Basic Information

Insect: Drosophila ustulata
Gene Symbol: -
Assembly: GCA_035047365.1
Location: JAWNPT010000057.1:45521084-45523170[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.55 37 5.1 0.3 1 17 38 54 38 55 0.83

2 10 0.0036 0.24 12.0 3.3 3 23 217 237 215 237 0.97

3 10 0.00049 0.033 14.7 1.2 1 23 263 284 263 284 0.97

4 10 0.00047 0.032 14.7 1.0 1 23 290 312 290 312 0.98

5 10 5.3e-05 0.0036 17.7 0.7 1 23 348 370 348 370 0.97

6 10 9e-08 6.1e-06 26.4 0.9 1 23 376 398 376 398 0.99

7 10 0.0033 0.22 12.0 6.5 1 23 404 426 404 426 0.98

8 10 3.8e-06 0.00026 21.3 0.6 1 23 432 454 432 454 0.98

9 10 2.9e-05 0.002 18.5 0.0 1 23 458 480 458 480 0.99

10 10 0.0066 0.44 11.1 0.0 3 23 504 525 502 525 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.55	37	5.1	0.3	1	17	38	54	38	55	0.83
2	10	0.0036	0.24	12.0	3.3	3	23	217	237	215	237	0.97
3	10	0.00049	0.033	14.7	1.2	1	23	263	284	263	284	0.97
4	10	0.00047	0.032	14.7	1.0	1	23	290	312	290	312	0.98
5	10	5.3e-05	0.0036	17.7	0.7	1	23	348	370	348	370	0.97
6	10	9e-08	6.1e-06	26.4	0.9	1	23	376	398	376	398	0.99
7	10	0.0033	0.22	12.0	6.5	1	23	404	426	404	426	0.98
8	10	3.8e-06	0.00026	21.3	0.6	1	23	432	454	432	454	0.98
9	10	2.9e-05	0.002	18.5	0.0	1	23	458	480	458	480	0.99
10	10	0.0066	0.44	11.1	0.0	3	23	504	525	502	525	0.95

Sequence Information

Coding Sequence: ATGTCAGGACACTCTGGGAAAGGCGTCAAGGCAACTTCGTTGCAGTCACACGTGGAGAACAAAAATCAAAGTATAGATCATTTTATAATTGATACGTGTTCCGATGAGATCTATTACTGCGAGGACTGTGGCAACGACTTCGACAGCATCGATTCGTATAATAGGGCGCACAGTGGAACGGACAGTTGCACTGGGGCCGCTGACACCAGATCTCTAGTCACTGTGCACTCTATTGATGTTAAGGATGAACTTTATTTGGGCGAAGATGCAATTGATGGCGAATCGGTTGTGGTTGAAGATGACTCAATTGAGGAACTAGACGATGTCAGTGAGCCGCAACTGTGGGAAGTGTTGGAGGATAATGAAGTTGTACCTGTCTGCGAGTCCCCAACCGACAGTCTTCCTCAGACGGAAGCTGATGTTGAATTCGAGGAGCTGCCTAATAAATCAGAGCGCTACTTTTGCTTCGATTGCCACAGCATCTTCGAGACGCGACAGCGCGCCGAAGAACACAGCTGCCCTCAGTCCGAAACGAATGGCGATCCGAGTTCGAAGCAAAACAACGCATTATTTGCCAAGACTCAGACGCCAGTAAGGCGGAAAGTGACAAATAACACTTTggctgacagcagcagcagtagcacaATATGTAATATTTGTTCGACAAAGTTTAGTTCAGCGAAATGTCTCAAGTTTCACATGCGAATCCATAACGAGCGGGCGTCCAAGTCCATACAGGATGCGTTGCCCGTTGGGGCACATCAACAATACAGCGAACTGGATCAGTTCTATTGCGAAATCTGCAATAAGAGCTTCGAGCAAAATCTGTTGACGGTGCACAAGCAGATGCATCAGAGCCAGAAGCAGTTCTCTTGCGGCACTTGCAATCGCAAGTTTGACAATGTCACCAACTACGAGATGCACCTCAAGATTCACGAGCGCCAAATGatgaacaaaaacaacagcaaaaccaCCGGCAATACAAAGAGCAacgataatgataataaaaagGCCACCGCCAATGGCAGTGATAAACCAGGATTTGCCTGTCAATACTGTCAGCGAGTGTTCTCTCGTCCCTACGAGAAGGTGAAGCACGAGCGGGTTCACACTGGGGAGAAGCCGTACAGTTGTGAGGTGTGCGGCAAAACCTTTCGTGTCTCCTACTCTCTCACACTTCATTTGCGAACGCACACCAACATACGTCCCTATGTGTGCACGACTTGTAATAAACGATTCAAGTCGCATCAGGTTTACTCGCATCATTTACGGATACACAGCACGGAACGTCAGTATGCCTGTGATAGTTGCCCCAAATCATTTCGCACCTCGGTGCAGTTGTATGCTCACAGGAATACCCATACAAAACCGTATCAATGTGCCGTGTGCAATCGACCGTTTGCCTCTCTGTATGCCGTCAAAGCACACATGGCAACCCATCGCACTGGCGACGCCAAGAGCATCAGCAATGCGGCAGTCAAGAGTCAGCAGCTGTCGAATAAATATTGGTGTGTTACCTGCGGGGCGGAATATGCGCGCCCCTTTGCGTTGCGGCTTCACATGAAGGCGGCGCACGGCCATCCCGATGATGCGGACACTCGCCAAGCCAAGGAGCTTCCACCCAACGACAGTTCTGCCTGTGACAGTGATGAAGTCATGGTACCAGATACGGAAACGGCTGTGCTCATAGCGGCGGCCAATGCAGATGCGGCTTATTTAGATGCTGGCGATAATGATCTAGATTCGGTTAGTGTTGTCCCCAAATACGAGGAATGCATTGAAGTCTCAACGGATGCGTTCGATGTGGAGACATTTCACAGCGAGGAAATCATTACAGACTGGCTCAAGTGA
Protein Sequence: MSGHSGKGVKATSLQSHVENKNQSIDHFIIDTCSDEIYYCEDCGNDFDSIDSYNRAHSGTDSCTGAADTRSLVTVHSIDVKDELYLGEDAIDGESVVVEDDSIEELDDVSEPQLWEVLEDNEVVPVCESPTDSLPQTEADVEFEELPNKSERYFCFDCHSIFETRQRAEEHSCPQSETNGDPSSKQNNALFAKTQTPVRRKVTNNTLADSSSSSTICNICSTKFSSAKCLKFHMRIHNERASKSIQDALPVGAHQQYSELDQFYCEICNKSFEQNLLTVHKQMHQSQKQFSCGTCNRKFDNVTNYEMHLKIHERQMMNKNNSKTTGNTKSNDNDNKKATANGSDKPGFACQYCQRVFSRPYEKVKHERVHTGEKPYSCEVCGKTFRVSYSLTLHLRTHTNIRPYVCTTCNKRFKSHQVYSHHLRIHSTERQYACDSCPKSFRTSVQLYAHRNTHTKPYQCAVCNRPFASLYAVKAHMATHRTGDAKSISNAAVKSQQLSNKYWCVTCGAEYARPFALRLHMKAAHGHPDDADTRQAKELPPNDSSACDSDEVMVPDTETAVLIAAANADAAYLDAGDNDLDSVSVVPKYEECIEVSTDAFDVETFHSEEIITDWLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00595393;
90% Identity: iTF_00520781;
80% Identity: -