Dtru006535.1
Basic Information
- Insect
- Drosophila truncata
- Gene Symbol
- -
- Assembly
- GCA_008042515.1
- Location
- VNJQ01005007.1:150908-156144[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00032 0.028 14.9 1.3 2 23 155 176 154 176 0.97 2 15 7.1 6.2e+02 1.3 4.3 1 21 182 202 182 205 0.93 3 15 0.00011 0.0096 16.4 1.9 1 23 405 427 405 427 0.98 4 15 3.5 3.1e+02 2.2 2.3 1 23 433 456 433 457 0.92 5 15 0.31 27 5.5 3.6 1 23 479 502 479 502 0.93 6 15 0.001 0.091 13.3 1.9 3 23 827 847 826 847 0.92 7 15 0.042 3.7 8.3 1.4 1 23 853 876 853 876 0.98 8 15 4.9 4.3e+02 1.8 0.8 3 23 914 934 912 935 0.84 9 15 0.0025 0.22 12.1 0.4 1 23 956 979 956 979 0.97 10 15 0.00077 0.067 13.7 0.3 1 23 1170 1193 1170 1193 0.94 11 15 0.016 1.4 9.6 5.0 1 23 1205 1227 1205 1227 0.98 12 15 2.4e-06 0.00021 21.6 0.4 2 23 1233 1255 1232 1255 0.97 13 15 0.0026 0.23 12.1 1.3 3 23 1264 1287 1263 1287 0.89 14 15 0.00033 0.029 14.9 0.2 1 23 1294 1316 1294 1316 0.96 15 15 0.0095 0.83 10.3 0.6 1 23 1322 1345 1322 1345 0.96
Sequence Information
- Coding Sequence
- ATGGCATTGAGTAAACGGATTAACCCGAACACGGACGCCCTCCCGGGCGTCTCGGAGTTGAACTACAAGTTTGCGTGTCGCTGCTGCCTGAAGTCGGACGCCGAGTTCGTTAAGCTAGAATCGGTGTCGGTGGCGCGTAGCCTGGATCCAGCCAGTGAGGATGATAAGGTTTCGCTCCTACGGTGCCTTCTCTACTGCGTGCGCGCGGAGAATGCGCCGGAGCTGCCGCAGTACATCTGCATCGAGTGTAGCAAAAGCCTGCAGGTCGCCTACTATTTCCTGCAAAATGCAGTGCGTGCCCACGAGATCCTTTGCCGCAAACTGTGTCCTGGCAAGGCATGGAGTACGGAAGGCAAACGCCTAAATGGGGCCATGGGCCAGCGCTTTCAACCTTCGCCATCTCCCAAGGAGACGGCGACGAGTTTGGGGGACAGGACGAGACCGCCAAAGAGCATGCGGCAAGAGTGTCAGGTGTGCGGCGAGATCTTCCACAGTCGCATGGAGCTCAAGCAGCACCTCCGGCAGCACACAGATGGAATCTCTTACCAATGCAAAATGTGCAACTTTACCACGCTGAAACAGCGTCAGTTACTGGATCATTATCGCTGCGATCACTCTATGACTCCCAATCAGGCGGAGGAACACGTTAAGGCGAGTCCACTGCCGAAATCTCCCATTAAGGAGGATGAAGTCAAGGCAGTGTGCACGCTCGAAGACATGGAGCTGCTAATACCCACTGTGCTCACGCCGGAGGACTACGTTCAGCCCACGATTGATTCGGAACAGCTGCGCGATCTCGAGCAGCAGCTGGCCGTCAGCATGGGCGATGCAGTGACCGAAGTGGACAGCCTAACATCCACATTGCCGCCCATGGACACGGCACACAATGTGAGCATCGGCACGGAGTATCTGGTTTTGCCGGATGGATCCCTGCAGCAGGTCAACGGAGGAGGCGTTGTAATTGAGTACATTGACGACAGcaagccgcagcagcagccgccgccgccgccgccgccacctccTCAGCATACTCCGCATATCAACATTAGCCTGCAAAATCTCCTCGGTCCCGATGAAAACGATGCGATGGATATCGATGTCAACGAGCTAATTGTCGAGGATATGATGACGATAAATAAACCCACCATTTCCACTGTACTTCCAAACCCAGCCAAGCCAAGGCCAACTGTTGGCGTATCCCAAAACTTCAAACACAAGTGCAGTATATGCCCCAGGACGTTTTCCTCTGTGCCACGCCTGAAATCTCACCAGTTAACCCACAGCAATTTGCCCAAGTTCTTCTGCGACCAGTGTGACTTTTACTCGCTGCGCAGTGTCGATCTCATCGAGCACTACAAGACTACGCACCACCGGGTGGATGAGAACGGTGGAACCAGTCAGGAACCAGCGCAGGGCTCGGAGGAGACGGGCGTCTATTCGTGCGACATGTGCCTCTTTGAGACACGCACATGCAGCCAGTTAAGGACACACTACACGGAGCAGCACGAAATTCAGCCCACGGAAGTTCAGTTACGTCCCAGTTGGACGAACAATGGCGGCAATGGGACCAACAACAAGGAGCCGCCTTTGTCAGGCAGGCCAGAACCTGCCGATCTGCCAGTGGCCATTAAATATCCGCCGCTAAATGCAGATGCGCAGGTGCCAGtgcaattgcagcagcaaGTTCAAGTGCAGCAGCAAGTTCAAATGCAGCCGCAACAGGTGGTGGTCACCACACCAACAACGCTCATCACACAGACGAGTAACCACATTAACGTAGTGGTGGATACCACACCGCTGTTCTATGCATCCACCACTTCCAGTGCCGTGCAGGCAGTGCCAATGCCGGTGCAGACTATGCCAGGCCCTGTTCAGGCTATGCCTGATCCTGTACAGGCTATGTCTGATCCTGTTCAGGCTATGTCTGATCCTGTGCAGGCTTTGCCAGTGCAGAACACGCCAGTGTCGGTGCAGGTCATGCCTGTGATGCAGCCCGCCAGCGAGAACAACAGCAATGCATTCGAAATTCAAAATCCATTTCCAAAAATACAACCAAGCAACGAGCAGACGGAGGAACCTGTTACCGTTGAGCCAATATCGACGGCCAACACTTCCAATATCTCAATGTTTGGCGATATGCAGGATTTCATTGATAACACCGATGTGGCTGCCATATGCACGATACCAGCGGACGATATGCCCGTGGTGGATGGCGACGATATTGTGATCGATAATAACAATATCAGCCTGGACTTTGATGCCGAAAATCTGTTTGAGGAattcgaggaggaggacgagacGGTGGGTGAAGACGagggcgaggaggaggaggaggaggaggaagaggacgaGGCGGACAATGATGATGAGAATGACAACAACGAGGCTGCCACAGATCAAAATTTGCTGCTTACCAGCGACGATGATGACGTGGACGACTTTGACGATGAGCAATCCAAGCATCTGCAAAAGCCCTACTGCATTTATTGCAACAAGAAGTTCACCAGTCAATACAAGTTCGAGAATCATATGTTTGTCCATCGGGgcCTGGCACCCTATCGCTGCGAGCTGTGCACCAACCTCTACAATATGAAGCGCCTGCTGATCAGGCATTACAAAACCGTGCACAAACGAATGCCCACAAGGGACATGGTCCAGGCTAAGGGCGATAAGGTACTGGTAGAGCGTAGCAACATAGAGAAACTCTATTTGGATGGGATCAAAActccCATGGTCATGTGCGCCAAGTGTCCGTATGAGTGCGAGGCGGATGGAGAAATGCGAAAGCATTTGAATGCCCATCACGGCATAAATGATGGAATGTCCACTCATGCCAACGAGGTCTTCATGATACGCaAATTGCCGTTCGAGTGCCCGCGGTGTATTCGATCGTTTGCTGCCAAAGGCACGCTCACCCGCCACCTGCAGCGCAGCCATTTGGTGGACACCATTATTGAGATGCAAACGACGCTTTCGTCggctgccaccaccaccatcacaaCAACGACGGCCACTATAGCGGGGCCAGCAGGAGATAAAGAACCCTTTAAGGACgagatgatgacgacgacatCGACGGCTGCTGCAGGCAATGAACTGGGAGTAAACCAGGATGATGgaacagcagcgacagcagtaAGACGAGGGCGTGCCGTGCCAGAAGAAGATGTGGATCCGGTGACATTGGATGCAGCCACGGCGGCAACGACAGCTGCCATAGCAGCGGCAATATCCTCCGCATCCGCATCGCCCAGCGCATCAACAACAGCCTTGGCGCCTTCCGCATCCCATTTGTATCCCACTCCCACGCCATTTGATTTCGACTATGACCTAATGGGTAGTGATGCGCAGCGATCCCAGGTCTCAACACCCACTTCCAATCCCAACCTCGGATCGCCTGGCAGCGGTCTGCTTAATGGCAGTGACAAGCTACTGACAACCGCTGCCATGACGCCATTCCCGTCGAAGGATCTGCGCTCCAACAGGCGGCAGCCGCATAGTTCAATCTATGTATGCAAGCTGTGCAACAAGTCCTTCGACGAACTGGGCAAACTGGTGAAGCACGAGATGGAGATGCACTCCAATACAGAGCCCTCGCGATGGGGCTACCAGCACAAGTGTTCCATCTGCAGCACCAGTTACCGCACGCTGACACTGCTCAAGTTCCACATGAAGCGGCACATCAACCGGAATTCGCAGTGCAAGCTTTGCCCCAAAAGCTATGCCACCAGCGCGGAGCTGGAGAGGCACATGAAGATCAAGCATTGCCGCGAGAAGTTGATCGGCCCGTGTGGGTTAGATGGCTGTGGGAAGATGTTCGCTTTCAAGCATCATATGGTCAGGCATCAGAACGCCTCTCATCTGAAATCAACAAATCGCCATATCTGCGAGACTTGCAATAAGGAGTTAGTGAATGCTGCGGATCTGAGGTCGCACATGATTATGCACAAGAACATGTTAACCTTCAGGTGTCCCGAGTGCGATCGCAAATATTTGCGGCGCGGAAGACTTTTGAGTCATCTACTAAAAATTCACAAGAAACGCCTAAACGAGGAAGAGACAGCGGTCCTCTTCAGCGGCAATAAAGAAGACCCAAGCCCGCCACAAAGCCCTACGCAAAGTCCGCCCCAAAGCCCAAACAATCTGAAGATTATGACCCGCAAGGGGCAACTGGGATTCCGCAAGAACTTTGATGTGAATGAAACGGTGACCAACGAAGAGACGCATCCGGATGTGGAGCCTGCAGCGGCAGCTGGTCTTTCCAAATAG
- Protein Sequence
- MALSKRINPNTDALPGVSELNYKFACRCCLKSDAEFVKLESVSVARSLDPASEDDKVSLLRCLLYCVRAENAPELPQYICIECSKSLQVAYYFLQNAVRAHEILCRKLCPGKAWSTEGKRLNGAMGQRFQPSPSPKETATSLGDRTRPPKSMRQECQVCGEIFHSRMELKQHLRQHTDGISYQCKMCNFTTLKQRQLLDHYRCDHSMTPNQAEEHVKASPLPKSPIKEDEVKAVCTLEDMELLIPTVLTPEDYVQPTIDSEQLRDLEQQLAVSMGDAVTEVDSLTSTLPPMDTAHNVSIGTEYLVLPDGSLQQVNGGGVVIEYIDDSKPQQQPPPPPPPPPQHTPHINISLQNLLGPDENDAMDIDVNELIVEDMMTINKPTISTVLPNPAKPRPTVGVSQNFKHKCSICPRTFSSVPRLKSHQLTHSNLPKFFCDQCDFYSLRSVDLIEHYKTTHHRVDENGGTSQEPAQGSEETGVYSCDMCLFETRTCSQLRTHYTEQHEIQPTEVQLRPSWTNNGGNGTNNKEPPLSGRPEPADLPVAIKYPPLNADAQVPVQLQQQVQVQQQVQMQPQQVVVTTPTTLITQTSNHINVVVDTTPLFYASTTSSAVQAVPMPVQTMPGPVQAMPDPVQAMSDPVQAMSDPVQALPVQNTPVSVQVMPVMQPASENNSNAFEIQNPFPKIQPSNEQTEEPVTVEPISTANTSNISMFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEEFEEEDETVGEDEGEEEEEEEEEDEADNDDENDNNEAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVLVERSNIEKLYLDGIKTPMVMCAKCPYECEADGEMRKHLNAHHGINDGMSTHANEVFMIRKLPFECPRCIRSFAAKGTLTRHLQRSHLVDTIIEMQTTLSSAATTTITTTTATIAGPAGDKEPFKDEMMTTTSTAAAGNELGVNQDDGTAATAVRRGRAVPEEDVDPVTLDAATAATTAAIAAAISSASASPSASTTALAPSASHLYPTPTPFDFDYDLMGSDAQRSQVSTPTSNPNLGSPGSGLLNGSDKLLTTAAMTPFPSKDLRSNRRQPHSSIYVCKLCNKSFDELGKLVKHEMEMHSNTEPSRWGYQHKCSICSTSYRTLTLLKFHMKRHINRNSQCKLCPKSYATSAELERHMKIKHCREKLIGPCGLDGCGKMFAFKHHMVRHQNASHLKSTNRHICETCNKELVNAADLRSHMIMHKNMLTFRCPECDRKYLRRGRLLSHLLKIHKKRLNEEETAVLFSGNKEDPSPPQSPTQSPPQSPNNLKIMTRKGQLGFRKNFDVNETVTNEETHPDVEPAAAAGLSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00524667;
- 90% Identity
- -
- 80% Identity
- -