Dvar001893.1
Basic Information
- Insect
- Drosophila varians
- Gene Symbol
- kn
- Assembly
- GCA_018150405.1
- Location
- JAECWK010000130.1:11618019-11629040[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-91 6.5e-87 291.9 0.0 39 182 57 200 32 200 0.96
Sequence Information
- Coding Sequence
- ATGGACTGGGGCCGGAAGCTCTATCCGAGCGCCGTCTCCGGCCCGCGATCCGCCGGAGGTCTGATGTTTGGCCTTCCGCCCAGCGCCGCCGACATGAACCAGCCCCGGGGCCCGATGACCTCCCTCAAGGAGGAGCCCCTGGGCAGCCGATGGGCCATGCAGCCCGTCGTCGATCAGACCAATTTGGGCATTGGCCGCGCCCACTTTGAAAAACAGCCGCCCAGCAATTTGCGGAAGTCGAATTTCTTTCACTTTGTGATCGCCCTCTACGATCGAGCTGGCCAGCCCATTGAGATCGAAAGGACGGCCTTCATTGGCTTCATCGAAAAGGACTCGGAGTCGGATGCCACCAAGACCAACAATGGCATTCAGTATCGACTGCAATTGCTCTATGCCAATGGCGCGCGCCAGGAACAGGACATTTTCGTGCGTCTCATCGATTCCGTGTCCAAGCAGGCCATCATATATGAGGGTCAGGACAAAAATCCCGAAATGTGCCGAGTCCTGTTAACGCACGAGGTCATGTGCAGCCGCTGCTGTGATAAAAAGAGCTGTGGTAACCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGGTAA
- Protein Sequence
- MDWGRKLYPSAVSGPRSAGGLMFGLPPSAADMNQPRGPMTSLKEEPLGSRWAMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVSKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00581319;
- 90% Identity
- iTF_00581319;
- 80% Identity
- -