Basic Information

Gene Symbol
Ubp1
Assembly
GCA_008042515.1
Location
VNJQ01007941.1:11404-22759[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.9e-54 4.6e-50 170.0 0.2 22 187 274 436 254 444 0.91
2 2 1.2e-13 1.1e-09 38.0 1.5 186 222 484 520 480 521 0.92

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTATCGCAAAACTCCGGTCTTGTAAGTGAAAATCTAAATCAGATCCAGAACCGCCACTTCATCAGCGGCTACCACCATCAGCATATTGGGTCGGATTATGAGCAAGTGATCAACTTTGTTGACTCGCCGCCAAACTCTGAGGAATCGTGGACAGACGCCCAATCGAAGGACTCGCCGGGACCGCAGATCATCGACGTGCAAACCATTTACCTGAACAGCGGCTCACGCAAAAGACGAATGGATTGGGATTCCCTGGACATTGGCCAAAGTGAGAACTCACCAACAGCATCGCAGAGCGGCGAGCTGCCCACCAAAGTGGCCCACCAGGAGAAGGATAAACACAAGCGCGAGAAGAACTCGGGTCGCAGCAGCTGGAGCGATGATATTGGCTTCGATCTGAATGCTGAGTTCAACAGCAACTCGTACTTGAACAAtGAGAACTTCCTGTCGTTCTCGCCCACGCTGACCACCCTGAAGCAGGAGCCGCAGACGGATCAGATCAAGCCCAGTCCCAAGATATCTTTGGATAATGCCGCTGGTTCTCCGTCAGTGGCCATTGCCAAGCTGGATGAGTCCCAGAACTCTCCGCAGCAGGCTAATCCTGGTCAGGAAACCACTCCggccaatggcaatggcaagcTTGATGTGAACTCAGGCCTCGCTTGCGGCTGTGGTTCCCCGCAGGGCTCCCCCTTGGCCAGCAGCGAGTATGAGGTGAACGAGAAGGGTGCAAAGGTCcatccccagcagcagcagctcagcgTTTTGGATCCGGCCAAGATTGAGCTTGTTTCGGCCAATGGAGCTACCCACTCCGAAGATCATAAATTTCAGTACATCTTGGCTGCAGCCACTTCGATTGCCACCAAGAACAACGAGGAGACCCTGACGTATCTCAACCAGGGCCAAAGCTACGAGATCAAGTTGAAGAAGATCGGCGACCTGTCCCTCTACCGGGATAAGATATTGAAGAGCGTGATTAAGATCTGCTTCCATGAGCGCCGCCTCCAGTTCATGGAGCGCGAACAGATGCAGCAATGGCAGCAATCCCGCCCAGGCGAACGCATCATTGAGGTGGACGTACCGCTATCGTATGGCCTGTGCCACGTGTCGCAGCCACTCAGCTCCAACTCGCTTAACACCGTCGAGATCTTCTGGGACCCCCTGAAGGAGGTCGGCGTCTACATCAAGGTCAACTGCATTTCAACCGAATTTACCCCAAAGAAGCACGGCGGCGAGAAGGGAGTGCCCTTCCGACTGCAGATTGAAACCTATATAGAAAACACAAACAGCACCAATACCGGCCTAGGATCtgccggcagcagcaacaacaccgccagcaacggcggcagtggcaacagcagcaacggcagtgGCACAACCAGCGGCTCCACAGCTCCAGCATCACCGGAACGTTCGCCAAATGGCGGCGGACAGGCCAAGCAGGCGGTCCATGCCGCTGCATGCCAGATCAAGgttTTTAAGCTAAAGGGCGCTGATCGCAAGCACAAGCAGGATCGTGAAAAGATCCAAAAGCGTCCACAATCGGAGCAGGAGAAATTCCAGCCCAGCTACGAGTGCACCATCATGAATGACATATCCCTGGATCTAGTGATGCCCGCCACTACCACTGGCTGTTACAGTCCCGAATATTTTGTACAGTGCGTTTCGGGGCCCTACGGAGGGGGTTTAAGATCGTCGCTCCTGCCAACGTCAGATACTCAACGAGCTATATTGGATTTTATGAAACTCTGGCCCAATTCGCCCGTACATATACCCAAGTACGATGGGATACTTCCGTTTGCCCCAAGTGCAGCTTCACcggccaccagcagcagcagccccattGCCATCAACTCGGTGACGTCGACCAACTCACCGACTCTGAAGCTAATGGACGCCACCAATATGGTCTCGCCGCAGCATGTGCCCGCCGACATGGACGACTATAACCAGAACATTATGCCGGAATCGACGCCAGCTCAAGTGACGCAGTGGCTGACCAATCATCGCCTTACGGCCTATTTATCAACGTTCGCACACTTCTCGGGAGCAGATATTATGCGcaTGTCCAAGGAGGATTTGATACAAATCTGCGGCCTGGCCGATGGCATTCGCATGTTCAATATTTTGCGCGCCAaGACCATTGCGCCTCGTCTTACTTTGTACGCCAGCTTGGATGGCTGCAGCTACAATGCCATCTACTTGCTGTCGAACACGGCCAAGGAGTTGCAGCAGAAGCTGTTTAAGATGCCAGGTTTCTATGAGTTTATGGCCAAAGCCAGTGCCCAGGAGAATGGAGGAGGCGGAggtagtgctgctgctgcagctgcggcTGCCCTGTACAATAACTGGAGCATGCACTCGAAGTACTCGGGCAGCGGCTCGAACATCTTCAATGATGCCAACAAGAGCTGCGTGTACATCTCGGGGCCATCGGGCATTTTGGTCAGCGTCACCGACGAGGTGCTTAACAACGAGATCAAGGACGGCAGCCTCTACGCCATGGATGTGCAGGCCGGCAAGGTGATCCTCAAGCTGATCAACAAGCAGGACAACAATTGA
Protein Sequence
MALSFLSQNSGLVSENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDAQSKDSPGPQIIDVQTIYLNSGSRKRRMDWDSLDIGQSENSPTASQSGELPTKVAHQEKDKHKREKNSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPTLTTLKQEPQTDQIKPSPKISLDNAAGSPSVAIAKLDESQNSPQQANPGQETTPANGNGKLDVNSGLACGCGSPQGSPLASSEYEVNEKGAKVHPQQQQLSVLDPAKIELVSANGATHSEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNSTNTGLGSAGSSNNTASNGGSGNSSNGSGTTSGSTAPASPERSPNGGGQAKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLVMPATTTGCYSPEYFVQCVSGPYGGGLRSSLLPTSDTQRAILDFMKLWPNSPVHIPKYDGILPFAPSAASPATSSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESTPAQVTQWLTNHRLTAYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASLDGCSYNAIYLLSNTAKELQQKLFKMPGFYEFMAKASAQENGGGGGSAAAAAAAALYNNWSMHSKYSGSGSNIFNDANKSCVYISGPSGILVSVTDEVLNNEIKDGSLYAMDVQAGKVILKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489142;
90% Identity
iTF_00491278;
80% Identity
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