISDDRSAINNNNNSDQAAGDASESVDNKIKVINYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTGPEKSDLYALAASHHFFSHLPYPPSHPPTQLYEHYQTITGASTDPIMRNNFALYSVYGGGGGGVGVPSHEPISQHVVAAAAAAAAAAAQNSTPNIDEVIQDTLKDECFDDGHSTSYHMLTSVADLHTLKDTSPVGTIYSLTHEQLLHQQQQQQQLHHQQHQQHQHQQVYHQQHHHNTSTSSAGGDSPSSAHALQSFTQLTSAAHRDSLSPAEHGYFGATQLSPSLQTSSVYAGPLLTTNGMQYGMQSPNHTQAHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNGHNSSLLEDGYGSPRSSHSGGGGSGAGGGGGTLPAFQRFASASSGYGSGVANGSVSGAERSCYASVPHLRGQNEPWGYDQISYASATPGQQLGVPGGAGVIRNGRAITAANAAAAAAADGSAGRVDPGFLSASASLSATFIDADIFTEGRECVNCGAITTPLWRRDNTGHYLCNACGLYMKMNGMNRPLIKQPRRLNYSFNVAGGGRSKANTSAASSQASLSGSCPASGVTSTSTTAAAVAAATAATSGATSTLDEHVSRANSRRMSAQKRAGLSCSNCHTTYTSLWRRNPSGEPVCNACGLYFKLHNVPRPLTMKKDTIQKRKRKPKGTKSEKPKKLKTALRSTLDSGSLSSNCQLVGHLNSSQMGVDGNDEMKPYMPYTXXXXXXXXXXXXXXXXXXXXXSMADQHSSAASSPHSMASSLSPSATSSHHQNPHQQLCSGLDMSPNSPYQMSPINXXXXXXXXXXXXXXXXPGTPTSIYNTPSPTQHLHNNNNNNSSLFNNNNNNNNSSSNENNNKFIQKYLQAQQNGSGSGNGSEQQLLAHLMPSSITAAAAAAAAAAALNTIKSEASAVSSTPLATSTPTTASTPLSSLTHNTTSNSNNSSSSHIINLQNPYQQLVQLGQTGTPLFKSGLSTPPYYISPEGDDPATQIKVEQMDQQQPGQGHGELMLGRSASLDEHYELAAYQRQQHQTSLQQQQEQIANYAMQLHEIERKFAGAERDAVVKME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-