Dtsa018205.1
Basic Information
- Insect
- Drosophila tsacasi
- Gene Symbol
- kn
- Assembly
- GCA_018904565.1
- Location
- JAEIHY010017513.1:2370-4124[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-119 1.2e-115 387.4 0.0 205 384 1 209 1 213 0.99 2 2 7.6e-08 0.00084 18.0 15.1 422 519 214 311 209 327 0.63
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAGGTGGTGATCTCCACACAGGTGGCCGTTGATGGACCACTGCTGGCCATCTCCGACAACATGTTCGTGCACAACAATTCGAAGCACGGGCGGAGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCCCCACTGCCCGTGGCCACGCCCTGCATCAAGGCGATCTCACCCAGCGAGGGCTGGACAACTGGCGGCGCCACCGTTATCATTGTGGGAGATAACTTCTTCGATGGCCTCCAAGTGGTCTTTGGCACCATGCTGGTCTGGAGCGAGCTGATCACCTCGCATGCGATTCGGGTGCAGACGCCACCCCGGCACATTCCCGGCGTGGTCGAGGTGACGCTATCCTACAAGAGCAAGCAATTCTGCAAGGGGTCGCCCGGTCGCTTCGTCTATGTCTCAGCTCTCAATGAACCCACAATTGACTACGGTTTCCAGCGCCTGCAGAAGCTTATACCCCGGCATCCTGGTGATCCCGAGAAGCTGCAGAAGGAGATAATCCTCAAGCGAGCAGCCGACCTGGTCGAGGCACTGTATTCCATGCCCAGCAGATCCCCGGGCGGCTCTACAGGCTTCAACTCCTACGCCGGCCAGCTGGCGGTCAGTGTGCAGGATGGCACAGGTCAGTGGACCGAGGACGACTACCAGCGGGCCCAGTCGAGCAGCGTGAGTCCGCGGGGTGGTTACTGCAGCAGTGCCTCCACGCCGCATAGTTCGGGAGGATCCTACGGAGCCACGGCTGCTAGTGCGGCGGTGGCTGCCACTGCCAATGGCTATGCACCTGCACCCAACATGGGCACGTTGTCCTCCTCGCCCGGCAGCGTCTTCAACTCGACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCACCACCATGCGGCGGCCCATCCGCACCATCACTACCCGCATCCCCACCAGCCCTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAAAHPHHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615327;
- 90% Identity
- iTF_00359257;
- 80% Identity
- iTF_00484922;