Basic Information

Insect: Drosophila ustulata
Gene Symbol: salm
Assembly: GCA_035047365.1
Location: JAWNPT010000098.1:5683137-5693322[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5e-06 0.00034 20.9 0.9 1 23 485 507 485 507 0.98

2 7 9.9e-06 0.00067 20.0 2.1 1 23 513 535 513 535 0.98

3 7 0.017 1.1 9.8 1.5 2 23 931 952 930 952 0.98

4 7 7.1e-08 4.8e-06 26.7 0.5 1 23 958 980 958 980 0.98

5 7 0.00022 0.015 15.8 2.3 1 23 990 1012 990 1012 0.98

6 7 0.029 1.9 9.1 2.9 2 23 1414 1435 1413 1435 0.97

7 7 2.8e-08 1.9e-06 28.0 1.3 1 23 1441 1463 1441 1463 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5e-06	0.00034	20.9	0.9	1	23	485	507	485	507	0.98
2	7	9.9e-06	0.00067	20.0	2.1	1	23	513	535	513	535	0.98
3	7	0.017	1.1	9.8	1.5	2	23	931	952	930	952	0.98
4	7	7.1e-08	4.8e-06	26.7	0.5	1	23	958	980	958	980	0.98
5	7	0.00022	0.015	15.8	2.3	1	23	990	1012	990	1012	0.98
6	7	0.029	1.9	9.1	2.9	2	23	1414	1435	1413	1435	0.97
7	7	2.8e-08	1.9e-06	28.0	1.3	1	23	1441	1463	1441	1463	0.99

Sequence Information

Coding Sequence: ATGAAAAATCTCTTGACAAACGTTCTGTGTGCGATGCGTAGTGACTTTAAGGATAATCACCAGGAGACCATCAATAAAATGATACAATTTGGTACCGTCAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCTAGAAGTGCCGACAAAGAAATAGCAAGTGATCAGGAGGATAATGGCGTCTGCTCGCCACTGACATCCGCAACGGCAACCGCAAGCGCGGACAACAGTCCTAGCCCCAGTCGGAGTCCGCGGCGACAGAGCGAGGACGAAGGGGACCGGGAGACAGTGAGTAAGCTGGAGCAATTAGATAATGATGCCGATAAGGCCGATGCCGTAGAGGATCATAatcacaaccacaacaataacaacaacaaagtgatTATGACCAAACCGCCAGTGGAGAACGAGCCAGAGGAACACAGCGGCAACTCCAATGCCTCCGTGCCACATTCACCCGCCGCGGCGGCATCGGTGACAGAGGAGGCGGCTGCCCAGCCAACTCCTACGGAAGCAGATGTGGATATGGAGCTGCTGGAGGAGGATACGCCGATTCGTCCATGTGATCGGACCTCGACGACGCCAACAGCGTCGCAGGCAGGAAGTGccggagctgaagctggagttggagctgcGCCTGTGACCCTCGAGGCGATACAGAACATGCAGATGGCCATTGCGCAGTTCGCGGCAAAGACAATTGCAAACGGTTCCTCGGGAGCGGACAACGAGGCGGCCATGAAGCAGCTGGCCTTCTTGCAGCAGACACTCTTcaatctgcagcagcagcagctcttcCAGATTCAGCTGATCCAACAGCTGCAGTCCCAGCTAGCCCTCAACCAGGTGAAGCCGAACGAAGAGGATGCCGAGGACGAGCTCGAGCCCGAGGAGCGCGAGGATGGGGAGACAGACACgtacgaggaggaggagcgcaTTGCGGACATGGAGCTCCGCCAAAAGGCCGAGGCGCGCATGGCCGAGTCCAAGGCGCGACAGCATCTCATCAATGCTGGTGTCCCACTACACGAGCACTCCAGATCCGTCTCACCCCCTGCCACAGCGGAGGCGCTCTCTGCGGACTCGCTGAAGCGCAAACGCGAGGAGGACGCCTGTGTGAAGCCGCTCAGCTCTAGCATGAAGCTGACTggggagcgggagcgggagcgggaacgggaacgggagaGGGAACGAGAGAATGCCAAGGATGCGCTTTCCAAGCTCAAGGAAATGGAGAACATGCCGCTGCCCTTCGGCTCGGACCTGGCCTCCAGCATCATCACCAACCACGATGATCTCCCAGAACCCAATTCATTGGACCTGCTGCAGAAGCGAGCACAGGAAGTGCTCGACTCTGCCTCCCAGGGAATTCTGGCCAACAACATGGCCGATGACTTCGCCTTCGGGGACAAGTCCGGAGAAGGCAAGGGTCGCAACGAGCCCTTCTTCAAGCACCGCTGTCGGTACTGCGGCAAGGTCTTTGGCTCCGACTCGGCTCTTCAGATCCACATCCGATCCCACACGGGCGAACGTCCCTTCAAGTGCAATGTGTGCGGCAGTCGCTTCACCACCAAGGGCAACCTCAAGGTGCACTTCCAGCGACATGCGCAGAAGTTTCCACACGTGCCTATGAACGCCACGCCCATTCCGGAGCACATGGACAAGTTTCATCCGCCACTGCTGGATCAAATGTCGCCGGACAGTTCGCCCACACATTCACCTGCTCCAGCGTCAAGTCAGCCCGCGCCTTCGACGTCAGCTTTGACACAGGCCCAAGCCCAGGCGCAGGCAGCGATGTCAATGTCCTTCCCCTCGAGTCCCGCCTTTCCTGGTCTGCAGGGTCTCTACCGCCCGCCCATGGAGTTGCTGAAGTCGTTAGGCGCTGCCGCTGGCAGCTCCGCCGGCCTGCCCTTCTTCCCCCAAATGCCCGGACTGGGCGCGGCTCTGAAGCACAGTCAGCAGCAGAGCCAGGACATGCCCACAGATCTGCGCAAGAGTTCGGGGCCCAGCTCGCCACACGAAGAGGAGGAAGACTTGTCGATGGGTCGTCTGCCTGTCAAAACAGAGCTGCTGGATGAGGATAAGCCCGACAACTCGATGCAGGACTCGACGGCAGCAGACGGCGCTGAGCTGGACGTGGATGCAGAGCCTGAGCCGGAGCCACTGCCGCTTGAGGTGCGCATCAAGGAGGAGCGCATCGACGAGGATCAGGACGCGGAGCAGGAGCTGCACTGCGAACCGCAGTCGGAAGCAATCTCCCGACGCACGCCGTCGCCCTCGCCGTCGCGTGTGGCGCAGTCGCCGCCTCTGATGTCCCGGCAGCATCTTCACAGCCACTCGGCGGCCATGCTGGCCTATCCCCCGGTGGTGCAACCGATTCAACCGGCAGCACTCATGCATGCCCAGTGCTCGCCCGGCTCGCAGTCGCATCTGGATCAGTTGCCGACACCGGGGCAGCTGCCGCCAACGATGCCGCATCGCGAGGACTTCTTCGCCGAGCGCTTCCCGCTCAACTTCACCACCAAGACGCTGTCGCCGGAGCACCACTCACCCATTCGGTCGCCCGCCAACCATGGCCATGGTCATGCGCATGGCCACGCCCACCCGCACGCCCACACCCACATTCCGCGATCGCCGTTCTTCAATCCGATCAAGCACGAGATGGCGGCACTGCTTCCGCGGCCCCACAGCAACGACAACTCGTGGGAGAACTTCATCGAGGTGTCCAACACCTCAGAGACCATGAAGCTCAAAGAGCTCATGAAGAACAAGAAGATCAGCGATCCCAACCAGTGCGTTGTCTGCGACCGCGTGCTCTCCTGCAAGAGCGCCCTGCAAATGCACTATCGCACCCACACGGGAGAGCGGCCCTTCAAGTGTCGCATCTGCGGACGCGCCTTCACCACCAAGGGCAACCTCAAGACCCACATGGCGGTGCACAAGATCCGCCCGCCCATGCGTAACTTCCACCAGTGTCCGGTGTGCCACAAGAAGTACTCGAATGCGCTCGTCCTGCAGCAGCACATCCGCCTGCACACAGGCGAACCCACCGATTTGACCCCGGAGCAGATCCAGGCTGCCGAGATCCGCGATCCGCCGCCTTCGATGATGCCGGGCCACTTCATGAATCCCTTCGCAGCGGCCGCCTTCCACTTTGGCGCGATGCCCGGTGGAGGTCCCGGTGCTCCACCAGGAGCTGCCGGCATGCCCGGCGGTCCGCACAACGGTACCTTGGGTTCGGAGTCGTCGCAGGGGGATCTGGATGATAACATGGATTGCGGGGATGGAGACGACTTTGATGATGCCTCCTCGGAGCATCTGTCGAACAACAATGAGTCGGCGAGCGACGATCGACCGCGCTCCGGCGACGACTTCAAGTCGCTGCTCTTCGAGCAGAAGCTGCGCATTGATCCCACCGGTGTGGTCAACATCAATAGCCATCAGCGCCCGCGCTCCGCCGCTAGCAATGCCAATTCCATTGGCTCCgtctccgcctccgcctcacCTTCCGCTCCCACCAGCCCCAGCTCGCAGCCCAAGCCTAGCTGTTCGCCTGTACGCTCGATCTCGGAAGCCTCTCAGGGAGCGTTGGATCTGACACCGCGGGCAGCTCCTGCCACGCTGGggtccagctccagctcgagGTCACCGCTGCCCCTGGCGGCCGAGCGCAAGGAGAAGACTCTTAGCCCGCAGATAGACAGACAGCAACCGCCGTCACGCAGTCCGAACGGCCACGCGTCACTGCTTTCCTCCCCGCTGCCGCCTTCGGTGGGCATCGATTGCCTGCCGCCTGGACTGCAGCAtcacctgcagcagcagcaccagcatctgatgcagcagcaggctgcagtggcagctgcagctgccgcccaGCACCATCATCACCAGATGCAGCAACACGCCGCCGCTCTGCATCAGCACCAGGAGCAACTGCGTCGCGAGGCTCAGGAGGTGCAGcagaaggcagcagcagcagctgccgccgccgcagccgccGTCCAGCGTCAGACGTCGCCACAGCCGTCGCCGAGATCGAGTGAAGCCAGCGGCCCCAGTCCTGGTCAGCCCAATCCGCTGATGGCGGCGCGTCCGCCCTTCGGCATGTTCCCCAACCTTCCCATCTTCCCGCCGGCGACGACGCAGAATATGTGCAATGCCATGAACCAGATCGCGCAATCCGTGATGCCGGCGGCGCCGTTCAATCCGCTGGCGCTGAGCGGCGTCCGGGGCAGCACCACGTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCTGCGCTTGAGATTCACTACAGGAGCCACACCAAGGAGCGTCCTTTCAAGTGCAACATCTGCGATCGCGGTTTCACCACCAAGGGCAACCTCAAGCAGCACATGCTGACACACAAGATACGCGACATGGAGCAGGAGACCTTCAGGAATCGTGCAGTAAAGTATATGAATGAGTGGAGCGACGATCGCGAATAA
Protein Sequence: MKNLLTNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSADKEIASDQEDNGVCSPLTSATATASADNSPSPSRSPRRQSEDEGDRETVSKLEQLDNDADKADAVEDHNHNHNNNNNKVIMTKPPVENEPEEHSGNSNASVPHSPAAAASVTEEAAAQPTPTEADVDMELLEEDTPIRPCDRTSTTPTASQAGSAGAEAGVGAAPVTLEAIQNMQMAIAQFAAKTIANGSSGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQVKPNEEDAEDELEPEEREDGETDTYEEEERIADMELRQKAEARMAESKARQHLINAGVPLHEHSRSVSPPATAEALSADSLKRKREEDACVKPLSSSMKLTGERERERERERERERENAKDALSKLKEMENMPLPFGSDLASSIITNHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADDFAFGDKSGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTHSPAPASSQPAPSTSALTQAQAQAQAAMSMSFPSSPAFPGLQGLYRPPMELLKSLGAAAGSSAGLPFFPQMPGLGAALKHSQQQSQDMPTDLRKSSGPSSPHEEEEDLSMGRLPVKTELLDEDKPDNSMQDSTAADGAELDVDAEPEPEPLPLEVRIKEERIDEDQDAEQELHCEPQSEAISRRTPSPSPSRVAQSPPLMSRQHLHSHSAAMLAYPPVVQPIQPAALMHAQCSPGSQSHLDQLPTPGQLPPTMPHREDFFAERFPLNFTTKTLSPEHHSPIRSPANHGHGHAHGHAHPHAHTHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGAPPGAAGMPGGPHNGTLGSESSQGDLDDNMDCGDGDDFDDASSEHLSNNNESASDDRPRSGDDFKSLLFEQKLRIDPTGVVNINSHQRPRSAASNANSIGSVSASASPSAPTSPSSQPKPSCSPVRSISEASQGALDLTPRAAPATLGSSSSSRSPLPLAAERKEKTLSPQIDRQQPPSRSPNGHASLLSSPLPPSVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAAALHQHQEQLRREAQEVQQKAAAAAAAAAAAVQRQTSPQPSPRSSEASGPSPGQPNPLMAARPPFGMFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDDRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00534052;
90% Identity: iTF_00520828;
80% Identity: -