Dvar001892.1
Basic Information
- Insect
- Drosophila varians
- Gene Symbol
- kn
- Assembly
- GCA_018150405.1
- Location
- JAECWK010000130.1:11606629-11611876[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-139 4.4e-135 451.0 0.0 182 384 4 235 1 239 0.98 2 2 1.2e-07 0.00091 17.4 15.6 422 519 240 337 235 355 0.63
Sequence Information
- Coding Sequence
- ATGGCGCGAAACTTCTTCCTCAAGTTCTTCTTGAAGTGCAATCAAAATTGTCTGAAGAATGCCGGCAACCCGCGGGACATGCGCAGATTCCAGGTGGTCATCTCCACACAAGTGGCCGTCGATGGCCCACTTCTGGCCATCTCCGACAACATGTTTGTGCACAATAACTCGAAGCACGGACGAAGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGATTGTATCCGCCTCTGCCAGTGGCTACGCCCTGCATCAAGGCCATCTCGCCCAGTGAGGGCTGGACCACCGGCGGCGCCACGGTGATCATTGTGGGGGACAACTTCTTCGATGGCCTGCAGGTCGTCTTCGGCACCATGCTGGTCTGGAGCGAGCTGATCACCTCGCATGCGATCCGGGTGCAGACGCCACCGCGGCACATTCCCGGCGTGGTGGAGGTCACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGATCGCCCGGACGCTTCGTCTATGTCTCAGCTCTCAACGAACCCACAATCGACTACGGTTTCCAGCGCCTGCAGAAACTCATTCCCCGGCATCCAGGAGATCCAGAGAAGCTCCAAAAAGAAATCATACTGAAACGGGCAGCCGATCTTGTCGAGGCCCTCTACTCCATGCCGAGCAGATCCCCGGGCGGTTCAACGGGCTTCAATTCATACGCCGGCCAGCTGGCGGTCAGTGTACAGGATGGCAGTGGTCAGTGGACCGAGGACGACTACCAACGCGCCCAATCGAGCAGTGTGAGTCCCCGTGGCGGCTACTGCAGTAGCGCCTCTACGCCGCACAGCTCGGGTGGATCGTATGGGGCAACTGCGGCCAGCGCAGCCGTGGCAGCCACCGCCAATGGATACGCACCTGCTCCGAACATGGGCACGCTGTCCTCCTCGCCCGGCAGTGTCTTCAATTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCATCATGCGGCGGCCGCCCATCCGCACCACTACCCGCATCCCCACCAGCCGTGGCACAATCCGGCCGTCAGCCTGAGTTTCAATCCCTTCGCCCTGCCCACCTGCAATACCCAGGGCTATAGCACCAGTCAACTGGTGACGTCAACCAAATAA
- Protein Sequence
- MARNFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAAAAHPHHYPHPHQPWHNPAVSLSFNPFALPTCNTQGYSTSQLVTSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615327;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00615327;