Dvar010265.1
Basic Information
- Insect
- Drosophila varians
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018150405.1
- Location
- JAECWK010000015.1:20780219-20792185[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-05 0.091 12.3 0.0 1 31 302 332 302 340 0.93 2 2 6.9e-19 1.3e-15 56.6 0.0 1 43 735 778 735 780 0.95
Sequence Information
- Coding Sequence
- ATGGGGACCGGGAACCCAAACCCAAACCAGAACTGCCTAGAACGCGTTGCTGAGGAATTAATGGGTCGCAGGCAATGGAAACACTACCAAGAGCAGCATTTGAATATCGACGAGCAACAGCCCAGAGTAATAGCCGGTTCCGAGGACGAGCCACCGCAATACAACAACCACAAGAGCAACAACCACAGTAAACCAGAAAACCACCGTCTAGAGCAGATCGAACCCAACGGCAGTCTGCTACCAGAAGAAGATTTCGAGAACAACCAAACATCACAGGACTCATCACGTACACCAACGCCGGGAACCACAAGTACACCATCACCACCGCCACAACCCATCGATTGGAGACCGCAGGACAAGTGCAATTTTTGTGTCAACGGTCGCCTGTTAACGGTGAACGCCAAGGGCGAACTGGTGGCCGAAACAGCGGCAGCTGCAGCAGCGGCCAATACAGTTAGTTTTAGCCACATTCATCAGCACGACAGTGACACCGACTGCCACCTTGTTGGGGCAGCAACGGGCGCGGAGAAAGCGGCAGCAAACTCGCTAGAATTGTACAAGCTGCTCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCAGTCCCGCACTCAAAGATACGCCCAGTCCCAGTGCAGATGCTCCGCTCGATCTTAGCAGCAAGCCCTCGCCCAACTCATCGATTAGCGGCGACGTGAAGTCCATCAGAGCCTGTGCCACGCCCACGTCGAGCGGCAGAAGGGCGTACAGCGAGGAGGACCTGAACCGAGCGCTGCAGGACGTGGTGGCCAACAACCTGGGCAGCCGCAAGGCGACCAACCAACACCACGTGCCGCGCTCCATAGTGGTCGACCGGCTGCTCAAGATCCAGCAGGATCTGGACCAATCGGACCCAGACCAGGACGCGGGCGACTCCAACGACGAGGGCGAGGCGGACGGGGACAGCAATGCCTCCACACCAGCTCCGGGCTATCCGCCAGACTATAACCAGCTGAGGAAGTTTTCCGAGCACAATGGCAGCGACATGGGCGACGAGCTGGATCCACGGGGTTCGCCCAAAATGGGCCGATTGCCAGGCAACAGCAGTGTTTCCTCCGGAGGGGGAGGGGCCGGCGCAGGAGGCGGGGCAGGACTGCCTGCCATGCCACCCATCGATGCCAATGTCCTGCTGCACACACTGGTCCTGGCCGCCGGGATCGGAGCCATGCCCAAGCTGGACGAGAAGCAGACGGTCGGCGATGTGATCAAGAACCTGGTGATGGCCAACAGCGGCGGAGCCGGGACGATCATGAACGAGGCCCTGCTAAATCTTCTGGCGGCCAATCAGGAGAGCAACGGAAGTGGCTCCTTGCTGCTCCAGCAACAACAACAGCAACACCAGCAGCAGCAGCACGTGGCCGCCGCCATCCGACACCGCCTGCCCAAATCGGAAACGCCGGAGACCAACTCCTCGCTGGACGCCAACGAGGCCAACGAGGATCCCATCCTAAAGATTCCGTCCTTCAAGGTCAGCGGGCCGGGCCTGTCGCCGCTGAACAACAACAACAACAGCATCGGCAGCAACAACAACATCAGCAACAACAACCGGAATGGAAGCAACCGCAGCCCCCTCTCCGCGTCGCCCATGCTGGCCGCCGCAGAGGCCCAGGGATCGGGTGGGGTTGGGCCAGGCTACGGACTGGCCAGCTCCTCCTCAAGCATTCAGAAAATGATGGCCAGCAACATCCAGCGCCAGATCAACGAGCAGAACCGGGTCCAGGAGCAGGAGTCCCTGCGCAACGGCAACTCTTCCGACTGCAGCTCCAACAACGGCAGCTCCACGAGCGGCTACAAGAAGCCCAGCATATCGGTGGCCAAGATAATCGGCGGCACGGACACCTCCCGCTTCGGTGCCTCGCCCAACCTGCTCTCCCAGGTGCACCACCACCACGCGAGCGGCGGCCACCACCTGAGCCACCACCAGCAGCAGCAGCTGAGTGCCCAGGACGCAGCCGCTCTGGCAGCGGGCAAGGGAACCCGACCCAAACGGGGCAAGTACCGCAACTACGACCGCGACAGCCTGGTGGAGGCGGTCAAGGCGGTGCAGCGAGGCGAGATGTCCGTGCACCGGGCGGGCAGTTACTACGGTGTGCCCCACTCCACGCTGGAGTACAAAGTAAAGGAGCGGCACTTGATGCGACCACGGAAGCGGGAACCCAAGCCACAGCCGGACCTGGTGGGCTTGACGGGGCCGGCCAACAAGCTGCACCTGGACAAGCTGAAGCCTGGCAACTCCAAGCTGAGCAACGCCCTCAAGAGCAGCAACCAGGCGGCAGCAGCGGCGGCAGCAGCCGCGGCTGCAACGCCCAACGGCCTCAAGCTGCCGGGGATCTTTGAGGGCGCCGCCTCGCAGCTGCCCTTTCAGTCGAACATGTTCTGGCAGCCGAACGCCACGAGTCCCTACGGCCTGGACTTCACCCGGATGGCGGAGGCCATGCGGAATCCGCAGCAAAATGGACCGATGAAGAGCGCGTTGGAGATGACGGAGAACATGTACGACGGCATCATTCGGAGGACCCTGCAGTCCAGCGAGGCGGGGGCGGCGGGTGCCAACGGTAGCTCCGTGGCCGGCAATGGGAGCAGCAATGGCCACGCCCTGCTGGACCAGCTGCTGGTGAAGAAGACGCCCTTGCCGTTCACCAACCACCGGAGCAACGACTACGCCGCCACCTGTTCCAGCGCCAGCGGGGAAAGCGTCAAGCGATCGGGTAGTCCTCTCGGGGGGTCGGGCGACTATCCGGACATCAAGCGGGAGCGGCTGAGCGCCGACAGCGGCGGTAGCAGCGACGAGGAGCACATCAACCTGAACAACAACAGCGACCTGGCGCACAACAAGAACAAGGGCTCCAACGGCAACGGCAACGGCACCGGAAACGGAAATGGCCAGGCCAATTCAAATGGTAATGGCCGGAGCAGCCGGATGACCTCGAGGGACTCGGAAACGGACGTCTCGAGCCTGAAGAGCGAGCAGAGCAGCCACAAACTCATGGATCTCAATGGCGGCAACAGTCACATCAAGTGCGAAGCGGAAATGGAGAGTGGCGCCTCCGCCTCCTCTTCCATTCTGCACGAGAAGCTGGCCCAGATCAAGGCCGAGCAGGATCATTTATAG
- Protein Sequence
- MGTGNPNPNQNCLERVAEELMGRRQWKHYQEQHLNIDEQQPRVIAGSEDEPPQYNNHKSNNHSKPENHRLEQIEPNGSLLPEEDFENNQTSQDSSRTPTPGTTSTPSPPPQPIDWRPQDKCNFCVNGRLLTVNAKGELVAETAAAAAAANTVSFSHIHQHDSDTDCHLVGAATGAEKAAANSLELYKLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISPALKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRACATPTSSGRRAYSEEDLNRALQDVVANNLGSRKATNQHHVPRSIVVDRLLKIQQDLDQSDPDQDAGDSNDEGEADGDSNASTPAPGYPPDYNQLRKFSEHNGSDMGDELDPRGSPKMGRLPGNSSVSSGGGGAGAGGGAGLPAMPPIDANVLLHTLVLAAGIGAMPKLDEKQTVGDVIKNLVMANSGGAGTIMNEALLNLLAANQESNGSGSLLLQQQQQQHQQQQHVAAAIRHRLPKSETPETNSSLDANEANEDPILKIPSFKVSGPGLSPLNNNNNSIGSNNNISNNNRNGSNRSPLSASPMLAAAEAQGSGGVGPGYGLASSSSSIQKMMASNIQRQINEQNRVQEQESLRNGNSSDCSSNNGSSTSGYKKPSISVAKIIGGTDTSRFGASPNLLSQVHHHHASGGHHLSHHQQQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKLHLDKLKPGNSKLSNALKSSNQAAAAAAAAAAATPNGLKLPGIFEGAASQLPFQSNMFWQPNATSPYGLDFTRMAEAMRNPQQNGPMKSALEMTENMYDGIIRRTLQSSEAGAAGANGSSVAGNGSSNGHALLDQLLVKKTPLPFTNHRSNDYAATCSSASGESVKRSGSPLGGSGDYPDIKRERLSADSGGSSDEEHINLNNNSDLAHNKNKGSNGNGNGTGNGNGQANSNGNGRSSRMTSRDSETDVSSLKSEQSSHKLMDLNGGNSHIKCEAEMESGASASSSILHEKLAQIKAEQDHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00503912;
- 90% Identity
- -
- 80% Identity
- -