Dvar010680.1
Basic Information
- Insect
- Drosophila varians
- Gene Symbol
- ct
- Assembly
- GCA_018150405.1
- Location
- JAECWK010000126.1:611373-625857[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.1e-27 3.9e-23 81.0 0.0 3 72 574 644 572 649 0.95 2 3 5.1e-32 3.9e-28 97.1 0.0 3 77 1014 1089 1012 1091 0.96 3 3 3.1e-31 2.4e-27 94.5 0.0 3 76 1310 1384 1308 1387 0.96
Sequence Information
- Coding Sequence
- ATGGGCAATAAGATTAAGGCCCTGCTGGATGAACTGCAGCGCCTGAGGGCTCTGGAGCAGACCCACCTCGTCCAGATCCAGCGCCTGGAGGGCCACCTGGAGGTCAAGCGGCAGCACATCATCCGACTGGAGGCGCGCCTGGACAAGCAGCAGATCAACGAGGCCCTGGCCGAGGCCACCGCCCTGGCCGCCGTTGCCGCCACTAACAACAACAACAACAATAACAATAACAACATTAGCCAGAGCAACGACAACAACACCAAGCTGCCCACATCTGCCTCTGCCTCTGCCTCCACCACCGCCACCGCCACCGCCTCGGCCTCCGTGGAACTGACCGCCTCCGACGCTGTGATCGAGGACGAGGAGGAGGAGCAGGACCACGACCAGGCCATGCTGGTGGATGGCGAGCCGGAGGAGCCGGAGGACGCCGAAGAGAAGGCGAAGGAGCAGGAGGAGGAGGAGGAGCTGGAGGAGGAGGAGTTGGACGAGGCAGCAGCCGGCCCAGCCCCCACCGCCTCAGCCTCCGCCGCCGATGGCAACAACGAGCTCAAAATCAAAAAGGAACAGCACAGTCCGCTGGATCTGAACGTGCTGAGTCCCCAGTCGACGATCGCCGCCGCCGCTGCGGCCGCCGCTGCCGCCGCCTGCGCCAACGATCCCAACAAATTCCAGGCCCTGCTCATGGAGCGGACCAAGGCCCTGGCCGCCGAGGCGCTCAAGAACGGCAGCACCGGAGACGCCGCCAACGAAGAGGTCCGAACGAAAGCGAAAACGGAAACGGAAGTGCTGGCCAAGCAGGAAGTGGCCGTGGCCGTGGCCGTGGCCGACGACCAGGAGCCCCAAAGCTATTGGCGTCGCGGCTTCGACGCGGACAGGTCGGAACGGTCCGGGAGCAAAACGCCAACAATCTATCAAAATTTTGCGTCAATCGAGCCGGGCCGGCTGCTGCCGCCGCCTCCCCCGCCTCCTCCGCCGCCACCTCAGCCGCAGCCGCCTTCCATGCCCCCCAGCCAGCATTTTGGCAACCCGACTGCCCCACCACTTTACCCCCAGCAGCCACAACAGCAACAACAACAGCAACAGCAACAGCAACATGGACCCTCGTCCACCGCCCTGCTAAGCCAACTGGTTAACTCCACATTTTCCAACTCCAATCCCTCTTCTTCCTCCACCCGCCTAGATGGTAGCCTCTCCTCGCAGCAGCACCAGCACCAGCAGCAGCACCACCACCCGAGCGCCAGCCAGCCCAATCCCGCGGAGAACCAGCACCACCACCATCACCACCTGCACATGCTACACCCGTCGGCGGCCCATCACCTGCAGCAGCAGCAGCACCACCACCACCACCAGGACGGCAGCACGAGCTCGAGTGCCACCAGCACCCCCGCCGCCAACGGCGCCAAGACGCTGCTCCAGGACTCGGAATCGGCCGCCGCCGCCGCCAACGGACTTGCTGCCGCCGCCATGGCCGCCCATGCCCAGCACGCCCTCGGCCCGGCCGGATTCCTGCCAGGCCTGTCGCCGGCCTTCCAGTTCGCCGCCGCGGCCGCAGCTGGCCAGGATGCCCGCGGCCACTACCGGTTCGCCGATGCCGAGCTGCAACTGCCGCCGGGCGCCTCGATGGCTGGCCGCCTGGGCGAGTCCCTTATCCCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAGATGCTCCGCTATAACATGGACAAGTACGCCAACCAGGCGCTGGACACGCTTCACATATCGCGCCGCGTCCGCGAACTCCTCTCCGTGCACAACATCGGCCAGCGGCTCTTCGCCAAGTACATCCTGGGCCTCTCCCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCCAAGCCCTGGGACAAGCTGACTGAGAAGGGGCGCGACAGCTACCGGAAGATGCACGCCTGGGCCTGCGACGACAACGCCGTCATGCTCTTGAAGTCGCTGATACCGAAGAAAGACTCTGGCCTGCCCCAGTACGCCGGCCGAGGCCCCGGCGGCGGTGGCGATGACTCCATGTCCGAGGACCGCATCGCCCACATCCTGAGCGAGGCCTCCTCGCTGATGAAGCAGTCGAACGCCGCCCAGCAGCAGCGCGACCATAACCGGGAGGACTCGCACAGCAACGAGGACAGCAAGTCGCCCCTCCAGAGCTGCACCTCCCCCTTCTTTAAGGTGGAGCAGCAGTTGAAACAGCAGCACCTCACCCCCGATCAGGCCCAGCAGCAGCGCGAGCGGGAACGGGAGAGGGAGCGGGAGCGGGAGCAGCAGCAGCGGCTGCGACACGAGGATCTCGCCCAGGACAAGATGGCCAGGCTCTACCAGGAGCTAATCGCCCGCACTCCCCGCGAGACGGGCTTCCCCGGCTTCCTACTGTCGCCGTTCTTTGGGGGAGCAGCCGGCATGCCAGGAGCAGCCGCCAACACCTTCCCCGCCGCCATGGCCGCCGACGAGAACATGCGCCACGCCTTCGAGCGGGAGATCGCCAAGCTCCAGCAGGCCCAGCAGCAGCAGCAGCAGCAGTTCCCCAACTTCTCCAGTTTGATGGCCCTGCAGCAGCAGGTGCTGAACGGTGCCCAGGACCTCTCGCTAGCCGCCAAGGACATCAAGCTGAACGGCCAGCGGTCCTCGCTGGAGCACAGCGCCGGCAGCAGCAGCTGCTCTAAGGACGGCGAGCGCGAGGACAACTACGCCGGGTCCCTGCACGGCCTCCAGTCGGAGGGAGGCGGCACTCCAGCCCCGGTCTCTTCGGGCCAACCGCCCCTGGCAGCCACAGCCGGACCAGGAGTCGCCGGAGCCTCTGGCACCACCAGCAACTCAGCGGCGCCCAGTCCACTGAGCAACTCCATCCTGCCGCCGGCCCTGAGCAGCCAGGGCGAGGAGTTCGCCGCCACGGCGAGTCCCCTCCAGCGGATGGCCTCGATCACCAATTCGCTGATCACGCAGCCGCCGGTGACACCCCACCACAGTACCCCGCAGAGGCCGACCAAGGCGGTCCTGCCGCCCATCACCCAGCAGCAGTTCGACATGTTCAACAACCTGAACACCGAGGACATCGTGCGGCGCGTCAAGGAGGCACTCTCGCAGTACTCGATATCGCAGCGGCTCTTCGGCGAGTCGGTGCTGGGGCTCTCGCAGGGATCCGTCTCGGACCTGCTGGCCCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGGCGCGAGCCCTTCATCCGCATGAAGATGTTCCTGGAGGACGAGAATGCGGTACACAAGCTGGTGGCCAGCCAGTACAAGATCGCCCCCGAGAAGCTGATGCGCACAGGCAGCTACAGCGGCAGCCCCCAGATGCCACAGGGATTCGCCTCCAAGATGCAGGCCGCCTCCCTGCCAATGCAGAAGATGATGAACGAGCTGAAGCTGAAGCCGGAGGGCCAGCAGCACCTCATGCAGCAGATGCAGGCGGCGGCCATGTCGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGGCGGCAGCCTTGCACCACCAGAGCATGCTCCTGACCTCGCCGGGCCTGCCGCCCCAGCACGCCATCAGCCTGCCGCCAGGCGGAGGAGGGGGCAATGCCAGTGGCGGTGGAGCCGGTTCGGGAGGAGCTCCTGGTGTAGGAGCTGCCAACACGAACAACGTCAGTCCCGCCGGGGGCGGAAACAGCGCCGAGAAGAAACCCATGCTGATGCCCGTCCATGGTGCGAACGCCATGCGAAGCCTCCACCAGCACATGTCGCCCACCGTCTACGAAATGGCCGCCCTCACCCAGGACCTGGACACCCACGACATCACCACCAAAATCAAGGAGGCTCTCCTCGCCAACAACATCGGCCAGAAGATATTCGGCGAGGCGGTCTTGGGCCTCTCGCAGGGCTCCGTCTCCGAGTTGCTCAGCAAGCCAAAGCCTTGGCACATGCTCTCCATCAAGGGCCGGGAGCCCTTCATTCGGATGCAGCTCTGGCTGAGCGACGCCAACAACGTGGAGCGACTGCAGCTGCTGAAGAACGAGCGGCGCGAGGCGTCTAAGCGGCGCAGGAGCACCGGTCCAAACCAGCAGGACAACAGCAGCGACACCTCCAGCAACGACACCAACGACTTCTACACCAGCAGCCCGGGCCCCGGCTCCGTGGGTAGCGGTGTTGGCGGAGCCCCGCCCAGCAAGAAGCAGAGGGTCCTGTTCTCCGAAGAGCAGAAGGAGGCTCTGCGTCTGGCCTTCGCCCTCGACCCCTATCCCAACGTGGGCACCATCGAGTTCCTGGCTAACGAGCTCGGCCTGGCCACCAGGACCATCACCAACTGGTTCCACAACCACCGCATGCGCTTGAAGCAGCAGGTGCCGCACGGCCAGCCTGGCCAGGACAACCCCATTCCGAGCCGGGAGAGCACCAGCGCCACGCCCTTCGATCCCGTCCAGTTTCGCATCCTGCTGCAGCAGCGCCTCGTCGAGCTGCACAAGGAGCGCATGGGTCTGAGCGGCGCCCCCATCCCATATCCGCCGTACTTCGCCGCAGCCGCCCTGCTGGGCCGCAGCCTGGGACTTCCCGGTGCGGCAGCAGCTGCCGGAGCAGCGGCGGCAGCAGCGGCCGTGGGTGCGGCCGGCTCCGGCGGCGCCGATGAGCTGCAGGCCCTCAACCAGGCCTTTAAGGAGCAGATGAGTGGCCTGGACCTGTCCATGCCCAGCCTGAAGCGTGAGCGGAGTGCCGACTACCAGGACGACATGGAGCACAACCTGAGCGACAACGAGAGCCTGGAGGGGTCCGGCGGCCAGGACGGAGATCTGGACAAGGCCGGACAAGGCACCACCGACTACGAGAAGGTCCTCCACAAGTCCGCCTTGGCCTCGGCTGCCGCAGCCGCCGCTTACATGTCCAATGCGGTTCGCAGCTCCCGCCGCAAGCCGGCGGCCCCTCAGTGGGTGAATCCGGCCGGCGCAGGAGGTCCTGCCGTCGCGAATCCTGTCGTTGCCGCCGCCGTAGCAGCAGCCGCGGCAGCAGCAGCGGCCGCCGAGGGCGAGCGGATCATCAACGGCGTGTGCGTGATGCAGCCCTCGGAGTACGGAGTCCGGGGCGAGGAGAACGAGGGCAAGGGCGGTGAAGAGTCGTCCCTGGGGGGCGGCGATGCCGAGCTGGAGATCGACCAGCGCTTCATGGAGCCGGAGGTGAGCATCAAGCAGGAGGAGGACGACGACGAGGAAGAGGAGGAGCACGCCCAGGCGCACCACGTCTCGGAGGGCGCCGTCGAGGAGGGCTCTCTGGAGCAGAAGCTCAAGGTGGTCAACGAGGAGAAGCTGCGCCTGGTGCGGGTGCGCCGCCTAAGCAGCAACGCCGAGGAGTCAGCCGGCGTGGGAGAGTCTGTCTCCAACCCCGCCGCCCTATCGCCTTCCGCCGGGAACGGAAACGGCGGAAGCGGAAACGGAAGTGGAAGCGGAGCCGGAGCTTCCTGGAACTACTAG
- Protein Sequence
- MGNKIKALLDELQRLRALEQTHLVQIQRLEGHLEVKRQHIIRLEARLDKQQINEALAEATALAAVAATNNNNNNNNNNISQSNDNNTKLPTSASASASTTATATASASVELTASDAVIEDEEEEQDHDQAMLVDGEPEEPEDAEEKAKEQEEEEELEEEELDEAAAGPAPTASASAADGNNELKIKKEQHSPLDLNVLSPQSTIAAAAAAAAAAACANDPNKFQALLMERTKALAAEALKNGSTGDAANEEVRTKAKTETEVLAKQEVAVAVAVADDQEPQSYWRRGFDADRSERSGSKTPTIYQNFASIEPGRLLPPPPPPPPPPPQPQPPSMPPSQHFGNPTAPPLYPQQPQQQQQQQQQQQHGPSSTALLSQLVNSTFSNSNPSSSSTRLDGSLSSQQHQHQQQHHHPSASQPNPAENQHHHHHHLHMLHPSAAHHLQQQQHHHHHQDGSTSSSATSTPAANGAKTLLQDSESAAAAANGLAAAAMAAHAQHALGPAGFLPGLSPAFQFAAAAAAGQDARGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGPGGGGDDSMSEDRIAHILSEASSLMKQSNAAQQQRDHNREDSHSNEDSKSPLQSCTSPFFKVEQQLKQQHLTPDQAQQQREREREREREREQQQRLRHEDLAQDKMARLYQELIARTPRETGFPGFLLSPFFGGAAGMPGAAANTFPAAMAADENMRHAFEREIAKLQQAQQQQQQQFPNFSSLMALQQQVLNGAQDLSLAAKDIKLNGQRSSLEHSAGSSSCSKDGEREDNYAGSLHGLQSEGGGTPAPVSSGQPPLAATAGPGVAGASGTTSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGFASKMQAASLPMQKMMNELKLKPEGQQHLMQQMQAAAMSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAALHHQSMLLTSPGLPPQHAISLPPGGGGGNASGGGAGSGGAPGVGAANTNNVSPAGGGNSAEKKPMLMPVHGANAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSGVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRESTSATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLGLPGAAAAAGAAAAAAAVGAAGSGGADELQALNQAFKEQMSGLDLSMPSLKRERSADYQDDMEHNLSDNESLEGSGGQDGDLDKAGQGTTDYEKVLHKSALASAAAAAAYMSNAVRSSRRKPAAPQWVNPAGAGGPAVANPVVAAAVAAAAAAAAAAEGERIINGVCVMQPSEYGVRGEENEGKGGEESSLGGGDAELEIDQRFMEPEVSIKQEEDDDEEEEEHAQAHHVSEGAVEEGSLEQKLKVVNEEKLRLVRVRRLSSNAEESAGVGESVSNPAALSPSAGNGNGGSGNGSGSGAGASWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00481449;
- 90% Identity
- iTF_00615464;
- 80% Identity
- iTF_00615464;