Dtru009067.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila truncata
Gene Symbol
RREB1
Assembly
GCA_008042515.1
Location
VNJQ01007874.1:25973-31946[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.03 2.6 8.8 0.8 1 21 261 281 261 283 0.93
2 12 0.00028 0.024 15.1 0.2 1 23 293 315 293 315 0.98
3 12 6.7e-05 0.0058 17.1 7.3 1 23 321 343 321 343 0.98
4 12 1.7 1.5e+02 3.2 3.7 2 19 560 577 560 579 0.97
5 12 0.0069 0.6 10.7 0.1 1 23 715 737 715 737 0.97
6 12 1e-05 0.00089 19.7 0.7 1 23 747 769 747 769 0.99
7 12 0.00068 0.06 13.9 2.0 1 23 775 798 775 798 0.97
8 12 0.0024 0.21 12.2 2.0 1 23 1078 1101 1078 1101 0.95
9 12 7.1e-05 0.0062 17.0 0.3 2 23 1490 1511 1489 1511 0.97
10 12 0.12 10 6.8 6.3 1 23 1517 1540 1517 1540 0.97
11 12 0.0069 0.61 10.7 0.5 3 23 1747 1767 1745 1767 0.96
12 12 0.0011 0.1 13.2 4.8 1 23 1773 1795 1773 1795 0.99

Sequence Information

Coding Sequence
ATGCTCGcgacacagcaacaacaacaacaacagcagcccggcagcagcggcaacaacaataacgtagccgccaccacacacacaaatatgaacaataataataacacagaCGTAGTTGAGATTGAACGAAAGCGCAGAGAGTCCACAACATCAGAATCCTCTCTCGAGCATCTCGACCTCGGTCGTACGCCAAAGAAGCTCAGCGGTAGCGCCGGTGCCGCACAGTCGACATCGACGCCCCACGAGGTGGTAACCACGTCGCGCAAGCGCAAGTTGCGCCAgctccaacagcagcaccaccaccagcaaaGTCGGCCAGATCTTCTGACcgatgaggacgaggacgaggaggaggcacGTCCCCTTAATCGGCACAAGCAGCGACGTGGCGCcatcgccgccgctgctgccgctcaaGGATCCTCCGCCTCCGCTTCCATTGTGGTGGACTACTCCACCGGCGATGCCAGTTCGCTGCGCAAGAAATTCCGTCTCAATCGCTCGGCGACCAGTCTCTCGGAATCGGGATTCGTGGACGCCAGCAGCACTGCCCACAGCGGCTATTTAGGCAACAATAGCAGTAGTGCCAGCACAAGCCTGGCAGTGCCTTCAGTTCCCACAGCCGCCGCCGGTGGAGCAGCCGCCTCCGCCTCGAGTAGCAGCACCAGCactagcagcaacagcagcagcattggcGGCGGTTCCGGTGGCTCCTCGCCGCAGGGCCTGTGCCTCTCCAGCGGCGAGTCGGGCATCGGGGCTGGTGACGAGCACATGAAATACCTGTGCCCCATCTGCGAGGTGGTCTCCGCCACGCCGCACGAGTTCACCAATCACATTCGCTGCCACAACTATGCTAATGGGGACACGGAGAACTTCACCTGCCGCATCTGCTCAAAGGTGTTATCTTCGGCCTCATCCCTGGACAGGCACGTGCTGGTGCATACGGGCGAGCGGCCGTTCAACTGCCGCTACTGCCACCTGACCTTCACCACCAACGGCAATATGCACCGCCACATGCGCACTCATAAGCAGCACCAGACGGcgcagtcccagtcccagtcgcaAGCCCAATCCCAACTGCAGCGCcgtcaacagcagcaacagcagacgCAGCAGTCTCATCCCgctcagcagcaacagcagcagccgctggcCAGCTCCTTGCCAGTGCGGGCGGAGAGCTATGAAAGCGATGCCAGCTGTTCCACTGATGTGTCCAGCGGTAAtagtcgcagtcgcagcagcagctccctccacaacagcaacaacaacaacaacaacaactcccaCAAGgctaccaacaacaacaggaacaGCAAGCATGAGCTGGATGAGTTGGATGAGCAAGAGCTGGAGGAGAACaaacagcaactgcagcgtCGCCTGAAGACCACCATTAACAACAATGTCATCGATGCAGAAAACCATGCCGAGGAGGATCTGAATGGTGAGGAGGAGGACGGAGACGACGTGGCCATGCTCACAAGTACACCTGATGTGGCCACGCTGTTGGCAGGAGCCAGTGCCTCCGGTGCTGCCTCTCGTtcaccatcgccatcgccaccaGGCTCGCCAGGGGTGCTCCTGAGTTGCCCCGCCTGCGGAGCCTCCGATTTCGAGACCCTACCTGCCCTGTGCGCCCATCTGGATGCTCGGCATTCGGATATACCAGCAAAGTGCCGGGACTGTGAGGTGATCTTTGCCAGCCATCGCCAGCTGCAGGCACACTGCTGCAGGGGATCTTCTTTGGGAGCGGGACTGCCGCCTATGCTGGGCGCCAGCAGTTCGCCTCTGCATGCCGACGAGGATGCCGAAGACGAGGACGAGGCGGATCACGAGGATGACGAGGAAATGGAGCAAGAGCGCGATGACTTCTTCCACAAGCTGTACCTCAAGGGAACATCGGGTGCAGCGCCGTCGCCCATTAAGCACGAGCCGGCGGACAGCAAGGATCTGGCCGATATTCAGAGCATCCTGAACATGACCAGCTCCAGCTGCACCAGTAGCTTCCTGCGCAACTTCGAGCAGTCGGTCAACACGCCCAGCTCCAGTCTATACAGCCTGGATGGTCGCgatcaggaggaggaggcccaGGATGCCTTTACCTCGGAATTCCGCCGCATGAAGCTGCGCGGTGAGTTCCCCTGCAAGCTCTGCACCGCTGTCTTTCCGAATCTACGTGCTCTCAAGGGCCACAATCGGGTGCACCTGGGAGCTGTTGGACCCGCGGGACCCTTCCGCTGCAACATGTGTCCCTACGCCGTCTGCGACAAGGCGGCGCTTGTACGGCACATGCGCACCCACAATGGCGACCGTCCGTACGAGTGTGCCGTCTGCAACTACGCCTTCACCACCAAGGCTAACTGCGAACGCCACCTGAGAAATCGGCATGGCAAGACCAGTCGCGAGGAGGTAAAGCGGGCCATCGTCTACCATCCCGCCGAGGACGCCGGCTGCGAGGACAGCAAGTCGCGGCTGGGTGAGGATCTGGCCGATATGAGCTTCCGCTCAATAAGTCcaacgccaccgccaccaccgccgccagtTGGTGAGAGCAGCAGCTCCCAGCTGAAGCACATGCTCATgggcgagcagcagcagcagcatcattcCCAGTCCCAATCCCTTCATAATCATCACCATCCGGTGGCGCCAGCTCAGCCGCCGTTAAAGATTCAGGTGAAGAGCCTCGACCAGCTGGTGGACAAGAAACCAGCTACAGTTCAACAGCCGGAGAAGAGCTCCTCCGCCTTAGACTTTAGCATGGATGTGTTGGATCTCAGCAAAAAGCCAACCGGTCCAGCAACGacgcccacgcccacaccCACGCCCTCGCTCACGCCGGCGCCCCTCGGTGCTTCTACTGTGGTTGCTCCGGCTGCCGATTTGGCCGCCGCTTTGGAGCAACAGCAGTTGCTACTGGCACAGCAGCAACTCTTCGGCGGTGCCGGCGACGCTGCCTCACAGTACATGCAGCAGCTGTTCCGCAGCCTGGTGTTCCAGTCCCAGACGCCGGGCTTCTCCTTCTTCCCGTTCATggctccaccgccgccggagGTGAGCCAAGAAAAGGCACCACTGGTGAGTCCTCCATCGCGTATAAACCCACTGCCCGTCGGCGTGGGCGTTGGTGTACCAGTACCGCCCGGCGGACCCGTTAAAATGGTTATCAAGAACGGCGTGCTGATGCCCAAGCAGAAGCAGCGTCGCTACCGCACCGAACGTCCCTTCGCCTGCGAGCACTGCTCCGCCCGGTTCACGCTGCGCTCTAACATGGAGCGACATgtgaagcagcagcatccgcaaTTCTATGCCCAGCGACAGCGGAGCGGTCACCATGTGATGAGGGGCAGGGGAGCGTCgaatgccgccgctgctgctgctgctgccgctgcagcggcTGCCATGGGTCCGGCGGTGGGTTCATCCCATCATCATGCTCACGCCCACAGCCACGGCCACGGCCACAATCACAACCACGGCCATGGACATGGGCATGCTCCCATCTCAGAGCAGGTCAAGTATGCCATTTTGGCGCAGCAGCTGAAGGCGCACAAGAATACCGATCTTCTGCAGCAGGCCTTGGCCCACGGCTCCAGCAGTGTGGCGGGCAATCCCCTTTTGCACTTCGGCTATCCCCTGGGCCCCGCGCCCGGTGCTCCGCATGTTAGCGGTCAGGGAAACGGTCAGGCGCCCATGGCAATGGACGATGATGAGCCCAAGCTGATCATTGATGAGGATGAAAATGACCACGACCACGACCACGAAGTGGAGCCGGAGGATGTGGATGACTATGAAGATGAGgaagatgaggaggaggacgagccCGAAGATGAGCCGGAGGTGATTCTAGATGAACCTCACGTTGTCGCTGTCATCGAAAAAGAGGAAGTagctgaggaggaggagctacCGAAGCCCCTGGAACAGCTCAGCACAATGTCCAAGACCAGTCCCAGCCAAAATGAGGCTGCCCAGAAGATGGCTGAGACCATCCTGGAACAGGCCATCAAGGCTGGCAAGCAGCCATCGTCTGCGACGACTTCGCCGTCCGCCGCGGTATCCTCCGTCCAGGAGGAGAATCCCCCAATAGCCGTAACTCCACCGGCTGCCATGCAGGAGCCCAGCACTAATCCCAGCAGCCTGAAAACCATGATAGCCCAGGCTGAGTCCGTCGGCAAGTCGCTAAAGGAAGTGGCGAGTTCACCGTTCAAGGACGACTCCCAGGACTTGGTGCCAGTGGCCAAGCTGGTGGACAACGCCACCAGCCAGAACATGAGCTTCAACACCTACTTCCGACCCAGCGATGTGGCCAATCACATGGAGCAGAGCGACGAAGAGGGCCTAGTGGCCTCCGGTAGTGCCAGCGAGAGCAACAACAGTGGCACAGAGGACGTCACCAGCTCCAGTTCGAGCAGCGAGCCAAAGAAGAAGTCCGCCTACAGCCTGGCCCCGAATCGCGTCTCCTGTCCATACTGCCAGCGCATGTTCCCGTGGAGCAGCTCCCTGCGCCGCCACATTCTCACACACACCGGCCAGAAGCCCTTCAAGTGCTCGCACTGCCCGCTGCTCTTTACCACCAAGAGCAACTGCGACCGCCATCTGCTGCGTAAGCATGGCAATGTCGAGTCCGCCATGTCGGTCTATGTGCCCACCGAGGATGTTAGCGAGCCGATACCGGTGCCCAAGTCCGTGGAGGAGATCGAGTTGGAGGAGCAGCGTCGCCGCCAGGAGGCGGAGCGTGAAAGGGAGCGCGAATTAGAGCGCGAGCGTGAGCTGGAGCGTGAGCGTGAGCTGGAGCGAGAACGTgagctggagaaggagaaggagcgcGAGCGTCAGCAGCTCATCCATAAGCTGGCCGCCCAGATGagtgccgccgctgcagctgctgctgccgctgccgctgtctcATGTGCCTCGCCGGGTAATGGATCCTCTGCCGTAGCCGGAGCCGTAGGCGATCTTTCGGCCGGCGGTGATCTGCCGTACAAGTGCCACCTGTGCGAGGGCTCCTTTGCCGAGCGCCTGCAATGCCTGGAGCACATCAAGCAGACCCATGCCCACGAGTTTGCCCTGCTTCTGGCCAAGGGAGCCATCGAGAATGAGTCGCTGCACTCCAACGATTCCTCAAAtccccagcaacagcagccacaacacCAACACTCGGACGACGAGGCAACTAATGGCCTGGGTCGTGGCAAATATCCGGATTATAGCAACCGAAAGGTTATCTGCGCCTTCTGTGTGCGCCGTTTCTGGTCCACCGAGGATCTTCGGCGGCACATGCGCACCCATTCCGGCGAAAGGCCTTTCCAGTGCGACATCTGCCTGCGCAAGTTCACCCTCAAGCACAGCATGCTGCGTCACATGAAGAAGCACAGTGGACGGGCCCACAATGGGGATACGCCCGGCTCGGATTGTTCCGACGATGAGCAGGCGATGAACAGTCCGCCCGGTACTCCAGTTCCCTCTCCTATGCCCCTCCCCTCCagcgccaacaacaacaacagctgccagaataataacaacaacaataataatagcaataataataataacaataacaacaacaagctcGGCCTGAAGCTCCCTAAGCTGCACGAGCTACTGGACAAGGCGAACGAGTGGCGGGCGAGCCGGCTGGGCGAGCACAAGGAGAATCTGGGCGAGGCAACGCCCTctgcagcagtggcagccgGTTCGGATCTGATTGGGAACCTTCTGGGGATCAGCGATCAAGGCATACTCAACAAGCTGCTGTCCTCCGCCGATGAGGCGGCCAAGCTCCTGGGCGTGGACAACAAGTGA
Protein Sequence
MLATQQQQQQQQPGSSGNNNNVAATTHTNMNNNNNTDVVEIERKRRESTTSESSLEHLDLGRTPKKLSGSAGAAQSTSTPHEVVTTSRKRKLRQLQQQHHHQQSRPDLLTDEDEDEEEARPLNRHKQRRGAIAAAAAAQGSSASASIVVDYSTGDASSLRKKFRLNRSATSLSESGFVDASSTAHSGYLGNNSSSASTSLAVPSVPTAAAGGAAASASSSSTSTSSNSSSIGGGSGGSSPQGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQTAQSQSQSQAQSQLQRRQQQQQQTQQSHPAQQQQQQPLASSLPVRAESYESDASCSTDVSSGNSRSRSSSSLHNSNNNNNNNSHKATNNNRNSKHELDELDEQELEENKQQLQRRLKTTINNNVIDAENHAEEDLNGEEEDGDDVAMLTSTPDVATLLAGASASGAASRSPSPSPPGSPGVLLSCPACGASDFETLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGSSLGAGLPPMLGASSSPLHADEDAEDEDEADHEDDEEMEQERDDFFHKLYLKGTSGAAPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPSSSLYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDSKSRLGEDLADMSFRSISPTPPPPPPPVGESSSSQLKHMLMGEQQQQHHSQSQSLHNHHHPVAPAQPPLKIQVKSLDQLVDKKPATVQQPEKSSSALDFSMDVLDLSKKPTGPATTPTPTPTPSLTPAPLGASTVVAPAADLAAALEQQQLLLAQQQLFGGAGDAASQYMQQLFRSLVFQSQTPGFSFFPFMAPPPPEVSQEKAPLVSPPSRINPLPVGVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAAMGPAVGSSHHHAHAHSHGHGHNHNHGHGHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLGPAPGAPHVSGQGNGQAPMAMDDDEPKLIIDEDENDHDHDHEVEPEDVDDYEDEEDEEEDEPEDEPEVILDEPHVVAVIEKEEVAEEEELPKPLEQLSTMSKTSPSQNEAAQKMAETILEQAIKAGKQPSSATTSPSAAVSSVQEENPPIAVTPPAAMQEPSTNPSSLKTMIAQAESVGKSLKEVASSPFKDDSQDLVPVAKLVDNATSQNMSFNTYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAERERERELERERELERERELERERELEKEKERERQQLIHKLAAQMSAAAAAAAAAAAVSCASPGNGSSAVAGAVGDLSAGGDLPYKCHLCEGSFAERLQCLEHIKQTHAHEFALLLAKGAIENESLHSNDSSNPQQQQPQHQHSDDEATNGLGRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEQAMNSPPGTPVPSPMPLPSSANNNNSCQNNNNNNNNSNNNNNNNNNKLGLKLPKLHELLDKANEWRASRLGEHKENLGEATPSAAVAAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-