Basic Information

Insect: Drosophila vallismaia
Gene Symbol: ham
Assembly: GCA_035047325.1
Location: JAWNPU010000094.1:119226-120872[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.3e-06 0.0037 17.4 0.3 12 41 314 340 310 342 0.84

2 3 7.6e-06 0.022 14.9 2.0 17 44 347 371 341 371 0.88

3 3 0.031 89 3.4 1.3 18 41 377 397 371 399 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.3e-06	0.0037	17.4	0.3	12	41	314	340	310	342	0.84
2	3	7.6e-06	0.022	14.9	2.0	17	44	347	371	341	371	0.88
3	3	0.031	89	3.4	1.3	18	41	377	397	371	399	0.86

Sequence Information

Coding Sequence: ATGAGAGTTATGAGAGAGAAAGACCACTCACCAAGAAAGATGCTTCCTAGCCCGAAACAGGGCTGCGTATACCCTGCCTTAGGATTAATACCCACTTCTTATATATCACATGTACCTTATGATCTGGCCTCCTCGGCAGTGGCTTCCACCTCGTCTTCGTCATCTTCATCGTCGTcgccaacaacaaccactgcgACGTTTACCGCGAGGTtgcatcagcaacagcaacatcaagcCCACCAGCAACATCATACACTGAACCACAATGCAAGGGGTAAAAGAAGAGGCAGCTTGGATCAGCCACTGGATCTGCGATTGGCTCACAAACGGAAGCCTGACTTGGGCGACCAAGGGCCCCTGGAGGACGAAAACAGCAATCTAATAATGTTCGCCAGTGAGTTGGCGCAagttcaaaaagaaaaagagctGAACAATAACCATATAGCAGCTTCACTGGTAGATCTAGGCTTCGATATGAGCCGAAAAATGTTAAGGGCTCTGCGAGAGGGAGGTGATGCTGCCGGTGGTCATGGCGGGTCGGTGGGTCCTGGGTCGGGAGCTCCTACCCTGACTGGTCCGCCATGTTCACTGCCCGCAGTTCATCCCACTCTGTTAGAGGCGATGACCAAGAATTTGCCTCTGCAGTACCGCAACGTATTTGCCGGCGTATTGCCCCGAAAAATTACCAGTCCGtcggtatcttcgagtagtccGACTGGTTCAGACTTTCCTTTCAGATATCCGCTTAAAAAGTGTGATCTCACCTGGCCGCCAACCACTGAGCAACTGCAGCTGGAACTGCCCAGCTCGAATGCCAAGCTTTCACCACCAATTTTGCCGCATCCGCAGCTACAGGATTACCAAACGCGAAGGAAAAACAAAGCTGCAGCAGGAGCAAAGCCGGGAAGCAATCCTGCTGGAACGAACAATATCCCGCAGCGCAACAAGGATCGCTACACATGCAAGTTCTGCGGTAAAGTATTTCCGCGATCGGCAAATCTTACACGTCACTTGCGGACCCACACGGGCGAACAGCCGTACAAGTGCAAATACTGCGAACGTTCCTTCAGCATTTCCTCGAATTTGCAACGCCACGTGAGAAACATCCACAACAAGGAGCGTCCTTTCAAGTGCGAGATCTGCGAGCGCTGCTTTGGTCAGCAAACCAACTTGGACAGACACCTTAAAAAACACGAATCGGACGCCGTTTCGTTGAGTGCTTTATCCGGGGTAAGCGATCGAATGCACTGCATCCGAAGGTTCTGCGAGAATCCCACAGAAGAATCCTACTTCGAGGAGATACGCAGCTTCATGGGAAAGGTTacagagcagcagcaacacgaGCATGATCAGCTGCAGCAGCATCATCACCAACTGCAGTTGCAACCACACAAGTCAACAGCCACATCAGCGGCTAGCTCGTGTTCCTCCTCCCGTGACACGCCCACTTCTTCGCAGGCGGAGGAGACCGATAGTGTGGCGCTCATCTCTGCTGCCGATGCCGGAGCAACATCGTCTAACAAGGAGAAGGCAGAGGATGAAGACGATTCGCAGCCTTTTCCAGAGCGGAAGATAACGCTGACCTCAAAGCTTTGTATCGCAAAAACAACCACGCCGGACAAATCGAGTAAGGAAGAGGAATCCTAA
Protein Sequence: MRVMREKDHSPRKMLPSPKQGCVYPALGLIPTSYISHVPYDLASSAVASTSSSSSSSSSPTTTTATFTARLHQQQQHQAHQQHHTLNHNARGKRRGSLDQPLDLRLAHKRKPDLGDQGPLEDENSNLIMFASELAQVQKEKELNNNHIAASLVDLGFDMSRKMLRALREGGDAAGGHGGSVGPGSGAPTLTGPPCSLPAVHPTLLEAMTKNLPLQYRNVFAGVLPRKITSPSVSSSSPTGSDFPFRYPLKKCDLTWPPTTEQLQLELPSSNAKLSPPILPHPQLQDYQTRRKNKAAAGAKPGSNPAGTNNIPQRNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSDRMHCIRRFCENPTEESYFEEIRSFMGKVTEQQQHEHDQLQQHHHQLQLQPHKSTATSAASSCSSSRDTPTSSQAEETDSVALISAADAGATSSNKEKAEDEDDSQPFPERKITLTSKLCIAKTTTPDKSSKEEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00481805;
90% Identity: iTF_00546241;
80% Identity: iTF_00615181;