Dtsa002022.1
Basic Information
- Insect
- Drosophila tsacasi
- Gene Symbol
- pnr
- Assembly
- GCA_018904565.1
- Location
- JAEIHY010020060.1:146028-150259[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 3.8e+03 -2.1 0.2 22 27 21 26 18 28 0.67 2 2 4.1e-17 1.5e-13 50.4 2.5 1 35 305 338 305 339 0.98
Sequence Information
- Coding Sequence
- ATGCAAATATTCAACTGTCTCTCTATTAAGGCAATGCCACACGATGGATTACCCAACTTGATCTGCACTGATTGCAGGGCAAAGTTGGATTCCTTTGAGAAATTTCGAATTATGGCGAACAATTCAAATAATGCTTTGAAAGAATTTTTAAATATATCAAAATCTCTGTTACTAGATCCAAACGAGTTGGATGATAAGCTTGATGAAATTTTAAAGGCTTCATCGGAGGCTATAGCTGCCAAGGCTCTTACTGAGCTTAGCACATTTTCTAAGGTTAAGTACGAAAACAACAGTAAAGTAGATTCATCCAGCACCCATCAGCAGCAGCCAGTGGATCGGAAGATTGAGATTAACAATCAAGAGAGCGCAGCGCAGCAGCAACAGCAGCAGCAGCATAGCTTATACCCAGTTAGTGGTGGTGGTGGGTCCTCCGCCGCCGCCGCTGCCGATTACAAGCTAAAGGCACCGAAGGCGAGTACCAACTCCCTGCAGGATTCTGGCGACAGCTCCGACTCTCACAAACTGGAGATGGACATTACGTCCTCGATAAACGATCGAAAGACCCCGGATAGCCTCAGCTCGGATCATGCAACTGATGCGGCAACCACTCAACTTTGGCAGGCACTGGCCCGCTCAGCTGCTAAAAGCAAGGAGGAAAATCAAAATCAGGCTACTGAAATAATTCGTAGCATGATGAGCCAGTCTTTCGTGTTTCCGGTTCCGTCAACAGTATCATTTACAAAAGTACCTGAAGAACCCATAGCACTATTAAAGGATCTATCAGAGGCTCAATCCATTAATGAGAACGTGACTGATACTTACGCCCCTTCAGAAGCAACTCCAGAGGAAAAGAAAGATAAAAGGAACATAAACCTTTTTAATGCCATACCTGGTGCTCAAAAAGATATGTCATGTTCCAATTGTGGCACACTCACCACCACAATTTGGCGGCGAAGTGTTCGAGGCGAAATGGTATGCAATGCCTGCGGATTATACTTCAAGCTGCATGGTGTCAACAGACCGCATTCGATGAGACGCGATACCATACACACCAGACGCAGGCGTCCTAAAGAATTGGAGCGATCAAAAAAGAAACACAAGCAAATGTCATGTTCTACAATGGAACCAACAAAACCAGATTTCATGACGTCTAGGGAAGCCCTTGATATTTCTGGTCTGGTTTTGAATACATACAAAAAGGAAATCGACGAGTCCGAGGCCGCAGCAGCACTTAAAGATATTCTATTGAGGCGAAAGAAATCGAATTCTTTGCCGGCGTTTAATGATACCTGTGAAAGTGCGGATCTATCCGCACCGCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATAA
- Protein Sequence
- MQIFNCLSIKAMPHDGLPNLICTDCRAKLDSFEKFRIMANNSNNALKEFLNISKSLLLDPNELDDKLDEILKASSEAIAAKALTELSTFSKVKYENNSKVDSSSTHQQQPVDRKIEINNQESAAQQQQQQQHSLYPVSGGGGSSAAAAADYKLKAPKASTNSLQDSGDSSDSHKLEMDITSSINDRKTPDSLSSDHATDAATTQLWQALARSAAKSKEENQNQATEIIRSMMSQSFVFPVPSTVSFTKVPEEPIALLKDLSEAQSINENVTDTYAPSEATPEEKKDKRNINLFNAIPGAQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSCSTMEPTKPDFMTSREALDISGLVLNTYKKEIDESEAAAALKDILLRRKKSNSLPAFNDTCESADLSAPLNLVSSENNAKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00533461;
- 90% Identity
- iTF_00524783;
- 80% Identity
- -