Dvar013798.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila varians
Gene Symbol
JARID2
Assembly
GCA_018150405.1
Location
JAECWK010000135.1:13085879-13093771[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-22 7.7e-19 67.7 0.0 6 89 1790 1871 1785 1871 0.92

Sequence Information

Coding Sequence
ATGGTTGTCTCCAAAGACAACAAGCGTCGCCGCAAGGAGACGGAGACACCTCCCCCTCCTCCGCCAGCAACGGCCAACTCTGCGGCAGGAAGCGCTGCTGCGGCGGTCGAATCCTCGCCCGAAATGCCCAAAAGAACCAAGGTGCAGGCTCAGCGCAAGTTTGCCCAGGGTCAGAGTGCTCCGAGCAGCTCTTCCAGCATATCGTACAGCGCCATCGCAGCCGCAGCTGGACCAAGCACCTCAGGAGCCGACAGCTCACAGCCACCGATCGAGATCCTGCCCAACAAGTGTCCCAAGCCGCAGGACTTCGTCACGTTTCTCTGTTTCCGTGGCACTCCTGCGCTACCAGCTCATTTGGATTACCTCAACCAGGGCAAGCACAAGGAGGCGGCGGCAAATACAACAGGTGCGAATAACAATAACAATGCCAAGAAGATAAGCAACCGAATGCAAGGAAACAAAAAGAAGCGGGGACGGCCGGCAAAAGGAGCCGGAAAAAAAGGCGATACAGTTTCCGCAGAAGCGCCATCAACTGAGAAACCGAAACCTGCGGACAAAATCAATCTCATAGCAGCCGAAAAGTCAGTACGCGCAAATTCCCTGCCCTCGTCAAACCCTTTGCTTCCAGGAGCTGTACGCAAGCGAGCAGAAGTGGTGACGGATGGCAATCGCCGAGGAGCCAGAGGCAGAGCTGCAGCTACGGCCTCTCCGGAAAAATCGGGATCTGCCTCAGAAAATATACGTCGTTCGAATCGTTCCATTACTAAGGAAAGCAAGCCCATCATTGAAGACGATGAAACCCAGGAGGATGAAGAGGATGCTGATGATGATGAGGACGAATTCTTTTCCGCTCACGATGCCACCTCCCGCAATGGCGAAGAAGTCAAATTAGACAGTCCCGTGAAGGCTGAGCCCGCAAAGCGAGGACGCCCCTCGACAGGAAAGCAACAAAAGGCCGCAGAGCCACAGGCACAAGAGCCACCCCAGCCGGCGGCTAAGGAAAAGGCACCCGTAAAGCGAGTTAGACAGCGGGAATCGCCTATTTTTATACCTTCTCCAGAGTCTTCGGGTCGCATGACAAGACAGAGGGCTTTTTTCGAGCCAGTGAAGGTTCCTCCCCACCAGGAGGAGCCTTCAAACCAGGAGCCCGCAAAGGAAGATTCCGAAAAGGAGCCAGATCCCGAACCCGAACCAGAGCCGCCAGTAAAACAGGTCAAAGAGGCCAAGGAAAAGACAAACTCTAGTATTTATGCCAAAGACGCAAAGCAGCAGCTGGAAAATGGAGACAGTAAACTTGGCGTTGGTTCCAAAGGAAAGAAGAGCTTGAATGTCTTTGACTTTAGTTCAGATGATGAGCAGCCGTTGGCCAAGTCCATTAAGCTGAAGAAGGGCGCTAAGAAGGCAGGAGCTGTCGCAACGGCTCCTCCTCCGATACCTAGAAATCGCAAAGGGGCTGCCAAGAAACTAGAAAAGGAGAAGGAAAAGGAAAAAGAAAAGGAACTGGATAAGGAGAAGGAGAAACAAAAAGAAAAAGATCGAGCCAAGGAGAAGGAAAAGGCGAAAGAAGAGGAACCTACTCCGGAACCTCCCAGTGGTGGGAAACGTGGAAAAGCCGGGAAAAAGAAAGCCGAGGATGCTCCAGATGATGAGCAGGAATTGGCTCCACCTTCCTCCAAGAAATCCGCCACCAATGTCCGGGGAGGACGAAAATCTGCTAAGAGCAAAGCCTCAGAAGACGACTCGGAGCCCCAGAGATCCCAGCGTCCGTCGCGTAAAACCAAGGAGGCGGCGGCTATTTACATGGGCATCATTGGTCATAAGCTGCAGCTGGCCGATGACGAGGAGGACGACCTATCTTTAAGCAGCTTTCCGGACATCCCCAACGTCAAGGAGATGGAGAAGATGGAGAACGAGATCAAACGTAATGCGGCGGGAAAGTTAAACGTGCCGGAGTCCACGACGGTGTCTCCGGCAGGCAAGCCCACTCGTAAGCCGTCGCCCGCAGTTGTTGTTCCCGATCCAGTTTCAACCAGCCAGGAGTCCCCCTCTCCACGGGAAGCCGAAGAGGAGAAGCCACCGCCCCCGCTGCCGCCCCGCCGTGGACGTCCGCCAAAAGGAAAGGCTTCTGCAGCTTCCGCACCAGCGCCAGCCAAACCGCAAATCGAAGGCATGCTGGTAAAAAAGGGTTCGTTGACGAAAATATCTGAGCAGGCCAAGCCAAAGGCCAAGTCCGAACATTCAAAAGTGGACTCCGACGAAGAGGAGGACTTTCTAATCAACGAGGAGTTGAACGAAACGAAGCGCAAGCTGGAGAAGAGCTTCAGTGACTCGGATGACGAGCCGCTGGCCATCAAGGTGCCACCGCTGGCAGTCAAGGAGAAGGATGCAGCACCAACAAAGCTGCCCTCTCCTCCCAGTCCGCCTAAGGCAACGCCATCGCCGGCTCAGCTTACCACTTCCTCCTCGCCAGTGGTCCCTTTAGGAGGGCTAGGATTCTCCACAGCGCCGAGCACTAGCCAACTGACTATGTTGCCGCTGACGACCAAGCTGGGCACGCTTCCACTGCCGGTCGGCGGTGTCTCCAATTGTATCCCCCCACTGACCTACTCTCCTTTGAAAGCCATGGAGAAGAAACCGCCAGTGCCCACCTCTAAAATTCTGAATGTGCCCGCTACATACGCGTTGCCTGGGAGCTCGGGATCTGGTTCGCTGGCCCCTGGATCTGTAGGATTTCAGAAAACCTCCTCGTATCTGCCACAGGCATCGCCTCACTACCACTCCGGATACGTACGTCCGCCACCGACGCCAACGCACCAGTTTGGAGGTGGGGCTCCAGCTGGGAGTAAGACTCCCTCGTCGCCGCTTAAGTACCAGACACCACCGACAACCTATCCGCCGCCTATCGAGGCGTACCAGTGTCCCAAGATCAACCCAAACTTTCTGACGCCCAAGTACGAGAGAAGTCCTCTTCCCAGGTCATCGTCATCCACCAACTTTCCTAGTCCTTCACCGGTGAAGTTTCTGTCTACCACATCGGGAACTGCCAGCGCTACGCCAGCGTCGTTGACAAAAAGTCCACTCGCCCCCCCTAATCCATCACCGCCAGTCAGCCAGGTGGTGATTCAGACCTCGAGCTTGAACCTGAGCACCAGTGTTGCAGCCACAGTAAATGCAGCACCTCTACCGGTGGCGTCCACCTCGGCAGCAGCAGCCGCCCAACAGGCAGCCACTCCTCCGCCAGCTCACAGCAACAACAACGCGGGAGCAGGAGCCAGTGGAGCAGGAGCTAGTGGAGCTGGAGCAGCGGCAACTCCAACTGGGGCTAATGTTGACACATTAAAGGATGAAATCGGAAGCATTTTGGCACAGGCTACGCTCATGCCCAGTAAGGAGGAGTCGGGCAAGATTTTTGGGATTGCCAGCGTGAGTTTGGCCCAAAGTTCCGGACCGGATAATACCAAATGCACGCTGGGCAAGTGTGGCTCCATCCATAAGCCTGTTCTGGGACCTGTGGTCCCCACGGAAGGATACTTTGGGGATCAGCTGTCGAGCAAGGAACGACGTAAGGCAAAGGTGAACATGACCCACGAGCAGATACAAAAGTGGTTAATCGAGTGCTCTTCCAATCCGGACGAGATCCAAGATGATTTGGACGACGATTTTGATGAGAGCTTGAGGCCCCAGCAATCTACAACCCCACCTCCAACTCGGGATGACAAGGAACTGAGTGCTAGCTTTAGTTCCTCTTCGAAGAACACCAGAGGAGATCTCGGAAAGAGCGAGAGTGCCTGGTCGGCCAAGGGTCCCTCTCTGAAGGCCACCCCGGTTCTGGTTACTCCACCCAATCGCAAGCAAGAGCAACTGGAACAGGGTGATGGGAAAGACTCGGATGTTATTGAGTTTGAAAAGACATCTTCCACTCCTGTTAATCTCACGCAGAAAATGTCCACCAACGAGACAGGTTCTGGCGAAAAGAAGGCAAACGAACGGAAGACCAAGGACACTGGCAAGGCGGCAGGAAGCAAAGCTACACCGCCGCAGCCACGTAGTGCTGCTGCCACGCCACCAACTCCCATATCAACGCCGACTCCCGTCAAGAGCAGTCCTACTCCTCCGCCGGCAACCAAACAGAAGGGAGAGAAAGGAAGGAAGAATGCTACAGCCTCTGTGGCAACGACAACTACTCCGCCAGCTGCCACACCCACACCACCGACGTCGAATGTTACAAAGCGTACACCGGTCTACAACCAGAAAGGTGTCAAGGCTCCACAGCAGCAGTCTCAGCCGGACAATAAGCCTGTACCCAGCGTAGGAACTGGCATGAAGAGGGAATCCGTTTACGCATTCGGAAAGGAGGAAGAGGCCACCGCAGCCAAGCCTACCAATCGGAGGAAAGCAAATTTAAGTCCCAGTCCAGCACCGCCTGTAGTTCCCAACGCCCTGAGCGAGCGATCGCCGACCAAGAAAAGAGCGGCGGCAACAGCAGCAGCTACGGCGGTCCAACTGACCCTCAGTCCCACCGAGAACTGCAAGATTGATGGGAAGCCGAAGGCAGCAACTGGAAGAGGTGCCAAAAAACAGCAGCTGTCTACTCCAGCACCCAATCCACTCCCGGTCGAAGCCAGCGGGGATTCAGATGGCGAGGGAGCCACTTTCTACATACCCTTGCAGGGAGCAGGTGTCGGTGGCACTGGCGATGGGGGTATCCAGGGAGTGGCCGTCAAGTTGGGAAGAGAAGGTCCAGACGGCCCCAATCAAAAGGTGGTGATGCAGGCTACCCTGGTGACAAAGGCCCAGATGGACACCAATTCGAAGCCTCTGCCGGAGTCGTTAAACACCAACGACCTAGTGAAGACGTTGCTCCACGTTGCGGCTAGCAATGATGCGGCATCCACAACCACCAGTTTGAAGAGCTTACCCAAGGCCAGCACTTCGGCAGCAGCGGGAACTGGAACGGGTCAAGGCCAGGGCTCCAGTTTGGTCCGCGTGAACTCCAACTCGTCATTGTTCTCCGGCTCAGCTAAATCCAGGACAGCGGCACAAACTAGTTCTACGGCAGCAGCCGTTGCCAAGAAGTACAAGGACGACACGCCCATTAAGATGGCCAACAATACGGCTTTCCCGCGGCACGACGATCCCACCCAGATGGTGGAAGCACCCATCTTTCGGCCAACAGAGAAAGAATTCGCCGATCCTATTGAGTTTATTGAGAGAATCACTCCGATAGCGGCCAGGTTCGGTATCTGCAAGATAATTCCTCCGGCCAGCTTCAAGCCGGAGTGTCGGATATCGGATGAGATGAGGTTCACTGCTTACAATCAGTACGTGCATAAGATGCTCCACCGATGGGGACCGAGTGCCAAGGAACTGAGTGCGATTAAGAAGTACCTGGCCACCCAGAGCATCGTGATGAATCACCCGCCTTGGATTGGCGGCATGGAGGTGGATCTTCCGCGTCTATACCATACGGTCCAAGAGCTGGGCGGCTTGAAAGAGGTCATCGAGAAAAAGAAGTGGTCGCGTGTGGCGGAGGAGATGTGCATTCCTAAGTTGGCCCAGGACCGGGTCACCAAGCTGGACGATATCTACTGCAAGTACCTGCTACCCTACGACACACTCTCGCCGGCGGAACGCCAGAAGCTCTTTGACGAAGTCGAGGCAGATTGGGCAAAACGGGAGGCACGAGCTCGTCGGAATGCGGATCGCTTTGTCAACACGGAGAGCGTTTCAAACGAAGAGGACGACGTGAGTAGTGATGAGGACGAGGAGTCCGAAGAGGAGATCGACGGCGTCTCCATGGAGTGCATTGTCAAAGGCAGGAGTATGCCGCTGAGCCAGTTCTACAGGATTGCCAGAAACACCATGGCCCTGTGGTTCAAGAGCACAGATCCCACGGTCAACGAGGTGGAGGCCGAGTTCTGGCGCCATGTAGCTGTTAGGGATAGCCACGTGTGCGTCCATTCTGGTTCGATTGACAGCTCAGGCTGGGGCTATGGCTTTCCAAGTCCGGGTCCCAAAGGAAAAGGCTCCAACTATGCCAGGCATCCTTGGAATCTAAAAGTCCTAACCAACAATGCCGGATCCGTGCTGAGGTCGCTGGGTCCCGTCATGGGCGTCACAGTGCCCACTCTCCACGTGGGCATGTTATTTTCTGCCTGCTGCTGGTACAGGGATCCGCATGGACTCTCCTGGATTGAATATCTGCACACGGGCGCTTCGAAGCTGTGGTATGGCATCCCGGACGACCAAAGTGCGAACTTTAGGGCCGCATTGACCTCGTTGATTCCGACACACTGCCAGAACAAGACCATCTGGCTGCCGTGCGACACGGTGATGGTTCCGCCGCACATGCTCACAGATCGCGGGGTGTCCCTCTGCCGGATCGAGCAAAAACCGGGCGAGTTCATCGTCGTATTTCCCAGGGCGTACACCTCCAGCTTGGCTACTGGATATGTGGTGTCGGAGAGCGTGTACTTTGCCACCATGTCGTGGTTGGATTTGGCCAAGGACGATTTTAGAGACATTCACGAGAGCTGCGAACCTGCCATGTTTTCGCTGGAGCAGTTGCTGTTTGCTTTGGGTTACGATCAGCGGGTCAACTCGGAGGCTCTACACCAAATGCTGCCCATGCTTAATGAGGTTTGCGAAAAGGAATCCGCAGCCAGAGAACAGCTTAGGGCTGCTGGCGTCACTTCCACCGAAAAGGTGCAGGCGGAGAAGGGTCAGAAGGCCAAGAAGCAGCAGCAACCGCCACACAAATCCATCGAGAGTGAGTGCGACCTGTGCCGGGCCAACCTGTACATATCGATGGTGCGGACCGAGGAGGGTAACGTTTACTGCCTGCAGCACGCTCTAAAGAACCTCAACAACGGGAACATCCAGGCCAAGCAATGCAAACTGATATACGCCTACAACGTGGATGATATCCAACAACTAATCCGGCAGCTGCAGGAGAAAATGAATCACAAGGCTGCGGTTAAAAAAAAGTAG
Protein Sequence
MVVSKDNKRRRKETETPPPPPPATANSAAGSAAAAVESSPEMPKRTKVQAQRKFAQGQSAPSSSSSISYSAIAAAAGPSTSGADSSQPPIEILPNKCPKPQDFVTFLCFRGTPALPAHLDYLNQGKHKEAAANTTGANNNNNAKKISNRMQGNKKKRGRPAKGAGKKGDTVSAEAPSTEKPKPADKINLIAAEKSVRANSLPSSNPLLPGAVRKRAEVVTDGNRRGARGRAAATASPEKSGSASENIRRSNRSITKESKPIIEDDETQEDEEDADDDEDEFFSAHDATSRNGEEVKLDSPVKAEPAKRGRPSTGKQQKAAEPQAQEPPQPAAKEKAPVKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVPPHQEEPSNQEPAKEDSEKEPDPEPEPEPPVKQVKEAKEKTNSSIYAKDAKQQLENGDSKLGVGSKGKKSLNVFDFSSDDEQPLAKSIKLKKGAKKAGAVATAPPPIPRNRKGAAKKLEKEKEKEKEKELDKEKEKQKEKDRAKEKEKAKEEEPTPEPPSGGKRGKAGKKKAEDAPDDEQELAPPSSKKSATNVRGGRKSAKSKASEDDSEPQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSLSSFPDIPNVKEMEKMENEIKRNAAGKLNVPESTTVSPAGKPTRKPSPAVVVPDPVSTSQESPSPREAEEEKPPPPLPPRRGRPPKGKASAASAPAPAKPQIEGMLVKKGSLTKISEQAKPKAKSEHSKVDSDEEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPPLAVKEKDAAPTKLPSPPSPPKATPSPAQLTTSSSPVVPLGGLGFSTAPSTSQLTMLPLTTKLGTLPLPVGGVSNCIPPLTYSPLKAMEKKPPVPTSKILNVPATYALPGSSGSGSLAPGSVGFQKTSSYLPQASPHYHSGYVRPPPTPTHQFGGGAPAGSKTPSSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSPLPRSSSSTNFPSPSPVKFLSTTSGTASATPASLTKSPLAPPNPSPPVSQVVIQTSSLNLSTSVAATVNAAPLPVASTSAAAAAQQAATPPPAHSNNNAGAGASGAGASGAGAAATPTGANVDTLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDESLRPQQSTTPPPTRDDKELSASFSSSSKNTRGDLGKSESAWSAKGPSLKATPVLVTPPNRKQEQLEQGDGKDSDVIEFEKTSSTPVNLTQKMSTNETGSGEKKANERKTKDTGKAAGSKATPPQPRSAAATPPTPISTPTPVKSSPTPPPATKQKGEKGRKNATASVATTTTPPAATPTPPTSNVTKRTPVYNQKGVKAPQQQSQPDNKPVPSVGTGMKRESVYAFGKEEEATAAKPTNRRKANLSPSPAPPVVPNALSERSPTKKRAAATAAATAVQLTLSPTENCKIDGKPKAATGRGAKKQQLSTPAPNPLPVEASGDSDGEGATFYIPLQGAGVGGTGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPESLNTNDLVKTLLHVAASNDAASTTTSLKSLPKASTSAAAGTGTGQGQGSSLVRVNSNSSLFSGSAKSRTAAQTSSTAAAVAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWSRVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPHKSIESECDLCRANLYISMVRTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKMNHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00481339;
90% Identity
-
80% Identity
-